Array 1 1328782-1330412 **** Predicted by CRISPRDetect 2.4 *** >NC_012883.1 Thermococcus sibiricus MM 739, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1328782 30 100.0 36 .............................. TTACGTAGTTTTTGAGCCGTAGCAACTCTGTCCTTT 1328848 30 100.0 35 .............................. GTTTGTTTGCTTTCATCTTCGTAAAAACTTATGTA 1328913 30 100.0 37 .............................. ATTATAACGAAAAAGTATACAGACGTCTTTGTCGAGC 1328980 30 100.0 37 .............................. TTTCGCAAACTTCTTCTTATACAGTACCTGCCACCGC 1329047 30 100.0 36 .............................. ACAAATGAAACAACTTTCACTTGAAAAGATATTACT 1329113 30 100.0 36 .............................. TGGTAGTAATACAAGTACTTTTTATACGTTAATGCT 1329179 30 100.0 43 .............................. TTAATGAACCTGATAAGTATTCGTCTAATACGTGTGTAAATAG 1329252 30 100.0 36 .............................. ATGTACATCCAACTCCCCTGACACATCCTCATACCT 1329318 30 100.0 36 .............................. ATGCTTTCTCTTTGTGTCGGTGGTAGTGAAGTAATC 1329384 30 100.0 36 .............................. TTATAAAGGGAAATGCGTTAAACATTAATGCCCCTC 1329450 30 100.0 36 .............................. CATGTTACTATCACTCAACGTAAACCAGAGTAATAC 1329516 30 100.0 37 .............................. CCGTGTATGCTAAAATCTCTTTCATAACTTTTTTGAA 1329583 30 100.0 37 .............................. AGAGGTCATTATAGAATCCCCAAGGAGGGAGTGGAGA 1329650 30 100.0 38 .............................. GAAAGTCGTAGAGTGGAGGAATGGAAATGGCGCGGATG 1329718 30 100.0 37 .............................. CTGTTCTTGAGGTATGCTTCAAACTCTTCAAGTGTTA 1329785 30 100.0 36 .............................. TCAAATCAGAGCACTAGGGTGACAAGAAAAAATAGT 1329851 30 100.0 37 .............................. CAAAAACCTCTTTTTGGTTTTCTCCTCCTTATCATCA 1329918 30 100.0 37 .............................. TCTTAATTGCTCTTTGTTCTGCTTCTACCATCTTTTC 1329985 30 100.0 36 .............................. TGGGGTCTCCCAATACCACCATGCCAGCGGTGTGTA 1330051 30 100.0 36 .............................. ACAAGTCCTACAACTGGTATGTTGTTCCAAATTGTC 1330117 30 100.0 35 .............................. CTATTATACTACGCAATAGACTTCCTAGGCAGGGA 1330182 30 100.0 37 .............................. CAGGGTGAGGAATGATATCGATTTAGAGGCAGGCTTG 1330249 30 100.0 37 .............................. CATGGATGGTGGAAAATGAAGTGCCCGCGGCGGCGGA 1330316 30 100.0 37 .............................. TGACCACGGCGGTGCTTAAGCTTTCAAGGGTTATGCG 1330383 30 76.7 0 .....................T..ACTTTT | ========== ====== ====== ====== ============================== =========================================== ================== 25 30 99.1 37 GTTCCAATAAGACTTTAAAAGAATTGAAAG # Left flank : TATAGACTTTATGAGGGATATTGAAAATTTTTCGTTACTCGTTTGGGAACTTTATTTTTCAGTTTTCTCCTTTGAAATTACTTTTCTTTAGATTTTAAAATCCCTAATCGATTTTTGGTCTTTTAATAACATTTTGTTATTATCAGATAAACGGTTATAAATTTTTATATTTTTATAACGAAATTTTTTCGAAATTTTGAACAATGGCCTCTGCAACCTTCTTTTGTATCTCTCCCTTATGGAGATTTAACTTTTTTGGATTTTTAAAGTTTTTAACTGTTTAAATTTAATTTGGTGCTCTTACTTTTCATAGCGGGCCCTATATCATTTTTTGTTCACTGTTGTGAGAAAGCTGAAACATAGTTATTTTGGATTAAACTCTTATGTGAGCACTTTATTTGAAGACTTTAGAGGGCTTATTTATTACCCCCTGCAATAAAGCTTATAAATTCTAAACTCTTTACTAGTTTTATAGGGAATTTAGGGGAAAATTCGCCCCT # Right flank : TTCGAATCTTTTACGTAAATCTTAAATATGTCAAATGGGTAATTTATAGTGAACTACCCACCTTCCCATGGGGGTATAAGCTTGCGGTTCCTAATACGTCTTGTCTCTGAAAATTCCGAGTTTAAGGTTCCTTACAATCATCAGCATTACCTTCAAGGCCTTATATATCATCGAATTCGAGGTGTAAATCCTGATTTGAGTCTCGCTCTTCATCGACCAAAAGTCCCAAAACTTTTCACATATTCCCTTTTCATGAGTGAAGAGAGGCAGTCTGCCAATGGCTCACCATATTTTATTGGGAAGGGGAAGGGCTTCTTCTACTTTTCAACGCCCATTACCGAGATAGCGGAAGCATTTATTGGAGGCCTTCTTCAAGAGCCAGACGTGGAGTTATGGGGGGAGAAGTTCTACGTGGAGGAGGTTAAAGCACTTGCAGAGCCTTCCTCCTATAGTGGGAGAACTTACTCGACTTTATCTCCAATAGCGGTGACTACATTAAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAAAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTCCAATAAGACTAAAATAGAATTGAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : III-B [Matched known repeat from this family], //