Array 1 14769-13947 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZF01000020.1 Ligilactobacillus salivarius strain KLW002 NODE_20_length_34972_cov_4.32781_ID_4919, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14768 29 100.0 32 ............................. TATGGCAGAAAGCCCGGAAATTAGATTATAAG 14707 29 100.0 33 ............................. GTAACTTCAAATTCAGCTACTTTGAGTTGGACG 14645 29 100.0 32 ............................. TACAAGTAGCGAATGTGCAACAACAAAAGGTT 14584 29 100.0 32 ............................. CAGATACCCACTTAGCTAAATCAGGATCATTA 14523 29 100.0 32 ............................. CATAGCAGCCAAGCTATAACATTACGTTATAT 14462 29 100.0 32 ............................. TGATAATATTCATTTTTCCTTGATCTGCAAAA 14401 29 100.0 32 ............................. TATAGACTTAGTGAAGAAGTTTAATAATTTAA 14340 29 96.6 32 ............................C TAGCTTTCACACTTGCTCCATACTGTCGCGTG 14279 29 100.0 32 ............................. ATTACAGTCGACTGGGAACAAAGCGACTACAA 14218 29 100.0 32 ............................. GAAACAAGGCAATTTCTATGTTAAAGATGGAG 14157 29 100.0 32 ............................. ATAAGGCTAAAGTGCTTAAGGATAGTGGTTCA 14096 29 100.0 32 ............................. ACATATGCTAATTCTTCCTTAGCATCATCTGG 14035 29 100.0 32 ............................. TTTGAAGATGGCACAGCTTATTTAGCAGTTGC 13974 28 86.2 0 ........T.......C....-.....A. | ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.8 32 GTGTTCCCCATGTATGTGGGGGTGATCCT # Left flank : TTAGAGAAAGATAGTATTATATCAATAGGTGCCGTTAAAGTAGAAAATAATAGCAAGCATGACTATTATTCTCTTATTAAAGGTATAGAAGAAATTCCAGATGAAATCAGTGAGTTAACTGGTATAGGAATTGATGAATTGAATAAAGATGGTGAAGATATATATAAAGTTTTAAAAGTATTGTATGGGGTTTTAGATGATGCTATTATTATTGGGTATAATCTTAATTTTGATCTTAATTTTCTTAATAGAGAATATGAGCAATATACTGAACTTAAGTTAGTAAATAAGGTGATTGATTTACTCCCAATAGTAAAAAAACAGTGTCGTTTTTTAGATAATTATCGCTTAGAAACGGTATTGCAATATTTTGGTATAGAAAATTCTCATCCACATAATGCATTGGAAGATGCTAAGGCTTGTATTGAATTGTATGAGAAACTAATAAAAAACAAATAGTAGTAACTTCAAAAAGATCGATTTAATAGGGATATTTTACT # Right flank : TTAGAAAAATTAAAGAAGTAAGGTCTTAAGTTATATTTCTAAAGTACTTTATAATATAGATTATAATATCCTCTGAGTATACAGATGAAATAGAAAATGACTCTGATGCTCAGGGGGTATTTCTATGGAAAAAAATCTAAATATTCAGTTGAAGGAAAACTATCAATACTTAATGAAACTTCACATATCGGAATTTTTGAAGTAACAATTAAGTATGGAATCGATTATAAAACTATTGGACGATGGAGACTGCTTTATCAGTATCAAGATCTTTAACCAAGTAATAGAAATCAGAATTATTCTAAGGAATTCAAGTATTTATTAGTTGAGCAATACAAACATTTAAACGAACCCGCGAAACTATTTGCGATAAAAAAGGTCTACGTTCAGTAATTCAGTTTAGGCAATGGATTATCTGATCCGGTATAATGAATCTAACTTAAGGACCAAGGACCCAGAAAGAGAGATTCAAAAAAAGAGTGGACGAAAGACTAGTTTTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.40,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //