Array 1 2281592-2282947 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044228.1 Lacticaseibacillus rhamnosus strain hsryfm 1301 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2281592 36 100.0 30 .................................... TGCAAGGCCTTCATGATTTCGTACATATCC 2281658 36 100.0 30 .................................... GGCTGGGACCCCGGCGACGACTGTATGAGC 2281724 36 100.0 30 .................................... CAAGTCTATGAGCAGCAGCTCTTCATGTTT 2281790 36 100.0 30 .................................... AGCGTTGATTTATGCCTTACAACGAGCAAT 2281856 36 100.0 30 .................................... AGTGCAGCTGATCGTCAATTTCCTGCAAAA 2281922 36 100.0 30 .................................... TTACCGTGAGTGCCGTTTGGGACTACCAGC 2281988 36 100.0 30 .................................... TTGTAAACATAATAAAAACACCTTTCTATA 2282054 36 100.0 30 .................................... TATAGCCCTTGCAATCATAAACAAGTATAT 2282120 36 100.0 30 .................................... TGTTAATGCTAATGAAATTGCCACAAAAGT 2282186 36 100.0 30 .................................... CAAAGTCATATGTATAAAGACCCTAAAGGT 2282252 36 100.0 30 .................................... TAAATCAGCGTGGGCAAGTTGTTTACACGG 2282318 36 100.0 30 .................................... CACGAAGACTACACGCACGCTGATGACTCA 2282384 36 100.0 30 .................................... GATGAAGAAGAACTGACAAAGATGATCAAG 2282450 36 100.0 30 .................................... AAGCCGGTTAGACGTGACATGCAAGAGCTG 2282516 36 100.0 30 .................................... TGGCTTCCCATGTATTTGACACATTACCTT 2282582 36 100.0 30 .................................... CATGCCGCAATCATTTGGGTGTCGTCATTG 2282648 36 100.0 30 .................................... TTCCACGCCAGTGTCTGATGGTACTGTTGA 2282714 36 100.0 30 .................................... TAGCTTGTTTGATAATGAATAGGATCGCGT 2282780 36 100.0 30 .................................... AGCAAAATCAAAAAACAACTTGAACTTTTT 2282846 36 100.0 30 .................................... GCCGTAACGGTCTGGTCAAATTCACTCACA 2282912 36 91.7 0 ..........................A.....A.A. | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.6 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGGTTGAGCTGGCACAGCAACTGGCAATGAGCTTATTAAAAGAGCCGTTGTTAAGCGAACTTCCAGTTACAGTCGAACCCGGTGGAAAACTTGAACAAATTATAAAATACTGTAATGTTCATTTTGATGAGGAAGTAGTCACGGAGCCCTCCTCAAGAATTGAAGCAGCAATTCAGACTTTGGTAAAACTTGAAGAGAAACGGCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGAGGGTATGAGCAGGTTGTTAGATCAGGTTAAGGATACATCGTTGGAATTGCTTCTCATTGAATTTTCAGATGTCGATCGTAGAAAGTTCTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTTATGGACAGTCGAGAACTGATTGATTAAGGGACCGTGTGAAAACACCG # Right flank : CCTTAACATTGCTAAACTATCCATTATTTGGGTCTCCTATAGTTGTGGAAGAGGAAAGGAAGTAATTGAAATAGAACGACAAAAATTATACAAGCGAGCAATGGACATGTTGTTAGATGGCTATGCTCCGTTAGACGCAGAGACATTAAGAGTTATGAAGGTACGCGAAGTTTATAGTCCTATTAATCGCGTAGACATGACAGCAGAGCAGTTAGGTGTTTGCTTTCCATTAAGACTAGTCAATAGAAAGCAATTGCGTGAGCTTAGAGAATTAATTCCACGTGACTTAACCCCGACAGAGATTTTTCTAAGAACAGCACGGTTGAAGGGTCAGGCAAAGCCATTGCACAACTATGCGCCTGATTCCGATGTCTGGCTTGATGGCATTATCGGTTCTTTATATTTTGGCGGTTCGGATGATGGGCATGATGATTTCTATTGACCAGACGCTGAAACTTGGTCTGGTAGTCCATCCTCTGAGATCGATATACGCCACAACT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //