Array 1 56453-55629 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NCLL01000003.1 Klebsiella quasipneumoniae strain COL-Kpn6 contig_3_0, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
     56452	    28	 100.0	    34	............................	TTATGGCAAAAAAACCTTCGCCAGACCAGGTAAA	
     56390	    28	 100.0	    33	............................	TATAATCCGGCTCCTGACCTTGCTGATGCCATG 	
     56329	    28	 100.0	    33	............................	CAATCCTTCGGGCATGGTTTCCAGACCAGAATA 	
     56268	    28	 100.0	    33	............................	TACGTAGAGATAAACCCGGCCCTCTTTTTCGTG 	
     56207	    28	  96.4	    34	...............A............	TTAAGGAGGGGCGCCATGGAGCCCGTATTGATTG	
     56145	    28	 100.0	    33	............................	CTCCAGTTTTGATGCCCGCCTGATGGTGCAGAC 	
     56084	    28	 100.0	    33	............................	CCATTTGAATTCAGAGGTGTGACGTGGCCGTAA 	
     56023	    28	 100.0	    33	............................	TTTCGATTTACCCGATGCTCTGGCCTTATCCAT 	
     55962	    28	 100.0	    33	............................	CCGCATCGGAAATTGTCTCCGATATACCGGCAT 	
     55901	    28	 100.0	    33	............................	TATCCTCGCGCTGGTAGAGGCGCTGGAGAAGGC 	
     55840	    28	  96.4	    33	..........T.................	CCGAGCTGGTGCATGCGGGCGATTCTGGCGGCC 	
     55779	    28	 100.0	    33	............................	CAGGTGGATGCAGTTGGAGGAATTGCTGGCTTC 	
     55718	    28	 100.0	    33	............................	GGTCAAAACCGCGGCCCCGGCAACTCAACGGGA 	
     55657	    28	  82.1	     0	T......A....TC..........C...	|                                 	C [55635]
==========	======	======	======	============================	==================================	==================
        14	    28	  98.2	    33	GTCTTCCCCACGCACGTGGGGGTGTTTC	                                  	       

# Left flank :   TTTACAAAGAGCGGCTCTGTATCGATCTGGCGTTTTCCCTGTCGAGGGAGATGGCGGGTCGATATGATAAACATAAAGTTTCTGATGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCCGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTTCGTGGGCGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTGTTCGTCTCTGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTATCTGATGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTTCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGGGAGGTCAGAAAGCCGATTATTGAGCTCAGTGGGTTACAACTGATTATTGAAACCCTAAAACTGTCGTAATTCGCGGATATAGTGGTTGAGTTGATGCTCTTTGACAATATGTTGGT
# Right flank :  CGCTCAGCTTATCCCGCCAGATGGCACACGGCTTCAATATTGTGCCCGTCTGGCGCAATCACAAAGGCGGCGTAGTACCCGGCGTGGTAGTTGGGCCGTAACCCCGGCGCGCCGTTGTCCTTTCCTCCGGCGGCCAGCGCCGCCTGCCAGAAGGCATCCACCTGCTCGCGGCTGTCGGCGCGAAAGGCGATATGCAGCGGCGCCGGTTTGTCCGCACTTTGATAGAGACACAAAGAGACATCGCCGCTGCCGGCCAGCTCTGCGCCGTAGGTCGGCTCGCCTTCATCGACCAGCGTTACGCCAAGCGGGGCCAGAGCCTGTAAAAAGAACGCTTTGCTGGCGGCATAGTCGCTGACGCCGAATTTCACATGATCGAACATCTCTTCTCCTGTGGACGGGGTATCGCCAGCCGAACGCGTTAGCCGGGAAATAGATGCAAAATAGTTAACAACGGGTAGTAACTTTTTTAACAGCTCAAAATGTTTAATTATTCCTAATAC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACGCACGTGGGGGTGTTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [41.7-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//