Array 1 479-183 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPY010000039.1 Anaerostipes hadrus strain MSK.6.11 NODE_39_length_12636_cov_217.173, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 478 30 93.3 36 C.....G....................... CAAGCTTTCAAGAACTAAATCTAATAAACTTAACTG TAA [460] 409 30 100.0 34 .............................. CACTTAGGAAACTACAGGACAGCCTGATTCCAAG 345 30 100.0 38 .............................. TGGCGGAACTGTATAATGTTTAGAAAGGGGTGTAGATA 277 30 100.0 35 .............................. GAAATCCAAAAAAAGATAGTAAAGGCGGTAGAAAA 212 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 98.7 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCAAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATTGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAATTGAACAACTACTCAACTATTATTATACTTATTTTTAAATTTATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTCTGAACCGCTCCCCGTCAAGTAGACAATTGAAAAAATATAAATTTTTCCTGCCAGT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 114559-115763 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPY010000006.1 Anaerostipes hadrus strain MSK.6.11 NODE_6_length_164590_cov_146.082, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 114559 30 100.0 36 .............................. CTGTCTTTTTTATGCTTTTGATAGTACAACAGATCA 114625 30 100.0 36 .............................. TCTGTTACTTCTTTTTTCTTTGGTTCTGTCTGAATT 114691 30 100.0 36 .............................. AACAGAATGTAATATTTCCACAGCTTATGTGGAATT 114757 30 100.0 36 .............................. ACGATTATTCCTTGAAGCTCAATTCGTTCATCAAGC 114823 30 100.0 35 .............................. TAAGTTAGCATTTTGGATTGACCAGGGGCTAAAGT 114888 30 100.0 35 .............................. TTTTTTCTTGGCATCCTGCAAGGGTGTATTTTTTG 114953 30 100.0 36 .............................. AGGTTCGCCGCTATCTTTTGCTGGGCACTCTGCATA 115019 30 100.0 36 .............................. AGGATGTGGGGTAAAACTTATGAAAAACATATTATT 115085 30 100.0 34 .............................. AGTTTTAGGAGTGATTATATGAAATGTGCTTGTA 115149 30 100.0 35 .............................. CGAATTAGAAAAAAGAATTGAAGAGATATTTAAAA 115214 30 100.0 34 .............................. AATATTTCTACCATTTTTATCTCCTTTTCTACCC 115278 30 100.0 36 .............................. ATAGATATGAGAGTAAACAGGGCGATACATGGTATC 115344 30 100.0 34 .............................. GTGTTCATCTTCCCACCGTTCGCTCTCCAGTTGA 115408 30 100.0 37 .............................. GAAATACGTTTCCAAGATCCCATCTTGTATTATCGTA 115475 30 96.7 34 ..............A............... AACATATTATGAAGAGCATATCGGTAGCAGGGAA 115539 30 100.0 35 .............................. TTTCTTAGATTCTGGTTCACTTTGTGGCGGAACAT 115604 30 100.0 36 .............................. TACAGAAAAGACGAAAGACCAGACACGTACAAAGAG 115670 30 100.0 34 .............................. CGTATCAGAATCACGTCGCCCAACATGGAATTGG 115734 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 99.8 35 GTTAAACAATAACATGAGATGTTTTGAAAT # Left flank : GATGATAATAGTTGGAGCATGGATATTGTTTTGTGTCGTAGACTTGAATTAGAAGATGGAACTGTTTTAGATGGCGAAGAAGTTTGGAATGAATACAAAAATATATTGGAAGATTCAGATATGGAATATGCAAAAAAGCAGATAAAACTTTCGGTTGCTCGAAGCAATCTTAAATATTTTACATATAGAATCAAAAAAAATTCAGATTTAATATATAATGATATTTTAGGAGAACTTCGATGTATCTATGATGGAGAACAATATTTTGAAAACGGAAAGTTAAACAAAAAGTTGTTGGAACAATCAGGAGGATTATTTATTGATATTTAAAAGTACAAAATTTTACCAAGTGATTTCCAGAAAAAGTGTTAGAAATGGCTGAAATATGTACTTTTTTAGAAAAACAGTAAATTGAGGGGGCACTTGGAAAAAATAATGGAAAGGTACATAAAATCGTTGTTTTTTTAAAAAGACCATTAAAAAATGACGTAAAATCGTTG # Right flank : TACCTCTAAGGTCGGGGATGAATTCGCTCTCGCCATTAGTTAAACAATAACATAAATTTATAAGCACATTTGATTAATTTCTAATTTTAAGGAGGAGTCTATGAGAGTTAATGGAACATTAATCAATTATTATTTCCATTGTAAAAGACAGTGTTATTTACATGGAAATAGGTTGAATCTTGAAGATAATAGTGAAATCGTACAAATTGGAAAGGCAATTCATGAAGAACGATTACAAAGTTCGAACAGTGAAATAGCAATTGAAAATATTAAATTAGATAAATTAACAAAAGAGTATTTAACAGAGGTAAAAAAATCAGATGCTGATGTAGAAGCAGCAAAATGGCAATTATTATATTACCTAAGTGTTTTAAAAAATAAAGGAATTTATCGAAAAGGGAAACTAGAATTTGTTGAAAAAAACAAATCTAATAAAAAAGTAGTAATTTTGGAATTAACAGAGGAGAGGGAGAATGAATTAAAAAAAATTATTGAATCAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAATAACATGAGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 150132-150364 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPY010000006.1 Anaerostipes hadrus strain MSK.6.11 NODE_6_length_164590_cov_146.082, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 150132 36 100.0 30 .................................... TGTACAGTAGCTCTCCAATAAGATTTCGCA 150198 36 100.0 30 .................................... ACTAGAATCATTTTGATTATATTCATGATA 150264 36 100.0 30 .................................... TGGCTAAAACAAAAATAATTCAATGTCAAC 150330 35 77.8 0 .................-.......TT..A..TGGA | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 94.5 30 CATTTGGAATCATTTGCTTTTACATGGTTCCAAAAC # Left flank : TTGTTGATTTTTTGTTTTCCTTTTTTTTAGATTTTTCTTTTTGTTTACTTTTCTTTTTTCCATCTTTTTTAGTATTTTTCTTTTTTGTTTTCTTATCTTTTTTAACTGTTTTTTTCTTATGATGAGTTGTTTCTTTTTTTTCTGTCGTAGTCGGCTTCGTTTCTGTTGTTGTAACTTCTGTCGCAGCAGTTGTTGGTTCTGACACCTCATCTGCATGTACAGGAGTGATCGTTGCCATCATAAGTGTAACAAGTAAAAAACTGACTACTTTTCTTCTCAATTTATCATCACCGACTTTCTTCATTGCCATATTTATAACTTTCATTTTCATGCAAAAAGCTGATCAATAGACAAAATACAAAAACATAAATTAATATTATGGTAACAACAGTTATTATTGATCAGCTTTTTCAGTTTTTTTCTGCCACCTGGCAGATTCCATTTATATAGATCTATTCGATAAGTTCTTATTTTGACACACCATGTAATCTGCTTTTGAC # Right flank : ATTCAAATCCACATTGACAACATAATTTAAGCATTTCACTATAAATTACTCCTTTACTTGAAAAACATCACTAATAAAATGGGAGATAATTCCCTCTTCAACACATCCAAATTTGGCTATATATTTCGGTGCCATTAAAAATAATCGTTCTTTTGCCCGTGTTATTGCCACATAGAAGCATCTCAACTCTTCGTTATCTTCTACTGTTCCAATCTGATCTTTATCTGTAGATGGAAACATTGTATCTACGCAGTTCATAACAAAAACAGAGTGAAACTCTAAGCCTTTTGCGGAATGAATTGTAGATATAACCATTCGATCTTCCTCTTCCTCTTTCTGAGGACTGGCTTCAAGCATTATTTCTTCCAGAAATGTCACTGGAGAATCATATCCATCTGCCATTTCAATCAGTGTATCAAAATCGCGGACCGCTTGTTTATTTGCTCTAGCAAGCTCCCTACGTTTCTTCTCCGATGTTTTCATCAGCATTAATGTAATGT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CATTTGGAATCATTTGCTTTTACATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //