Array 1 414137-413271 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWP01000001.1 Aphanothece cf. minutissima CCALA 015 NODE_10_length_543875_cov_101.742_ID_31788, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 414136 36 97.2 38 .....G.............................. GAGCTTGACGGCTTCCCGGAGTGCCGCCTCTTGACGGA 414062 36 94.4 41 ......GT............................ GGCGTACATGCAACTGACGGCCAAGGGCGCGAAAGCGGCCG 413985 36 91.7 39 ........C.....T..................T.. GTCACTACTGAAGCAGTATCAGATGTGTTGAGAAGGTAA 413910 36 97.2 39 ..............T..................... CAATGCGGGTGACATCATCTACCTGCAACCCGAGAAGTA 413835 36 97.2 40 .................A.................. ATGAACCCACCGACTTCCGCGCCCTGTGCGCTGAGCTTGT 413759 36 100.0 42 .................................... CTTCCGGGACTGGGACCTCGAGGAGCTCACCGAGCTTGAGGC 413681 36 100.0 39 .................................... TAGCCAAGACGGCCACGCCTCATCGGTAGCCCTTCTCAC 413606 35 94.4 39 ........-.......................C... GGTGGGACTCCCGGTTCCTCCGGAGGTTCCCGATGGGGC 413532 36 100.0 38 .................................... AGAATAAAAGACATGCACGGCCTTTGCGGCTGGATTTA 413458 36 100.0 40 .................................... CCATGGCTAAACCTCATCGCTCCGATTATTTCCGAGGGTT 413382 36 97.2 40 A................................... CTCACACATCGTCTACCAGGCGATCAAGCTCCAATGGCTC 413306 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 12 36 97.4 40 GTTTCAACTTCCCCGGATGAGCGAGTCATCCGGAAC # Left flank : AACACAGGGATCGAGCCACCCCAGCAGTTCTTGTGGGGATGGTGGTGGTCATCGACGAGCTGCAGATGCCAGAGGCAGCGAGCTTGCCTTCGGGCATCGTGATGGCCTCGTCGTTGCTGCCGCGATCACTGGCGGGCTGGATGGCGCCCTGCTGGGTCACCACCACCTCGTCACCACGCAGCAGCTGGGCCGCCAGTTGCATGCGCCGCTCGGCGGCGGCCTCGCTGAATGGGACAGGCACCTGGAATCCTTTGGTGTTGTTCCAGCGTGCCTTCAGCGCTCCCTCGATAGCGGAATTTTCGTGTGTTCGACCAGGGAGTTGGCGATGGGCCTGCCGGGCCATGGATCTGTGCCTCCCATGGCGGGCCTGTGACCTCCCCTGCTGTCCCGGGCCTTGTGGGCGTGGGTGGTCATCGGCATGCGGCAGCGTCCAGATGGGCTGGATATGGGGACACAGGCCCTTGAAGGGCTGCTCTTTCTTTCTATTGGCTGATGGTTGG # Right flank : TCCGGCCTTGAGAAGCCGGGTCCCGCAAGCGGTTTGGAGGCCGTTTGCGCGCAGCCCCATCATGAACCCCCACCGGCCTAGTCGCAAGCCTGTGGAAAACCCTGAGATCCATTGCGCTGCAAGGCAGCGCGCAGCTCCACGCAATCACTGGGGTTTTCGGGGATTCCGGCGCTGCGCGCGGAGCCGCCAAAGCCGCTCTCCCCTGCAGCCGCAGCCGTTTTGTCCAACTGGAGGATCCGCGCGCATCCGGTTACAGGCCGCGCACCCCCCTCAGCCGCTCCCCCCCACCACCGGCCACCAGGCGTTCGCCGCCACCAGCTCCGCCTCGCTGCAGCCCGCCGCGCGCCGCACCTCCGTCGCCTGGCTGTCGCCCAGGGAGCCGTGCAGCTCCTCCCCCAGGGCTCGGCGCAGCAGGTCGCTGGCGGCGAAGGCGGCCGAGGCCTCCGCCAGGCTGGCGGGGAGGCGCTCTGCCGTGCCGGCGGGCAGGCCGGCCGGATCGC # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTTCCCCGGATGAGCGAGTCATCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 415584-415989 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWP01000001.1 Aphanothece cf. minutissima CCALA 015 NODE_10_length_543875_cov_101.742_ID_31788, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 415584 36 100.0 38 .................................... TAGATATTGCCCCACTTGGCGATCACCTCATCCCAGGT 415658 36 100.0 37 .................................... CACGGCAGGGGAATCCCATTCTCCGCAGCCACCACTT 415731 36 91.7 40 .......A.....C.C.................... TGGGAGACTCGATGGGGCCGGCAGTGACCAGTCCCTCTTG 415807 36 94.4 38 .......A......C..................... GTCGCCTTCTGACCCCAATGGGGCCCGAAGAGCACCAG 415881 36 88.9 37 .......A......C..............C.....A GACATCGGGGTCGAGGCTGGCGAAGATTTCACCACTG 415954 36 80.6 0 .......A.....C.C..............CACG.. | ========== ====== ====== ====== ==================================== ======================================== ================== 6 36 92.6 38 GTTCCGGGTGACTTGTTCATCCGGGGAAGTTGAAAC # Left flank : ATGCCGTTCAACGAAAGGGGGGAATGCATCCGCGCCTCGCGCGCCGCGCCACAACCTGTCTCCTCCGCCGGGGTGCGCCCGCCGATCCGCCGCCAGACCCTGATCCGGGTGGCCCAGGTCCTGGGCTGGCTGCTGCTGGTGGGCGGCGTGATCTGGTTCCTGGCGACCTTCCGTGTGTGGATCGTGATCGGCCTCTTCCTGCTTGGATCGGCCCAGGGGGGGTAGCGAGGCCCCGGAGCTGGCCGGGTGAGGGGGGGGTGCGCGAGGCTCCCGCAGGGCAGTCCGCCCGGTTTCATGGGCTTCTCCCGTTTCGATCCGCCGCGCACCCCCCTGCGATTCGCCGAAACCCCAGTGATTCCGTGATCCGGCGCGCTGCCATGCGGCGCAGGGGATCTCAGGGTTTTCCACAAGGTTGACGCCCCGCGCAGACGTGCGCATAGTGGAGGGATGCGCAAACGGCCTCGAAACCCCTTGCGCCGCCGGGTTTCTCAAAGGCCGGC # Right flank : CCCTGCCCCGATCAGGGTTTCAACCCCTCTCAGACATCACCAGCAAGGGAGTCGCCCCTGTTCTGTAATTCCTTGCCGCAGGAAATACACCCCCGCTGCGGAGTCGATCGGCAGCCAACACCCGACCTCCAGGCAGGGAATCAATCGCTGCTCAAGGCCACGAGCCGCCCGGCCCCGAAGTGGCGACCCCACCCCACCCCGAGCAGCGGCAGGGGCTGGTCCGCTTCCAGTTCAGCGTGAAAACCACGTGTGGAGGCCGCACGGCGATCGCCGCGGCTCGCCACCAGGTTCGTTTCCGCCGCGTTCCAGGTGCGGGCGCTGAGCCGGCCGAGCCGGGGGTGGTCGATGCGGCAGGCCCCGGCCTCGGGGCCGTCGAGCACGAACGCCTCAGGGCTGAGCTTGCCCTCTTCACCCAGCCCCCACAACAACGACTGGATCGCCTGGGCCGCCGCTGAACGCTGCGGCCGGCCGGCCCGTGGCGTGGTGTACAGCAGCATCGG # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGGTGACTTGTTCATCCGGGGAAGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.60,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 442406-442967 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWP01000001.1 Aphanothece cf. minutissima CCALA 015 NODE_10_length_543875_cov_101.742_ID_31788, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 442406 36 100.0 41 .................................... GCATGGGCCTCCTGCGGCGTCAGCAGCGGCGGCGCGGCTGC 442483 36 100.0 39 .................................... CCGAGCCCCCCGCCGCGCCGCCGCGCTGAGACGAGTTGA 442558 36 100.0 39 .................................... GCCCGTGGATTGCCTTTTGCCCGTACCGAAGGACTTGAA 442633 36 100.0 41 .................................... TTGGGTGAACCCATCAGAAGAGGGGCTTCCACGTGGGTTTC 442710 36 97.2 37 .....................A.............. ATAGCTACTATCGTTTTAGCTTTGCTTCAGAGCCCGA 442783 36 97.2 38 ..................A................. TGGGAGCAGGAAGACTCTTTTGGAAGAGAATGGCCATC 442857 36 86.1 39 ............C.....A.TG...........T.. TTGATCACGATGGGAGCCATTTCTCCTGGGGGATTTAAC 442932 36 72.2 0 ...T..T..G..C.........TA.G...G...GG. | ========== ====== ====== ====== ==================================== ========================================= ================== 8 36 94.1 39 GTCACCACTCGCTGGTGACACCATTTGATTGGAAAC # Left flank : GCTAGAGGGCTATGGCGTCCGCCTGCAGTGGAGCGTGTTCGAATGCCGGCTGGAGCCACACCAGCTTCGCCGGCTGCGGCAGGGTCTGGATCGCATCGCCGATCCAGCCGACAGCATCAGGCTCTGGGCGCTGCCTGCACGGGCCGCCGAGCCTGTGCAGCTGGGCAAGGACGTGGAGCTGCCCGTCTGGCAGGACAAGGTGATCTGAGCCCAGACCAGGAACCTATCGGCCTTGTGCTGGCGGGGTGCGGGAGGGTGCGCGGAAGACCCAACACGTAAGAACCGTTGCGAGGAGCGAGCTCTGGCCGTTTCGATCCGGCGCGCACCCCCCGGCCATTCGCCGAAACCCCAGTGTTTTCGTGATCCTGCGCGCTGCGTTGCGGCGCAGGGGTTCTCAGCGTTTTCCCCAGGGTTGACGCCCCGCGAACGGGTGCCCATAGTGGAGGGGTGCGCAAACGGTCTTCGGATCGCCTGCAGCGCAGGCCCTCTCGGGGGCCACG # Right flank : CCCCTCCCCCGCTGGTGTATTCAGCCAGTGGGGCTTTTCAGTGCCAGTATGATGAGTTCGAGCGGTGGAGCCATCATGGCACTCAAGTGTTGCCTGATCCCCTCCGCATGTGTTTGTCCAAGGCTTGAAGTTCTCATCAAAGGCGGCGAAGGCGTGACCCATCATTCCCTTGTCTATCCCTTACCCCTGCTGGTTCCCCCAAGGAGTGGCACCAGCGAATGGCCTCCACCTTTGCCTCAGGCCATCCGTGCAAAAGCCAGCAGCAGTTCAAGGTCGCCCCGATCGGCACAGCGCAGGGCATCGATGTAAGCAGCGCGCAACTCGGTTGTTTCCATGAACGAGGCTGTTCCTCCCCATGGGAAGGCAGAGCCACCCAGCTGTTCCGCCAGCACATCGGCCATCAGGCGCGCATGGCGCCCGTTGCCATGGAGGAACGGAAGGATCACCACCAGGCGATGATGGAAGGCGATGGCGATCTCATCAGCAGAGGCCACCCGATG # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACTCGCTGGTGACACCATTTGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 4 447659-448212 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWP01000001.1 Aphanothece cf. minutissima CCALA 015 NODE_10_length_543875_cov_101.742_ID_31788, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 447659 36 100.0 42 .................................... TTGACGGAAGGAGAGTCGCGTGAGGTTGGGCTGCTGGTTTGC 447737 36 100.0 33 .................................... ACTCGGACGTTCGAGGATTGCCGGATTCATCTT 447806 36 100.0 39 .................................... CTCGTTCGCGGAGACGTTGGCGAAGTACAGACCACCCGG 447881 36 100.0 39 .................................... ACCGAGACCACCAGCGAACGTGCCAGCCGCACCGAGGGC 447956 36 100.0 39 .................................... TGATGTGAATGGGAGAAGGCATTGAAAATGGGCGATTTG 448031 36 94.4 36 ...........T................C....... CCTGGATCATCGTCACTGAAAAAACGCTGTCGTTAG 448103 36 94.4 38 ..........TT........................ TTCATATGCCTCCGAGGCATAAGGTTCTGAGTGATGGT 448177 36 97.2 0 ...........T........................ | ========== ====== ====== ====== ==================================== ========================================== ================== 8 36 98.2 38 GTCACCACTCGCTGGTGACACCATTTGATTGGAAAC # Left flank : AGGAGCAGCTCTGGGTGATCGCCTACGACAGCCCCAGCAACAAACGCCGCCGCAAGCTGGCCAAACTGCTGGAGGGCTATGGCGTCCGCCTGCAGTGGAGCGTGTTCGAGTGCCGCCTGCAGCCCCACCAGCTGCGCCGGCTGCGGCAGGGTCTGGATCGCATCGCCGAACCGGCCGAGAGCATCAGGCTCTGGTCGCTGCCGGCATGGGCCGCCGAACAAACCTATCGGCATTGCGCTGGCGGGGTGAGGGAGGGTGCGCGGAAGACCCAACAGGTAAGAACCGCTGCGAGGAGCGAGCTCTGGCCGTTTCGATCCGACGCGCACCCCCCGGCCATTCGCCGAAACCCCAGTGTTTTCGTGATCCTGCGCGCAGCCATGCGGCGCAGGGGATCTCAGCGTTTTCCCCAAGGTTGACTCCCCGCGATGCGGTGCCCATAGTGGAGGAGTGCGCAAACGGTCTTCGGATCGCCTGCAGCGCAGGCCCTCTCCGGGGCCACA # Right flank : CCTCTAGAAGCAGTGCCCTGTACACCATTAACGCGAACAACCTGTACAAGCTGTTCTTTGCCCACTTACCAAGACATTCATGTCAGATATTCAAGGCCGGGGGATGGATGAATTAATCCAAATCCTGGGCACAACAAAGCTCTCTCTGGATGAATTGACCGATAAGCTTGTCAGTCACGAAAAGTCCATGACGAGAGCTGAGCTCGTTCGGTGCGCCCTGGAGCTAGACACCATCAGAGTCAATGCAAGAGTTGTGTACAAGGAACTGATTAATAGGTTTCCCGATGATTACAGATAAATACTCCACACGCCCATCTCCCCTTAACCCTTGATGTTCACCCTTTATGATGAACCTTGACGCAATCCAGCTCCAGCTACAGGACTTGTCCTGCAAGCTGAATGATGCAGCAAAGCAAGATCTGCACATCGCGTTGTGCTTGCAGCAGACTATTGACTCCACATCACAGACTCTGGACAACCTACTGGCTCACGCCTCAGTC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACTCGCTGGTGACACCATTTGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //