Array 1 772773-768724 **** Predicted by CRISPRDetect 2.4 *** >NC_017080.1 Phycisphaera mikurensis NBRC 102666, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 772772 32 100.0 34 ................................ TCCAGCGAGGCCGCGAGCGACTACGGGTTGGTCT 772706 32 100.0 34 ................................ TGTCCGGCACGCGGCGGCCGGAAGGTCGCATACC 772640 32 100.0 36 ................................ TTCGGGGTGACGAACGGCGACTGGTACGAGATGCGC 772572 32 100.0 34 ................................ GCGTCGGCGTGGGCGGTGGGATGCACCTACAGCC 772506 32 100.0 33 ................................ CCGCAGGTTGAGCGAGGAATGGCACGCGATCAC 772441 32 100.0 35 ................................ TCGGCGGCGTCGAGAGCCTTGTCGAGAGCAAGAGG 772374 32 100.0 33 ................................ TGACGATGGCGGCGCGGAAGACGATGGCCCCTC 772309 32 100.0 34 ................................ CGGTCCCGGACGACGACGACCTGGACGCATGGGC 772243 32 100.0 34 ................................ TCCAGCGAGGCCGCGAGCGACTACGGGTTGGTCT 772177 32 100.0 32 ................................ GTTTTCCGCGACGGATCCAGTTACGCGCCCGG 772113 32 100.0 33 ................................ TCTCTCCGGCGCTCCGGCGCCATCGTGGCCCCC 772048 32 100.0 33 ................................ AGTCTCTGAGCCGGCCGATGGTGCCTGGTACTG 771983 32 100.0 34 ................................ AAGCCGCCGGCGACCGGTGTAGCCGCGGGCGGGG 771917 32 100.0 35 ................................ ATGTCCACCGATCGGCCGGTTCCGCGGACCGTGGC 771850 32 100.0 33 ................................ CGCAGGCGGGGCAGGAAGTCGCCCATCCGGGCC 771785 32 100.0 33 ................................ AAGCGGTCCCCCGCTCACTGGCCCTTGGGCCGG 771720 32 100.0 34 ................................ GCCCTGTAGATCGTGGTCCACCAGCGCTCGGCCC 771654 32 100.0 35 ................................ ACGATGCTGGTTCCGTGCTCCAGCTGGTCCGGGAG 771587 32 100.0 34 ................................ CCAACCCCGGGGCTCATGGCCGGTCCGGGGCGGG 771521 32 100.0 34 ................................ CGTCAACCTCGCGCTCACGCATCTCCCACGCGTG 771455 32 100.0 33 ................................ AGCGGCCCGCCGGGCCGCACCTCCCGCAGACGC 771390 32 100.0 34 ................................ AAGCCGCCGGCGACCGTTGGAGCCGCGGGCGGGG 771324 32 100.0 34 ................................ TCTGACGTCACGCCCTCCCCCCGCACCCGCACGG 771258 32 100.0 34 ................................ ACGAGCGCGGACGAGTCGGCGGCGTTCGAGTTCG 771192 32 100.0 33 ................................ ATCCGCGGGGCGTTCCGCCGCGGGGGTGAGCAG 771127 32 100.0 34 ................................ ACCGAGCCCGGCGGCGGCGACCTGCCCGGCATCC 771061 32 100.0 35 ................................ CACCGCGTGAACACGCCCAGCCGCGGCCCCTGGGG 770994 32 100.0 33 ................................ CGTCTGGACCGCCGAACTCGACCGGCGCCTCGG 770929 32 100.0 35 ................................ CAGCTGGGGGGCGAGCACCTCGCCGACGGTCTGAT 770862 32 100.0 35 ................................ TCGGCCACCGACCGCAGAGGCCGCCCCAGCAGCTC 770795 32 100.0 33 ................................ ATCGCCGACGACATGGCCGGCGCCCACGCCCTG 770730 32 100.0 35 ................................ GCCCGCCCGGGCGAGACGCCGACGTACCTGCCCAC 770663 32 100.0 33 ................................ ATCCGCGGAGCGTTCCGCCGCGGGGGTGAGCAG 770598 32 100.0 34 ................................ GCCTGGGGCGACACTTGGTGGCGGCCGCTGGGGC 770532 32 100.0 36 ................................ AACGAGATGGAGTTCGCGCAGCTCAAGCTGATGAGC 770464 32 100.0 34 ................................ ACCACGACGGACGCGGCGGCGACGATCCCCGAGG 770398 32 100.0 33 ................................ CCGTCGCGGGTGGTCGACGGGATCACGATGTTC 770333 32 96.9 34 T............................... TCGGTGAACGCCGAGACGCGGACGATCCACGGGG 770267 32 100.0 34 ................................ TCCTCACATCGACCGCGGGTCGGTCGCACCCCCC 770201 32 100.0 33 ................................ TCGGCGTCTCGGGTCCCTAGACCGCCGCTGGTG 770136 32 100.0 33 ................................ CGCTCCAGCCCCTTCTTCTCCTCACATCGACCG 770071 32 100.0 33 ................................ GACGCCGGCCGGGTCGGCACTCGGCGCCGCCGC 770006 32 100.0 33 ................................ GGGTACGTAGTCAAACGACGCTTCCCGGAGTTG 769941 32 100.0 34 ................................ ACGAAGGCGCTCGCGGCGAGCGGCGTGGACCGCG 769875 32 100.0 34 ................................ ATCGACTCGCGCAAGGACTTCGACGCGATCCGAG 769809 32 100.0 34 ................................ AGTCTGAGCCGGCCGATGGTGCCTGGTACTGAGG 769743 32 100.0 35 ................................ GCGACCCTCACCTACGACCCGGTTTCTTGGCTGCC 769676 32 96.9 34 ......................A......... GATCTCCGAGAGAAACGCCTCGACCGCCTCGAAC 769610 32 100.0 34 ................................ AACTGTTTCGAGGTCGAGGCGGACGCCGGCTTCC 769544 32 100.0 34 ................................ AGGAGCCCCCGATGCACAGCATCAAGATCGACCG 769478 32 100.0 34 ................................ ACTCACGGATGCAAGAGCGCTTCCCGTTGCTCAA 769412 32 100.0 33 ................................ ATAAGCAACGCGACAAAGAGAAGCGGGATTCCG 769347 32 100.0 34 ................................ GCAAAGCCTCGCGGGCAACGCTCCACGTAGACGT 769281 32 100.0 33 ................................ CGGTTATCGCGCCGCTGATCGACATGATCCCCG 769216 32 100.0 36 ................................ GCCAGCACCGGGGCCAGCACCGGCGGCGGCAGCAGC 769148 32 100.0 34 ................................ GCCGGGTCGAGGTCCTTCCGCGGCGGACCCTGCC 769082 32 100.0 33 ................................ AGCGAGCACAAGACGATCGGCGTCGACAAGGCC 769017 32 100.0 33 ................................ CTGCAGGCAGCGGGTCGCTTGCGGCGGCGGCGG 768952 32 100.0 33 ................................ GCTTCGATGCCGGAGGAGGTGCGGCCGGACGGA 768887 32 100.0 34 ................................ TTCTGGCCAGCCGTCAGCTCTCGCAGCGCTTCGT 768821 32 100.0 35 ................................ ACCCTGCACCATGGCAACCCGCTCATGGTGGACCA 768754 30 87.5 0 .....................--..G.....A | G [768727] ========== ====== ====== ====== ================================ ==================================== ================== 62 32 99.7 34 GTCGCCCGCTCCACGCGGGCGTGGATCGAAAC # Left flank : ACGCAGACCATGATGGTGCTCGTGACCTACGACGTGGCGACGAGCACGAGGGCCGGCGTCCGCCGCCTCCGCCGCGTCGCCAAGTGCTGCCTGAACCGCGGCCAGCGCGTGCAGTACTCGGTCTTCGAGTGCGAAGTCGACCCCTCCGAGTGGGTGGAGCTGAAGGATCGGTTGGAGAAGATCATCGACCCGAAAGTCGACAGCCTCCGCTACTACTTTCTCGGCGCCAACTGGCAGCGCCGCGTCGAGCACGTCGGCGCCAAGGCCGCCGTCGACCTCAACGGCCCCCTCATCGTCTGATTCCGAGGCCCGCCCCCTCCCTCCGCGAACCCGCAGCGCGCACCCGCACCCGGGTGGGTTCGCGAAGCCCCCTGAGCCGCTCTCTGACAGCCAAAGAGTCCCCTCGCCCCCGCCGCCGGCTCGACTCCGGCCGCGCGGGCACCGAGGTTCGCGGAAACGCGTCCTCAAACTCCGCCTGAGCCACCGCTTAGGATGGAGCC # Right flank : GGTGACAGCCACCGATTTCGCCGATTTCGGCCTCGATCTCGGCCGCGCCCGAAGCCGACCCTGGGGTCGGCACTGGTTTGGGGGGCGGCCTCGGGCTTGAGGTCCGCATCTGAAGGCGTGAGGTCGCCTGGTCAGCTTGCGTGAGGCCGGCACCACGTGAGGCAGGATTGGACTGGGGAGCGGAGGGTGTCGACGCCTTCGCCGCCGCCTACTCCCGGCGCAGCTCGACGTCGTCGATGCGGACGTCGCCGCCGCCGCTCCAGAAGTCCAGGCGGGCGGAGGTCACGCCGGGGCCGGTGGTGAAGGTCAAGCTCTTCTGGTTGTAGCGGGTGCCGCTGTTGGAGAGCTGCTCGACGCCGCCCCAGCCGGTGGCCTTCATCACGGCGTTGCCGCGGATCCAGGCGGTCATGCGGTAGGTCGTGCCCGGGACGAGCCCGTTGACGACCGTCCAGATGCCGTTGGTGCTGCTGTTGCCCAGGCGGGCGGCACGCCTGCCGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCGCTCCACGCGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.20,-8.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //