Array 1 55038-56395 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCSG01000003.1 Alicyclobacillus mali NBRC 102425, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 55038 37 100.0 36 ..................................... TGCCTGCCACAGCGCCCGTCACGCTGCGCCAGGTTG 55111 37 100.0 34 ..................................... TGCTCCACGTATGTGGGATGGGCGCTCCGGCAAG 55182 37 100.0 35 ..................................... CCAACCATGAGCAAGTCGCCAGACGGCCCCGTGGC 55254 37 100.0 34 ..................................... CAAGAATACACTTGCCACTTTCTTTTGCAGCGGC 55325 37 100.0 38 ..................................... TATATAGATCGGAAGAGACACAGATCGAAGGCAGGCCT 55400 37 100.0 38 ..................................... TCGATATGGGACGGACAAAAAGGACAGTGGGTGGCCAA 55475 37 100.0 36 ..................................... CTATCCGCCATCCCGACGCTCCTCCTCGTGAATGAC 55548 37 100.0 39 ..................................... ATACTATGTATCCTCGGTCTATGCTCACTGTACGCTGTT 55624 37 100.0 39 ..................................... TTATATGGGATCTAAGATACGAATGGGTTTAGAGTGGGC 55700 37 100.0 36 ..................................... GTTATTACCAATATAGTCACATAGACGATCCTCATA 55773 37 100.0 36 ..................................... GGAATTGTATACGAAACTGTGATCAATTCTATTCAA 55846 37 100.0 37 ..................................... TCGAACAATGTCGCGAAAGACGGAAAGAAAAGACCCC 55920 37 100.0 35 ..................................... TTAAACGCTTGGAGTTCAGCGATCTCGACAATCCA 55992 37 100.0 37 ..................................... TAAACGCTCCTAGAACCCTTTACGCGCGAAATACGCC 56066 37 100.0 35 ..................................... GCTGTTGTGGTCCGTCGATGTCTGAAGCATATCAC 56138 37 100.0 37 ..................................... CCATAAATATCATAGTGATCGAAAACCTTAAACTTAA 56212 37 100.0 38 ..................................... GACGCCTGCCTCCGGCGTGTCGTACACGACGACGCGAT 56287 37 100.0 34 ..................................... ATTATGGGACAGACGGAAAAAACGCCATTGGGCA 56358 37 94.6 0 ...........................T.....T... | C [56390] ========== ====== ====== ====== ===================================== ======================================= ================== 19 37 99.7 36 CTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Left flank : CTCATGTTGGTAACTACATCCATTGACCAACTCGCTCATGGTAAGCCAGGTGGAATGCGTTCGTGTCGGCAGCATCAACCTAGCGCGCATTCCTCGGCTGTTACCCAGAATGTCGTGAAGGCTGAGAACTGAGAACTGTCGCGATGGACTGACTGGTAAGCGTCACGCGACTTAAGCAGATGCTATATGGCTCGCCATATGGCATCGGGGAGCAGGGTGCGAATCCTGCCCCATCTAGTAGAACCACCCGTCGTCTCGCGTCGCCGCATGCTGCACAGAGAACGCGGGCAGCCTATCTTCACGGAGCAAATTCGCGAACCTGAATCGGTGGCAAAAAGCCCGGGGTTTCGCGTTTTACTCGAAAAGCGCGCCAAATCTGGACTTTTTCGATGTGAGGAGGTATGATAGGTGCACAGGATTGTGGTTCAAGGGCGACCTCGTGTGGAGGTTCGCGTTTTTGACCCGGGAGCCCGCGTCAGGACCGGGCTCAAAGGAGTGCC # Right flank : CCTGCTCTCCTCTACATGTCTACCGCTGTCTCGCACCATGGAAAAAGCCGCTCCGCATCGGAACGGCCTTCCTGTGCAAACCCATCTCACCGATAGACGTCTCCCCCGCCGGTCCGGAACGCCTCGGCCTTCTCGCGCATGCCTTCGGCGATCGCCTCCTCGGGCTCGAGCCCCCGCTCTTGTGCGTACGCGCGTATGTCCTGCGTGATCCGCATGCTGCAGAACTTCGGCCCGCACATGGAGCAGAAGTGCGCGGTCTTCGCGGGCTCCGCCGGCAGCGTCTCGTCGTGAAAGCTCTCGGCCCGGACAGGATCGAGCGCCAGGTGGAATTGGTCACGCCAGCGAAACTCAAATCGCGCCTTGGAAAGCGCATCGTCCCACTGCTGCGCTCGTGGATGGCCCTTCGCCACGTCTGCTGCGTGCGCGGCAATCTTGTACGCGATCACGCCCTCCTTCACATCGTCCCGGTTGGGCAGCCCAAGGTGTTCCTTCGGTGTCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 22298-21173 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCSG01000017.1 Alicyclobacillus mali NBRC 102425, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 22297 37 89.2 36 T.G.G.T.............................. GTTCTCGGTGTTGACGGTACGAGACATCCTGCGATT 22224 37 100.0 36 ..................................... ATGGACAGCAATGGCTTCTGATACTACGGCGAGGTA 22151 37 100.0 36 ..................................... GGATGCAGATGGTGCCACCTGTCAACACGGCTTCGA 22078 37 100.0 35 ..................................... GGTATTTATAGGTGGAGAATAAGAAACCGGTGTCG 22006 37 100.0 35 ..................................... TCGTATTGCAGTTCCGTCCATGCGTTCGTTGTCAC 21934 37 100.0 35 ..................................... CAAACGCACCCAGACATATATGGGTTACGGCTCAC 21862 37 100.0 35 ..................................... TCTGCAGAGATGAGGACTGGAAGGAGGTCTGTAAA 21790 37 100.0 36 ..................................... GTGGGACATCGAGCAAAGCGGGCTGAGCAAGAGATT 21717 37 100.0 37 ..................................... TTCCTCCTGCGGGGAACGACGTATATTCCCACAAGAT 21643 37 100.0 36 ..................................... GGAGGCCACGGCCAAGTCCATCTACGACGCCGGGTA 21570 37 100.0 34 ..................................... AGGGCGCGGTTTACGACATGTGGGACGACGCGCT 21499 37 100.0 37 ..................................... ACAACATCCTGATCCCGAATGCCGTCTGGAAGACCGG 21425 37 100.0 34 ..................................... ATAACACAGCGGAGATCACGATCTTGCAACGCAA 21354 37 100.0 35 ..................................... ACTTTGCGGCGTGATCATGTGGCGGCGATTATGGA 21282 37 100.0 36 ..................................... GTTTGCTGGAGCCACAACAGCAGACGGACTCTATCC 21209 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 16 37 99.3 36 GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Left flank : GCAGCCTTTGGTCCACCTATGCCATCAGCTCCATTGCTGGAGCGGCGTTCAGTGGCTGGATCTCCAAGAGACGCAGGACCGGCGTCGTCATGGCGATGATGATCATCGGATGGGGCGCGACGTTCGCGCCGGTGTTCTGGATCCACGCCTTCACGCTCATCTACGTGTTCCTCGCCTGCGCCGGACTCCTGTTTGGCGGGTATCCACCATTGGCGCGGACCGTCGTCCAGCGCTCTGTGCCGACACAGGTCATGGGACGCATCATGGGCCTACGGGGCTCACTGATTGCACTTGGCCCGCCGCTCGGCTCGTGGCTCGGTGGCATGTTGGACAGATGGTGCAGTCCTTCGGACGCCATCGCCCTGATCGGCATGGCCGTTGTGGCACTCGGATGCTGGCTTGGCTCACGGGATGACTTTCGGAGGATAGAAGCTTAAAAGCGGAATGCATCGCCACGATTAAAGATGTTCGAAGAGGGCGGGTGATTACCGCCCTCTTTG # Right flank : TCTACGCCCCTGAGCCCGCTCCTGGCGCGGCCTTCCGGGCGAAAATCGCGAACCTACGCAACGCGCGTCCTTCACGCGCCTTCCAACTGCCATCATCATACCCTGTCTATGCTCAAAAATCCAGCCCCCATGCGGAATTCTCGCATTTCGCGAACCCCCCGGGTTTTCGCCATCGATTCAGGTTCGCGCTCCTCACCCCGCCGCTTCTCAGTGTGGTGATCCATGGCACCACACGCCCCGCTTCGCCCCAGACCTCGTCTGCGAACGGGGCCGTCCGAATTCCCCTGCTCCTTATGTTCTCACCTGCTACCCTGCAACCACGCAACAAAAAACGGGGCCACACCGGGCCCCAAAGTGAGTGCCATGCCGAGTTGGAACCATCCTCGCAGAGCGCCGAGATCGCGGGGCTCATCAGCCCGTCGGGCTGAGCCGTCACGCCTCCACAAACTGTTCCTCCTCCGTGGAGCCGGTGAGCGCTGTCGTGGACGAAAGTCCGCCAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 51307-52813 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCSG01000017.1 Alicyclobacillus mali NBRC 102425, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 51307 37 86.5 36 ...A...G............CG...T........... GGAAGACCTCGAGCACCCACTCTTCGCCCGCAAGCC C,C [51316,51320] 51382 37 100.0 35 ..................................... TTAGGCAATCAAGTGCAGGAATGTCTTCGCGCCCG 51454 37 100.0 36 ..................................... GTTGATCACCCCGCGTATGTTGTGCAGGTTACGATT 51527 37 100.0 35 ..................................... CCGGGTAGCATTTCGTCCGCAGTCGTGGAGCTGTG 51599 37 100.0 38 ..................................... GCACGGGTTCGGGCTCTTTATGGAGCCTGGAACAGGTA 51674 37 100.0 39 ..................................... GTTATACGAGCTTGGCATGATTGGCCTTGTCAAAGCTGC 51750 37 100.0 37 ..................................... AATTATGATAAATACTGTTACTATCTGAGCCAAAGTA 51824 37 100.0 36 ..................................... TGACTTCGATCTTTACGGATCTCTGTTTACTGCACA 51897 37 100.0 39 ..................................... GGTGCTGCCTTTGTTCGCGAGCGCCAACAGCGCCTCGTA 51973 37 100.0 36 ..................................... GGCCTCGAAGTCTGCTTCCTTGCGCTTGATATTTTC 52046 37 100.0 39 ..................................... TTGTACGCACCCATGGTCAATAATAGCTACCAAATTCAG 52122 37 100.0 37 ..................................... CAAAGCCCTGCAAAAGTTTGTGGAGCTCGCCGCGCCG 52196 37 100.0 36 ..................................... CCGCCCCTTTTTTGCTGGGTATTTCTGCGGCGGAAG 52269 37 100.0 35 ..................................... CGCACACGGTCGTACTTCGCGAAGAAGTTCTCGAG 52341 37 100.0 36 ..................................... GCGTCCGACAGCGACGGCGAAGTGTTCTCTGGCGGT 52414 37 100.0 35 ..................................... TGTGACTGCGGATCTTGCGATCCGGAGATCTTCAT 52486 37 100.0 36 ..................................... TGATCCTGGATGTAGTAAACAGCCCAAATCCAGGAA 52559 37 100.0 36 ..................................... GGAGATGCAGGTAGCGACGAAGTGCTCGCATGTGCT 52632 37 100.0 36 ..................................... GACTTCAGAGGTTGCGCGAACGTGACGGAGAGGTGG 52705 37 100.0 35 ..................................... AACAAAGCGAAGAGTCCCTAAACCATTAACTCCAC 52777 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 99.4 36 GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Left flank : TCCATGTAATGTTCGCGCATGGCCGCAAGTCTCATCATCTTGTCATCAATGTGGCGAACCACGTCCTCAAGCAAGCGCACGGATTCCGAAAGCATTTGGACGTTGTGTTCGGGCTCCCGACCTTCTGCGATGCGCGCCCGATAAGTCTTCAACTGGTCTTCTGTGGAGAGAATGGACCGAATCTCTTGCAGCGAGTAGCCCAGGGCTTCCTTGAGGCGAAGAATGTGTTCGATGCGTTCAATCGTGTCTTCGTCATACACCCGATGTCCACCCGGCGTTCGCGGAACCTCAGGAATGAGACCCTTCTCTTCGTAATAGTGGAGCGTGCGCGGGGTGACGCCCAGTCGTTCCGCCACGGCTTCCACGGTCCACAGTTTGCCGCGCTCCATCTTCCACCTCCTCAGCTTCTGCCGCACCCCAGTGTACGCCAATCAGAAACTCACGTCAACGTGAGGTTTAGGGCACGCATACTCGCATCATCTGAATCGGGTAGAAGGGAC # Right flank : CTCCACGCTTCACAGCCCGCTCTTGGCGCGGCTTTCCGGGCGAAAATCGCGAACCTACACGGCTCGCATCCTTTTCAGATGTTCCAACTGCCCTCATCATACCCTCTCACCGGTCAAAAATCCAGTCCCCATGCGGAATTTTCTTATTTCGCGAACCCCCTGGGTTTTCGCCATCGATTCAGGTTCGCGCTTCTTGAATCGTTGCAGGCAGACGCATGTACCATGCATCCCTACGCAGATGCATTCGTTCGATGAAGGTGCCCTTTTTAACTGCCCCTGTACCGAAGAACTCGAGTTATCGTGTGCCACACGTGCACCAAAAACACGTTCTCAAGCTCCCCATCGCGCGCTATAATATCTCTTCTACTCCCAATCTCAACATGGTGAGATCTAAGGGGGTGGCCAATGAGTGGTTGCTCTCGCTGCATACGTTCTCGTAGCGGTCTTTGCGGCGTTGTCTGGGTTGAACGATGGAGGCAATTTGCTCGCGGTGCTCGCGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 46479-44232 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCSG01000027.1 Alicyclobacillus mali NBRC 102425, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 46478 37 91.9 38 ...GA.C.............................. AAGTACCATCGGAGAAGCAATCGTCTGGTGCCTACGAG 46403 37 100.0 37 ..................................... CCTCGTAGTATCTACTTACTACGAGGATACTATTAAA 46329 37 100.0 37 ..................................... GCAGTCCGTATTGCGACAGGCTCCAGATTGGGCCGTG 46255 37 100.0 35 ..................................... GGGAGGTATAGGATATGTACGACGTAAACGACTTT 46183 37 100.0 36 ..................................... CTTTCAAGGAACGGCGCTGCCTGGGCCCTTACAGCC 46110 37 100.0 36 ..................................... GACATTATCTATGCTGGTCCTGGATCGATCTGGATC 46037 37 100.0 36 ..................................... TTCGCTACCATCTGAGCGCGTTGAATATCGGTCTCT 45964 37 100.0 38 ..................................... TTCTGGCTCGCTGTCAAAGCGCTGACAGGGTATTCCAA 45889 37 100.0 35 ..................................... CGTACCTATCCCCATGTACACTTGTCACGCGAGTC 45817 37 100.0 34 ..................................... CCGAAATCGCACAAGGAGAGGAGGGCGGCGCAAT 45746 37 100.0 37 ..................................... GCGGATCGAGGTTCGGCTGGAGCACCTGGCGCGTCCA 45672 37 100.0 38 ..................................... GGGCTTGCGCAGCTCCGGGCGTTTCATGGCAAGCGCGC 45597 37 100.0 36 ..................................... AGCGCAGGTGCGCCAGCAAAATCTCCAGTTCATGCG 45524 37 100.0 37 ..................................... GTCTTCGCGCTCGGGGATGGCGCTTGACGAGGCAGTG 45450 37 100.0 36 ..................................... GGAACTGGATGCGGTTATTTTACGCTCGCCAAATGA 45377 37 100.0 37 ..................................... TTCGCCAACGCCGCCTGTAAACGCGCCGCGTCGTGCT 45303 37 100.0 38 ..................................... TTTTTGGCGTCTTTCTTCCATCCCATCTTTTAGTATTT 45228 37 100.0 36 ..................................... TTTTATTCATATGGATGAATACATATCGGAATAGTT 45155 37 100.0 40 ..................................... ATTCGAGGCATGTCAATGAGATCGCAAAGTATCTTATTGA 45078 37 100.0 36 ..................................... AAGGTCTTTATCTCTCCGTCGGGCGTCGTGACCGTC 45005 37 100.0 36 ..................................... AGAACGGACAGCATAAACGAATAAGTCAATATCCTA 44932 37 100.0 40 ..................................... CTTTCGGCCAGAAGAACGCCAGGGCCTTGGCGCGCCGCGG 44855 37 100.0 35 ..................................... ATGAATTCCTTAATCGATATGTAGATGATGTAGTA 44783 37 100.0 38 ..................................... GCCGCTCTTGGTGTAGAAGGCGAGATTATTCGCTTGTG 44708 37 100.0 37 ..................................... TAATATGGGTAACTTAAATCGTCAACCGCTTGGGAGC 44634 37 100.0 36 ..................................... GGGCACTGCTCAGCTGCGTCGTGAGTCGCCCGCTAC 44561 37 100.0 36 ..................................... GCCGTTCGCCTTCGCATCCGCCACGATGGTCTGGTT 44488 37 100.0 37 ..................................... GGGTTGGAGGGGGTGCCAGCTGACGGTGGTAACTGAA 44414 37 100.0 36 ..................................... TCAGCAGCACGGATCATATCCGATACAACAAGGAAA 44341 37 100.0 36 ..................................... TCCGGGCGTGTTGGCGAACACCCGCACGGCGCGGTA 44268 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 31 37 99.7 37 GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Left flank : CGCCAAGTATAAGCTTGGGACGCAGCTCGGGGCCAATCGGCTAGCAGCCGTCGGCATCTCCGTACTCACCGCAGCACCGGCATACGGTGGAAACCGGCTCGCAATCATTGGCGGGCATTATGATAGCCAAGGATTCTCTCTTGCATGGCCTATATGGAGAGAACCAGCAACTTTGTGTTCCATTCGATGGATGCTCGCGCATCCCGACTTACGGACCGGGGGCCTGCGCCCGCTCGGGGTGGAGCAGGTGATGGTGTCGCGGCGCATTCAGTTGGACAAATACTTCAGCTTCACGAGGGCCCAACCGGTGAGTGCTATGGGCAGTTGAGCGGACGGACCCGCTAGGCTTCAAGTCGAGACGAACCCAAAGGCCACCTTCAGACACCGCCATCAGGCGCATCTGCAGGTGGCCTTTGTGTGCCCAACAACACCTTCAGGACCAGCCAAAAGTCTTCGGCGATCAAGGAAATGGGTGACGGGCGCTGGGAGTCGTCCCGACT # Right flank : GCCATCCCCCCGGAGCCCGCTCCTGGTGCGGTTTCCCGGGCAAAAAACGCGAACCTGCGCGGCGCGTGGCGTTTACACGGCATCCAACCACCTTCATCATACCCTCTCAACGTCAAAAAATCCAGTCCTGACGCGGAATTTTCGTCTTGCGCGAACCTCCCGGGCTTTCGCCATCGATCCAGGTTCGCGCACCGCTTCGTTGCGTACCGTGTGAACACTCTAATCACTCAATCCTTGTTTGTGCGGAATCGATGCAGGATTCGTTGAATTCAGGTCGAAATGCTACTTCCATCGCTTGAGCACCGCGGATGTGCGTGCCGTCTCCCGAGGGGCCCTCACCGCATCGTGGCCGAGCAGTGGAGCTGCCCGAGTGCACCATGCTACCTCGGATGCACAGACGAACCGCTCTCATGCGTCGCTCGTTGCACCCGAATTTCGTCCATGCAGATTTCCTCGCAGCGCGTTCCGCGGTTCACGCGCCGGTACTCAACATCGCTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //