Array 1 28674-31825 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASFN01000054.1 Acinetobacter baumannii TG22148 AB_TG22148_55, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 28674 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 28734 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 28794 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 28854 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 28914 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 28974 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 29034 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 29094 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 29154 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 29214 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 29274 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 29334 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 29394 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 29454 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 29514 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 29574 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 29634 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 29694 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 29754 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 29814 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 29874 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 29934 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 29994 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 30054 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 30114 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 30174 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 30234 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 30294 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 30354 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 30414 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 30474 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 30534 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 30594 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 30654 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 30714 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 30774 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 30835 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 30895 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 30955 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 31015 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 31075 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 31135 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 31195 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 31255 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 31316 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 31376 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 31436 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 31496 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 31556 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 31616 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 31676 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 31736 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 31796 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 191751-188599 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASFN01000020.1 Acinetobacter baumannii TG22148 AB_TG22148_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 191750 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 191690 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 191630 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 191570 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 191510 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 191450 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 191390 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 191330 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 191270 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 191210 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 191150 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 191090 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 191030 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 190970 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 190910 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 190850 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 190790 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 190730 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 190670 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 190610 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 190550 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 190490 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 190430 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 190370 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 190310 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 190250 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 190190 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 190130 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 190070 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 190010 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 189950 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 189890 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 189830 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 189770 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 189710 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 189650 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 189589 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 189529 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 189469 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 189409 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 189349 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 189289 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 189229 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 189169 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 189108 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 189048 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 188988 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 188928 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 188868 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 188808 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 188748 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 188688 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 188628 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //