Array 1 178132-180672 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNWV01000014.1 Sunxiuqinia elliptica strain 114D_o Ga0227282_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 178132 36 100.0 30 .................................... CCCTAATTTGAACCTGAGGGTAACATCCCC 178198 36 100.0 30 .................................... TGGTAAAGGTCGTATAATCGAGACATATAA 178264 36 100.0 30 .................................... TCAACTGGCTACACGGTTAAAGGGTTGACT 178330 36 100.0 30 .................................... AGCGTAGCCAAAGATATGCGAGATGACTTG 178396 36 100.0 30 .................................... ATAATAGCAAAAATCATTGACCAGCTCACG 178462 36 100.0 30 .................................... TGCCTTCAAATTATTAAAACACTGAACATA 178528 36 100.0 31 .................................... CCCAAAGCGGTTTGTTATAAACCGGCCCGTA 178595 36 100.0 30 .................................... CTCCCTCGACAGGGGGAATGCCAACGCCAG 178661 36 100.0 30 .................................... TGAAATTGTACACATCAATTATGACTTTTG 178727 36 97.2 29 .....A.............................. CAACAGTTGAAGAGCCAAAACAAGAGATG 178792 36 100.0 30 .................................... AAGCTTGAGCATTTAGTTCAATCGGCTTAG 178858 36 100.0 30 .................................... ATCCAGGAGATCAAACATATCTTCTGGCAT 178924 36 100.0 30 .................................... AGAGGCGTTCTGCTTCTCCATCAGGTTGTA 178990 36 100.0 30 .................................... CAGTATGTCATTCAATAAAACACAGGTTGA 179056 36 100.0 30 .................................... CTTGCTGACCGGATCCCAGGCATGTGCATT 179122 36 100.0 30 .................................... GTAGGCAAATTGGTTGACGAAGAAATTGAC 179188 36 100.0 30 .................................... GACGAGGCAAGAAAGGACAACTAGATCCGC 179254 36 100.0 29 .................................... ACCCGATTAATCGTAAAAACCTCTCCACG 179319 36 100.0 30 .................................... TTTAAGGCAGTTGGCCACATAACCAACGAC 179385 36 100.0 30 .................................... CGGCATCCAATGGCGAAGCTTACGAGCTAA 179451 36 100.0 30 .................................... GTATTCCAGCACATTCCACGAGAGGTAACT 179517 36 100.0 30 .................................... ATGAACTCATTACGTTGAACTAACTACTTT 179583 36 100.0 30 .................................... CGTTAACAAAGTGTTTATGCCATGCCAGTA 179649 36 100.0 30 .................................... TTTCTCACGCCTGATGAAGCATAGCGATCT 179715 36 100.0 30 .................................... CAGTATTAGGCGTATTGGTCACCTTGTTTT 179781 36 100.0 30 .................................... TTGCCCTTGCAGACACAGGGCGTTTCCGCC 179847 36 91.7 30 .....................G....CG........ CGCGACCAGGTTGAATTGGATTTCTTCGCA 179913 36 91.7 28 .....................G....CG........ AGAGAGGTGGAATCAAACCACCGACCGG 179977 36 91.7 30 .....................G....CG........ TTATTCAACTTCGCCAAATTGGAGCTCACA 180043 36 91.7 30 .....................G....CG........ AGCAGGAGAAAGCACAGAAAGCACAAGCAG 180109 36 91.7 30 .....................G....CG........ TGGATGTTGAGAAATGTGAGGCCAACAATT 180175 36 91.7 30 .....................G....CG........ TTATTCAACTTCGCCAAATTGGAGCTCACA 180241 36 91.7 30 .....................G....CG........ AGCAGGAGAAAGCACAGAAAGCACAAGCAG 180307 36 91.7 30 .....................G....CG........ TAGTGCTCCTGACTTTGTCGATGGGAACCT 180373 36 91.7 30 .....................G....CG........ CAATGCATGAATTACAATGATAATTGGATT 180439 36 91.7 30 .....................G....CG........ GTATTAAAAAACTGACATTCAGCACGTAGA 180505 36 88.9 30 ......A..............G....CG........ GTAGAGCGTAAACAAACGTGACGCACGGGA 180571 36 86.1 30 .....................G...TCG.A...... AGCAGGGCTTTTTGTGTATTGGTGCAATAG 180637 36 97.2 0 .....................G.............. | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 97.1 30 GTTGTGGTTTGATGTAAAACAACTAAGACTTACAAC # Left flank : TCGACCTGCCCGTGACCTCTAAAAAGGAACGCCGGCAAGCCACCCGATTTCGGAAAGACCTGATGAAAGACGGCTTTTCGATGATGCAATTCTCGGTCTACATCCGCCATTGTGCCAGTCGCGAAAGTGCCGAGGTACACCTCAAGCGCGTGAAGGATTTTGTGCCCGAAAAAGGACAGGTCAGCATCCTGGCTGTTACCGACAAACAATACGGGAGCATCGCCAACTATTGGGGCAAGAAAGATGATCCTTTGCCTGAAGGCCCCAAACAACTGGAAATGTTTTAAGCGCCCTTTTCGAAAGGCTGAAGCTTTGGGAAAACAATAAAAGAGCGTAACTTCCCCAATCCGTTCATTGACATATTGGCTTTTTCGTGTTAGTTTTGAACCGATAGGATTAAAAAAACCGTGCATCCAACCACTTCTTTGGTGTAAACCAGGCATTTTTCTTCTTGAAAAATCGCCGTAAACCCCCATCAACAAAGGGGATAAAAGCCCAAG # Right flank : CAGGGATATTTTGCAGTCAATACTTTCGGATAAATCTGAGGTCAACACCTCGCGGGCGATGGGGACAGCAGAGGCTGGACAACAGCGAAAGTATTTGATCAACCCGCAAAAGACCGGTCAAGCATTAGTACGATCGATTAATGGCTCACCGGTCCTTGATGGTGTTGCGCCCCGTTGCATTCAAACTGCAGGGTAATGTGTTCAATGCCGAATTCATCTTTCAGGATATGTGTCAACGCCTGATTGATGGCTTCGGTTTCCGACAGTTTCAGGTCGTGCTGAATAACCACATGCCCTTCAAAGTGAATGGTTTTATCGGTTAGCCGCCAAATATGGATATGATACACCCGCTCCACAGCCTCCTGCCGGGTCAGCCGGGCAGCAATCTCCGCAGGCACAAGATGGTCGGGAGCAAACTGCATCAAAATTTCGGTTGATTCTTTCAGCAGCTTATAGGTATGAAACAGCAGGTACAGGCTAATCAACAAGGTTACCGTTGG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAAAACAACTAAGACTTACAAC # Alternate repeat : GTTGTGGTTTGATGTAAAACAGCTAACGCTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //