Array 1 2122438-2124058 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021426.1 Lacticaseibacillus rhamnosus strain 4B15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2122438 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 2122504 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 2122570 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 2122636 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 2122702 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 2122768 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 2122834 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 2122900 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 2122966 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 2123032 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 2123098 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 2123164 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 2123230 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 2123296 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 2123362 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 2123428 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 2123494 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 2123560 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 2123626 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 2123692 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 2123758 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 2123824 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 2123890 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 2123956 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 2124022 35 83.3 0 .......................AA.C...-..T.A | AA [2124043] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : AAACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //