Array 1 9340-9767 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGSWQ010000005.1 Staphylococcus simulans strain 1H5 1H5_00005, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
      9340	    37	 100.0	    28	.....................................	TTCCTGTATCATGAAACACACAAAACTT 	
      9405	    37	 100.0	    29	.....................................	GAATTGGGCGTAAAAACATTTGATGCATC	
      9471	    37	 100.0	    28	.....................................	GCAATTTTTAAATACTTGTCGCCCACTT 	
      9536	    37	 100.0	    28	.....................................	GCAATTTTCAAATACTTGTCGCCCACTT 	
      9601	    37	 100.0	    28	.....................................	AATTGTTTTCCATTAATACGTTCTTTTG 	
      9666	    37	  97.3	    28	....................................G	ATAATACACGCAAGTTAGCACTAGAAAG 	
      9731	    37	  86.5	     0	.............................T.G.CCA.	|                            	
==========	======	======	======	=====================================	=============================	==================
         7	    37	  97.7	    28	GTTTTAGAATTGTGATCTTTTAGAATGAAGTAAAACT	                             	       

# Left flank :   AATATTGTTTTGAAAAAGTTGCTTGGCATGTTTAAACCAGACTTTCATAATGATTTAGATGATTTAAATGCGATAGAGCAACGCAAATTATTTATAGACACATTAACATCAACAGAAAAAGAAAATGTGCTGGTTTTGTTATTCCCTGAAGCTCATTTAGGGCTTTCGGATATGAAGGCATTTAATAAATATCTGCAAACTCTAAATATGTTTAGTATTATTGTTACGAGCCATCCTTATTTTATTATAGAGTCTGATACATTAGCGCTTATTAAAACGAATGGAGAATCGGTAAATACTAAACAAATAAGAGAAGAGTTATTGTTGTTTAAAGAAAAAGAAACAATAACTGATTTGGATAAGACAAGCAAAATGATAGCTTATCATGAATTTTGCCAACATCCATATCTTGATGATGAGTTCTTCATTCAATTTATGAACAAATATTAGTTTACTGTCATTATAAAGGTCTCTAAAACCTTGATTTCTCGTTGTTTAAG
# Right flank :  TGGAGATTAACTTAACTATTTATCATGTTTGTATGAGTGGAAAAATCTTTATATTTGTTTTGGAAATGTCTTTGACTTTTCATCTATCTGTGTTAAACTTAGTACAGTTTAATAAAGAAATCGTAAGTCTTTAATTGAGAGTACAGAGATGCTCCGAAGGCAGATAATTTACATGTTGAAACTAGAGAAAGTAACTAAGTAAACACTTTATTAAGAGGTAATTTTGTATGAACACGCAATTCACCAACCCTGATTGCCATACAAATTTAGTAAAGTAACCGACAAAACAGTTACTGATTTAAATAGTTGAGATAGTAAATCTCGCATGTTCTTCGTGTCCCGTGTCTCTCAATTGAGATACGGGATTTTTTTATGGAAAGGTGAGTGCGGGAATGACAGAACGTATTGTATTAGATGATGCAGGCATGCAGCGGACTTTAACACGTATCGCACATGAAATTCTAGAGTATAACAAAGGTACTGAAAATCTTGTGTTGCTT

# Questionable array : NO	 Score: 3.15
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAATTGTGATCTTTTAGAATGAAGTAAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.68%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//