Array 1 746952-746312 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RQIV01000001.1 Verrucosispora sp. FIM060022 scaffold1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    746951	    28	 100.0	    33	............................	CGATCAGGCCGCTCGACGACGACGAGTGGGAGC 	
    746890	    28	 100.0	    33	............................	CTTGGCCCGGCCGCCGTGCACCTCGTGCCGCAG 	
    746829	    28	 100.0	    33	............................	GAGAAGGCGGATGGGTGACATCTCCGGCGACGG 	
    746768	    28	  96.4	    33	....................A.......	CCCGAGGATGATGCCGGAGCGGAAGTAGCCGTT 	
    746707	    28	  96.4	    34	.....................A......	CCGGCTGTACGACACTGCGCGGGAGGCGTTCGCG	
    746645	    28	 100.0	    34	............................	CCATTCGGCGCCCACTTTCGTACTCAGCGCACGG	
    746583	    28	 100.0	    33	............................	CCGCCCGGCACCCATGACGGAACCGTGAACGAC 	
    746522	    28	  96.4	    33	.............G..............	CGTACAGCCGACGTACGTGGCGGGCAAGACCGT 	
    746461	    28	  96.4	    34	...................A........	GAGCACGCTGGGTCGGGGCGGCGCCGGACATCGT	
    746399	    28	  78.6	    33	.A......T.T.A.G......A......	CACAGCGACCGACCACAAGCGAGCGCCTCTGAG 	
    746338	    27	  75.0	     0	.....T.....-..T.GA...CC.....	|                                 	
==========	======	======	======	============================	==================================	==================
        11	    28	  94.5	    33	CTGCTCCCCGCGCACGCGGGGGTGATCC	                                  	       

# Left flank :   CGACCACCCGCGTGCGGCGCGTTCGGCGCGTAACCGAGCAGCCCAGACGGGCCGGTCATCCGAGGCGTCAAGACCATCTGCCATGGCTCTCATTATCGCTCTTTTTCGGGTGGTGGCACCGGGGGACGTGCGGGTGTCACCGCAGTGACATCTGTAGTTGGAGACGAATCAACGAAAACGTTGAAGCCCGGCTCCGGTTATGCCTCGCCGCGAGGCTCAACGAGTTGGATCGGCAGGCACGGAGTCGAGGGGCTGAGGCGATGAGTGTGGCGCCATCGGATTGTTCGACGGAGAGCTGACATGAACGTGATCGTTACCGGCGTTGTCGCGCCGACGACCGGATCGGCGGATGCTTGCCCGGCCACAGAGCCTGTACGCTGCCCTCAGCCCTGGAACGGAGTACGCGCCACACCTCCGAACACCATCCCGGGAGAATGATCTTGCAAAGCAAAGTGAACAAAAACAGCGGACTTGATCTTTAGAACAGCAGGCCAGGAAGC
# Right flank :  CACACGAGGGACGGCACAACACTTCCTACCGCGCCCAGGCGCATCAAGCTGGCCTTGCTGCCACAGTTCCCCGTGTCGTGGGGAAGTTCCCTACCGAAAGCCGGATGCGTAACGTCTGAACGGGAGGCGTCAATAGGTGCGGCTGGATCGGGGATGGTGGCGTGTCCGAGGGACGGTCGGAGAGTCTGCGCCGGCAGCAAGCGTGCCTGGCTGCCGAGTTGCGGTCGGCGGGAAAGACGTGGGTTGAGGCGGCCGAGGTTTTCCAGACGAGGTTTCGGCTGAATCCACGGGTGGCGTTGCGGGCGGTGCGGGGGTGGAGCCAGGCGCAGGCGGCCGAGGAGTGGAATCGGCGTTGGCCGCACGAGCCCAAGACTTTCAAGAATTTCTCGTACTGGGAGATCTGGCCGGGCAAGAGCGGCCACTCGCCGTCGCAGGACAATCTGGTGCGGCTGGCTCAGATCTATGAGTGCAGTGTCGCTGACCTGCTGACCGACCTGCCC

# Questionable array : NO	 Score: 5.77
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGCTCCCCGCGCACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [15-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-C/E [Matched known repeat from this family],   
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