Array 1 18873-17892 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384676.1 Dolichospermum circinale AWQC310F 310F_Scaffold21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 18872 37 100.0 35 ..................................... GAGTTCAGGATCATAAAGCAAGTCGGAAAATTCCA 18800 37 100.0 34 ..................................... CAACAATATTTCTGTCTCATTGGTCGTCCCGGCG 18729 37 100.0 39 ..................................... GGGAAATTGAGAATGTGTGTGGATCGCATTTTCAGGAAA 18653 37 100.0 34 ..................................... GACCCTGATCTCATCCATGCTAAAAAACCCGGAC 18582 37 100.0 35 ..................................... AGCTTAAAAGTATTTTCGGCTTCTATTGTAAGCTT 18510 37 100.0 34 ..................................... AATTAAAGATCGGGATAAAATCTGGGCCGCCGCA 18439 37 100.0 36 ..................................... TTCTCCAAAATTTATTCGGAAGGACATTTTTCACCG 18366 37 100.0 36 ..................................... GCTGGGAAAGGAAATTTTCTGAGGGAATGGTAGAAA 18293 37 100.0 37 ..................................... AGTGTATGCTTGGGTAGTTGCAGCGCCTAACATATAC 18219 37 100.0 40 ..................................... TCTGAATTTCCTTTTTAAATGTTGGGGACGGAATAGCAGC 18142 37 100.0 34 ..................................... TAAATCAGCTAATTGTCTATTTAGCTTAATCAGC 18071 37 100.0 34 ..................................... ATTCAAAAACCAGCAATATCCCAAAACCATTGGC 18000 37 100.0 35 ..................................... AACAAGCAACGAAACGCTACAGGCTAATGACGTGA 17928 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 14 37 100.0 36 GGTGAAATTAGCTTTGAGTAATCAGGTTAATTGCAAG # Left flank : CTAAAATAAAGAAAGCCTTGAGTCAAAGAACTCATCGCTGTACAGAATGTGGCCACACAGAAGGGCGTGATTCCAATGCAGCAAAGAATATTTTACTCAAGGGCAAAAAACAATTACAAACAGTGTACCGCGCTTGGGCGTGGGAACATGGGGAAACCCGAAAGCCTGACTCTGAGTGTGAAACGCACTGTCATCAGGAAGGTGTGCAAGCACCACCGGAGGATGAACATTCCTCCCAATTAACCCTTGTAAGAACCCCCGCAAAGGGAACTCAGCGCGGAAGGGGGGATGTAAAAACCTCTACTCCTGCAAAAACAACCTCAAAGCTAGACACCGTAAGCGATCCGAACCTTGACAATAAGCCAGATACCCGCGCACCTTGCACATCAAGCATTTCACCGAATTCAGTGGAAAATAAAATTCCCAAAACTAAGAAAAACAAGAGATCCGCGCAATCATCATCTGAAAGCTTTACACAGCTTACTATCTGGGATACGGCA # Right flank : ACCAGAGACAAATTATTAATACTACACACAGCTAAATGCAAAGCATCTAAAGTTCTTAAAGGCAGATCAAACCTGGATATCCAGTCTCTAGCTAAACGGTAATGTTGATTTTCCAATAAAACAAGACCATACAAACCTTCATTAAGATGATTTTCAAACAATTCTGTAATCCGTCTAGCGTCATTTTGGGAAACTTCACCCATTCTTACCCTACGAGATAAGGCAGAAAATAATTCCACCTCAACTAATTGACTAATGATCGGTTTATCTTCTTGTTTTTGTAATAGTTGTTCAACAACAGCACTTAATTTTTCAGGCACATAATAAGGAACAATGGCGCTAGTATCTAAATAAATCAATATCTTTCGTTCTCTCTTTCTTCTAATATCGTGGTACTCATTGAACTTCCTTTTAAAACTATGGATTTTCTAAAATCGTTTAAACTAGGAAATACTTTTTTTACCTGTTGGGGAGGAAGAAGACGAGCAATTTCTTTGCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGAAATTAGCTTTGAGTAATCAGGTTAATTGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 58910-59758 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384677.1 Dolichospermum circinale AWQC310F 310F_Scaffold22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 58910 36 100.0 41 .................................... GTAGTCCGTCCGAAAGGAAACGTAAAACTTACATTCGCCTT 58987 36 100.0 37 .................................... TCTATTCTGAGATGTCAAGTGTTTTTGCAAAATTTTC 59060 36 100.0 38 .................................... TTTTTGTGTACCACAATTGAATTGCAGTCATTTTCTAC 59134 36 100.0 37 .................................... GCGCTTTAATCAATGCCTTAATTAATTCGATCATTTG 59207 36 100.0 38 .................................... CATATTCCTAGATATTGGCGTTGAAACTCTTTTAGCTT 59281 36 100.0 37 .................................... TATTAACCGTGATATAGGTCTTTGAACACTAAGTAAA 59354 36 100.0 35 .................................... AAATATCATCAAGTGAATCCGTCAACGCCTTGTTT 59425 36 100.0 37 .................................... CGTATCTTCCGGACGCACCTGCAATATCATGCCCGTG 59498 36 100.0 37 .................................... TACTCAGCAGCCTTTTTCAAAGCTACTTCAACTTCTG 59571 36 100.0 37 .................................... TCGTTTTCCAAACGAGGTCGCCATAATGAAATTGAAC 59644 36 100.0 43 .................................... GCAAATTGATTTTGAGCGTAGTAAATTTTAGTCATTTAAATCT 59723 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 12 36 100.0 38 GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : TATTCTGTATTTGAATGTCAGTTAAGTAGGGAAAAGTACAATGATTTCCGTCGTCGGTTAAGGAAGATTGTCAAGTTAGAGGAGGATAATGTCAGGTTTTACCCTTTGTCTCGACATACTCTTTCCCAGGTGGAAACTTGGGGGGTGGGTGTGCCTGTGATTGAGCCTCCGGGTTCAATTATTGTGTAAGTAGATTGGCGTTAAAAATTGTCGTTATGACAAGGGAACAGGGAACAGGGAACTGGGAACAGGGAAGAGGTTTTAAGCAACTTTACCTTTCGTTACTTATGTCGGTTTTTTTCCGTTCACCTACTTAGTTTTTCCGAAGGTCAGGTAAAATGGCTGTAATGTTGATTTTTTGGTTGGGAACTTCGGTCGCTTGCTGGGTAGGGGTTTTGGGGGGTTTTTTCCGCTGTCGGTTGGTGGTTTTAACACTTTTTTTCCTGACCTTCGGAAACTGTCTCTGGACACCTTGCTGGGTAAGGGTTTAAAATTGAGGG # Right flank : CAACGCTCATCAGCAGTATATATAAATACATAATAAAATATGTACTGATATTTTGAGAATCAGTACATTTTAACTATCAATCAATGTTTGGTAAGGGAAATGCTGTAACTTGATAGCAGCATAAACAAGAACCAATGTCAAAGAAAATAAAATATTTTTAATAAAATCCTCAAAGTCAGGAAAAGCGTACAGAGTAAGGGTTAGAGCAAATATTACAAAAATCTTGAGATATTTTAGATTCCTAGACAAACACTGAATCGCGCTCTTATAATTCATCTATAAGCTAAACAGGGGATCTACCGATGACAGAAGAATATTGGCGGGCTAAGATTTGGGGGTTACTACATGACCCTGTATTAAAGGCGTTACATAACAATAGCGGACGGGGTAAAAGTAGCTTCTATGAACAACTAGAAGTAATGAAAGCTTGGGTTGAGACAGGTAAAACCCCAGATCAATCAGGTGGTAAAGTTTTAAAAAATATCCTCTTAGCGGATTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 5778-3680 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384694.1 Dolichospermum circinale AWQC310F 310F_Scaffold38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 5777 37 100.0 38 ..................................... ACGCCTGTTACGGGGGGGGGTAACAGACCCGTAACAGG 5702 37 100.0 34 ..................................... CGCCTGATAATGGCATTGGAATTTGATATTGATA 5631 37 100.0 37 ..................................... GATCCCTGAGATCCATCCTACTCTCTAGCCGCCTTTG 5557 37 100.0 40 ..................................... TACCCCATGAGCAGCCCAGCACGGCACTAAGTCTTCGGGT 5480 37 100.0 38 ..................................... GGGCAAGTTTCTTTTCGGCTGATGACAGAAAATGGGCA 5405 37 100.0 34 ..................................... GCATTTTGACGCAAGCATCAAATTAGACTCAACT 5334 37 100.0 41 ..................................... ATACCAAAGATAGCTGCGGTTGAAAGCGTTGCTACCGGGGC 5256 37 100.0 34 ..................................... AAAATTCTTGCATCGGGGAAAAAAGCTAAGATCA 5185 37 100.0 35 ..................................... CCCCTGAACTGGGGATAGACACAACATTAAATGAT 5113 37 100.0 33 ..................................... AAACGATGCCGACAAAACCTTAGCTGGCTTCCG 5043 37 100.0 36 ..................................... GAAATCTACCTAATAAGGTAATTATGTCCAGAAAGC 4970 37 100.0 37 ..................................... AATTATGCCCCCAAACTTATCTTGAGATTTGACAAAA 4896 37 100.0 33 ..................................... AACTGATAGCGATCGCCCATTTGTTTCTGAGAG 4826 37 100.0 42 ..................................... TTGCAATAATATCCTTCCAGATAAAGCCATAAGCAAAGGATC 4747 37 100.0 37 ..................................... CAAAAAACTTGGATCTACATCGTGATATTTGCGTGAA 4673 37 100.0 41 ..................................... AATTTTTCGATTTTTTCTGCAATTTTATTAATCGCTATCGT 4595 37 100.0 38 ..................................... TCTTTTAATCCGGAAAAATATTAATGATTGAAAAAATC 4520 37 100.0 36 ..................................... AGAGAATTTACCATATTCGCGCCAGCTTGATAAATT 4447 37 100.0 39 ..................................... CCCGAGCATATTGTCCAGGGACACTCCAGTATTGAATTG 4371 37 100.0 35 ..................................... TTCGCCTACTACTCCCCAAGTTTTTAGGGCATTTG 4299 37 100.0 35 ..................................... GGAGGAAATATTGAGCAAAGATTTATATCGGGATT 4227 37 100.0 33 ..................................... TAATGAGAGAAATGGCGCAGATGCACATCGCGC 4157 37 100.0 37 ..................................... GCACCGCCAACGGTCAATCCCGAGATAAATCTTTGCT 4083 37 100.0 34 ..................................... TTATACGGGAAAAGATATTTCTTCTGAGGAGCAA 4012 37 100.0 39 ..................................... AGCAAGGAAATGAGAGCGATCGCATCCGCACAAATCTCC 3936 37 100.0 36 ..................................... GCTGATTGGTTTGGACCCAATCCGCGACCTCCTAAC 3863 37 100.0 35 ..................................... ATCAACATTGTTGACGATGCTGCCAGTGTTGACTA 3791 37 100.0 37 ..................................... TATGAACCACAACACAAATTTCTGTAAATCTGTGGTT 3717 37 94.6 0 ..........C.....A.................... | A [3700] ========== ====== ====== ====== ===================================== ========================================== ================== 29 37 99.8 37 ATTGCAATTTAACTTACTCCCTATTAGGGATTGAAAC # Left flank : AATGTTGTTATTTCTTACGATATTTCTGAGGATAAACGGCGGACTAAAATCCATAGCATTCTCAAGTCCTATGGTCAATGGGTGCAGTATAGTATTTTTGAATGTGAGTTAACTGATACTCAATATGCTAAGTTAAGATCGCGTCTTAATAAACTCATTAAACCTGAAACCGACAGCATTCGCTTTTACTTCCTTTGTGCTTGCTGTTTTGGTAAAATAGAGAGAATTGGTGGTGAACAACCCCGTGATCAGACAATTTTCTTCGCTTAATAATGCGCGGATGGGTGGGTGTAAAAAATTCAGATGAGGAAAAAATGCCTGAAATCATTTCTACACAAGCTTTTCATGGATTTTATGGAGTTCACCCATCCGCGCACCTTACACAGCAGGAGTTTCAGCTATTTTACCCCTTGACACTTTTTTTGAAATGGATTATTATCAGAATATCCGCGCAACTGAACCTTGAAAACTACATATATATAGGCTTTCAGCATTCCACA # Right flank : GAAAATTGCGGGAGGCGATCGCAGGTGGTATGATTGCAATTTCACTTAATCCCCAAGATATTGGATTTTGGGCCTTGCTGAATTGGGGTATGAAATTGAAAAATCAAAAAAGTGAAACTCTTACCCTCAAAAGACTCTGCGCCTCTGCGTGAAATAAAATCATACTCTTAATCAGTAACGCCGGATTTTGTTCCTCAACCCAAATTACATAACTTATTTCGTCGGTAATTTTGGATGTTCTTGGGAGTATTTACTGACTAGGTTGGATACTTCTGGGTTATAAAGTCGCAGGTAATTCCAGTAATTACCGAATACTTGACGGACATAATTTTTGGTTTCATCAAAGGGAATTTCTTCCACAAATTCATCAGGATCTGTTTTGGGTATGGTTTGTAACCATTTAGCCACGTTACCCGGACCTGCATTATAACTAGCGATCGCTAACATGGAATTATTGTTATACTGTCGGTGAGTATAATCTAAGTACCAAGTCCCCAACA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTAACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //