Array 1 355439-350011 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVU01000002.1 Acinetobacter baylyi strain XH443 XH443_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 355438 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 355378 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 355318 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 355258 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 355198 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 355138 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 355078 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 355018 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 354958 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 354898 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 354838 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 354778 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 354718 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 354658 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 354598 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 354538 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 354478 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 354418 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 354358 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 354297 28 100.0 32 ............................ AAAAAAAGTGTAGCCAACTTCATACAGTTACC 354237 28 100.0 32 ............................ CAGGTGGCAGCGTTCCATTTTCGGGGGCAAAT 354177 28 100.0 32 ............................ AAAACCACATTATAAGGCTCGGTAAATGTGTA 354117 28 100.0 32 ............................ ATGAAAATAAGCCCCAATATTGTCAGTGTTCC 354057 28 100.0 32 ............................ GTTTCCGCGTCATTCGGGTACAGTTGCGACAT 353997 28 100.0 32 ............................ TTGAAACCTATGAACTTTGTGTTATACGTGTC 353937 28 100.0 32 ............................ CTTATCAAAATCGGTGGGATCTTTGTCGTACT 353877 28 100.0 32 ............................ GAATTATGCTTTAAAAAATCCTTTCGCGGGTA 353817 28 100.0 32 ............................ AATCCGATTTCTGCTGTTGCTGGGGTTAGAGC 353757 28 100.0 32 ............................ ATGTACTATAAGTCACATGGTAAAGACACGAA 353697 28 100.0 32 ............................ GAAACGTTGAATCCAGAACCAGCAATCCCAGC 353637 28 100.0 32 ............................ AAACTGTGGAGCATTACATCTACCATACTGCC 353577 28 100.0 32 ............................ TAAAACAGTCAATGTTAATTGGGGTGAACAAT 353517 28 100.0 32 ............................ GCGGTAGCTGGCGCGGTGTTTGCGTTTTTTGG 353457 28 100.0 32 ............................ TATAACTAGCATGTCAGAAATAAAACTATCCG 353397 28 100.0 32 ............................ CGTTGGTACTGTTGCAGGTGGTGCATTGGGGA 353337 28 100.0 32 ............................ GACTCCGCTACTTAAGAAAGAGAGCATAGGTG 353277 28 100.0 32 ............................ TAGAAGTAACTTACGATAACATCTTTGGCGCC 353217 28 100.0 32 ............................ TCAAGCATGTGATCACTAATGATTCGGTTTTT 353157 28 100.0 32 ............................ TATACTCCTTATATGTAATTTACGCGTAAACC 353097 28 100.0 32 ............................ CACTACATTTATACCCGCCGTTTACGCTCTTA 353037 28 100.0 32 ............................ GTTTAATGTGGCGTTCAGGTCTTGTTCGCCAA 352977 28 100.0 32 ............................ ACTCAGTTGACCAATCTTACTGCTTCACTTAA 352917 28 100.0 32 ............................ AGAAGATTTGGTGGGCAAAAATATGGAATATA 352857 28 100.0 32 ............................ ATTCTTAGCTGCATCACGCAAGATTTGCTTTT 352797 28 100.0 32 ............................ CTCATCGAAACATACATTGAGAAAAATCATTT 352737 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 352677 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 352617 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 352558 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 352498 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 352438 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 352378 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 352318 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 352258 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 352198 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 352138 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 352078 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 352018 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 351958 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 351898 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 351838 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 351778 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 351718 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 351658 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 351598 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 351538 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 351478 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 351418 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 351358 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 351298 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 351238 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 351178 28 100.0 32 ............................ TGGATCTCTGCAGAAATCACATTGTCCAAATA 351118 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 351058 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 350998 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 350938 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 350878 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 350818 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 350758 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 350698 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 350638 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 350578 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 350518 28 100.0 32 ............................ CAAATGTAATCAGGATTAGTCGATTGCAGCGT 350458 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 350398 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 350338 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 350278 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 350218 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 350158 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 350098 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 350038 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 91 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : TATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 431455-430470 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVU01000002.1 Acinetobacter baylyi strain XH443 XH443_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 431454 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 431394 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 431334 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 431273 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 431213 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 431153 28 100.0 32 ............................ TTCCACCAATCAAGAGTGGATTGGTCAATAGT 431093 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 431033 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 430973 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 430913 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 430853 28 100.0 28 ............................ TACTCGAACTTGTCTGTCATATTGCCCT 430797 28 89.3 32 TAC......................... TGAATACTCAAATGACAATAAACAGGATAAAG 430737 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 430677 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 430617 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 430556 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 430496 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.3 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCTAAATCATTAGGTGTAAATGCGATCTGCCGCTGAAGATTACTGATTTCAATCGTATCTGAGTCAATGAGGGTAATTTTGCCGACCCCAGCACGTGCAAGCAACTCAGCCGACGTACAGCCAATTCCACCCGCTCCAACAATCAAGACATTGGCAAATTTTAATTTTTCCTGAGCATCAACATCCCATCCATCTAGTAAAATTTGACGGCTATATAAATGCATTTCTGCATCGTTAAGCTCTAAATCCAGATTGTCCTGATCGTTCACTCGCGATTATCCCAATTTATGAATACTAAATTTATAACTATAATTATAAAGAGAAGCTTGTGTCGTGAGATGTTTTATTTTGACAAAAGTAAGCTTTTACCCCAATATTTTATTTACTCTTTAACAGCCAAATAAAATCAAAGACTTAGTTAAAGTCAAAATAAAATGGGTATTTCCATTTTATTTGCTTTAATGGATTGTTTATATTAATTATTTTTGCACTTTCTTACT # Right flank : AAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCATC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 463528-463915 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVU01000002.1 Acinetobacter baylyi strain XH443 XH443_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 463528 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 463588 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 463648 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 463708 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 463768 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 463828 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 463888 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : ATTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //