Array 1 199737-200185 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWI01000025.1 Vibrio sp. V31_P5A7T61 scaffold2_size280522, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 199737 28 100.0 32 ............................ TTCCACTCTCACTGATACAAGCTCGGCTTGTT 199797 28 100.0 32 ............................ GCTCTATCTAGCACTTTATGACCATGAAACAC 199857 28 100.0 32 ............................ GATCAGTCGAAAATCAGCGTCAAGCCGCAGTT 199917 28 100.0 32 ............................ GTTCATTTTTCTAGCGAGCGACATTATTAACT 199977 28 100.0 33 ............................ TCACTACTCCTCCTTGAGGAAGTAACGTTACAT 200038 28 100.0 32 ............................ TTCTTGGCAGGGTAACCCAGTGCGTCAATTCG 200098 28 100.0 32 ............................ TATTAAGTTAGCAATCAAGCTGTTAATCGGGC 200158 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCAAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAGGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGCTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACGAAGCAGGTACATCGTAAATTCTTTGAGTTTGGTGAAATACAGCCACTGCCAGTATCCGGAAAGTTTGACTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTGCTCTTTAAAAATAACCTTTAAATACAAATAGTTACAGCATGTGATTTAAAATAGGGTAAAAATGGCTTTTTTACTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : AAACCATTACACGCTCACCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACCGATGCCAAGTGCTTAAGTGAGCGATCAATGGTCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTTGTGTGGTTTTGGGATATGATCTCCATAGATCCCCGTCATATTTTGCCTGCTACTGTTGTGAGGCAGGGAAATGAAGGTGTAGCGATCATCGAAAACTGATCCACTAAATACAATTAGTCAGCATAGACTCCCACCTTGACGGCAATGATGCTTGACGCTTTGAATATTCGATTATTCACCGTGATTACAAGAAAACGTGAGTTTCTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATGAATTGCATTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 32724-32516 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWI01000009.1 Vibrio sp. V31_P5A7T61 scaffold18_size70093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32723 28 100.0 32 ............................ TGATGCGCAGATTTATCCAATCAACGAGGTGG 32663 28 100.0 32 ............................ GATAAAAAGCATGTTTGACTTCGGTGTTTCAG 32603 28 100.0 32 ............................ AACTATAGTTGCTGCGTTAGCCATATATCCCT 32543 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CCTTCAACAAGTAGTTGACGGAGAGTCTGCAGTTTAGTCTCTTGGTTTTCGAGTAAACGCAAAGCTGAGCGAATAACTTCACTTGCAGAGCCATAACGCCCACTTTGAATTTGGCTTGTAATAAAGCCATCAAAGTGTTCACCAAGGGTAATACTTGTGTTCTTAGCCATAAATTTATCCCCAAAAGTACCAATAAGTACCTAATTATGGTATTAAGTGGCTTCAAAGGCAAGTCGCATACAAGCGCTTCAAGAGGGACAACCAACGCGCGGTATTTTTACTATGCGTTGGTTTTTTTGTGATCACGGTTGCATCGGTATTCCGTTGTTCGCTCTTTAAAAAACAGCGTGAATTGGTAATAAAATTACCCCTCTTTTTTTTGTTTGCATTTAAGCTGTTGATTTATATAAGTAATAAATTGGATAAAAAATAAAGGGTTATTTTGATAAATTTGATGTAATTACCATTATTAACAATAAGTTACTGTTATAGTTTCATAG # Right flank : TTGCAGTTGATTGGGCTTGGTTGGATCAATAAAAACAAACTTTTATTGTATTGAAAGCCGTCATTGACTGAACCCAAAAATCAGGCAAAATGTTTACAAGATGCACAACCTCGCCCACTCGGCGGGGTTTTTTTATGCCTGTCATTTGGGGGTGACAATGTCACTAGATAAAGCCACGATTGCTATCGCCACTGGCACTGGAACGACGGTCGGAGTCAGTGCCGCTAAATCTGCGCAAAGTGCGCAATCTTTGTTAAATTCCAGTATTTCACAGATATTAGCGGGTGATTACACACTCTACGGCTCTGATATCGCTACGATAGCCGGTATCGTTATGGGCGCTCTCGGTATTGTGGTTACGCTCTATCGTATCCGCGTCACTAAGCGACTCGCCAATGCGTTATAACAAGCTGACTACGGCGTTAATCGGAGCTGCTATCGGTATAACGGGCGGTTTTGAGGGTTACAACCGCATCGCATACCAAGATAGCGGGGGAGTG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //