Array 1 17815-19643 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMTL01000004.1 Vibrio cholerae strain OYP2D07 Vc_OYP2D07_Contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 17815 28 100.0 32 ............................ ATCGATCGCGCACACAAGAAGAACGTTAATGG 17875 28 100.0 32 ............................ GATAAATCAACTCCCCAATAATCACCCATATG 17935 28 100.0 32 ............................ TGTAATGGTTTCAACGTATTTTCTGAACTCGC 17995 28 100.0 32 ............................ AGCTTCAAGCGTAATGATGAAACACGATGGAG 18055 28 100.0 32 ............................ ATGCAGATGTTGATCATTGCCCAATCGTCTTT 18115 28 100.0 32 ............................ TTAATCAATGTTTCAGCAATCGCTGTAGATGC 18175 28 100.0 32 ............................ TCTAACGCTGTGCGGGCACCTATGCCATCCAA 18235 28 100.0 32 ............................ ATCAACGTACTGGCTATGGCGAATACGGATGT 18295 28 100.0 32 ............................ ATCAACGTACTGGCTATGGCGAATACGGATGT 18355 28 100.0 32 ............................ AACCAGTAGAAAGCGATGATGATGGCAATCTT 18415 28 100.0 32 ............................ TCAGCGACCTCGGCCATCAGTTTAAGATCGCC 18475 28 100.0 32 ............................ TGCGTAAACCAATGGCGATCCCACTCGAACCT 18535 28 100.0 32 ............................ AAGTTGGCCCAGGTGAATTGATTCACCCATGG 18595 28 100.0 32 ............................ TGATACTGCCGCATTTTATGAAAGCACAGCGC 18655 28 100.0 32 ............................ TGTTAGTTTGTCCAGTCGTACTTGCTATCTGA 18715 28 100.0 32 ............................ AGCATCTTTTCGATGTTGGTGTGAGCCATGAT 18775 28 100.0 32 ............................ ATACATCACATCAGAGGTGTAGGCCACGGCTT 18835 28 100.0 32 ............................ TTTATTCGGCAGTTTATTAAATTTGTCGAATT 18895 28 100.0 32 ............................ ACTCTTCGGTCGTTTCCCGTTCACGCTCTAAC 18955 28 96.4 32 ...........C................ ACGGATTTGTTTAGTTTCCTGTTCTAGATCGC 19015 28 96.4 32 ...........C................ AGTATTTGCAGCCATGCGCTTTTTGGGTCTTT 19075 28 96.4 32 ...........C................ TGGTGACTCAATGCCGTTATATAGAAAAAATC 19135 28 96.4 32 ...........C................ ACTTCTTTTTGCAGCTCGCGCTCGCGCTTGGT 19195 28 96.4 32 ...........C................ TCCAGTTCATCTTTAAGCATCTTTTTGTATCG 19255 28 96.4 32 ...........C................ TACTCATATCTACCACACGAGGTTTACGTGGA 19315 28 96.4 32 ...........C................ GTTCGGGTTCGGGAATATGATGTAATTTGCTA 19375 28 96.4 32 ...........C................ TATGAAATCAAGCTGTAGGTGCAATATGGAAA 19435 28 96.4 32 ...........C................ AAGCGGCGATTAAGACGACGGATAAACACTTC 19495 28 92.9 32 ...........C............A... GTTTGAATCGTACAATTGCAAACCATCAATAA 19555 28 96.4 32 ...........C................ AAAGTGCCAATCAGAACTCCCAATAACGTCAA 19615 28 89.3 0 ...........C..........G.A... | T [19635] ========== ====== ====== ====== ============================ ================================ ================== 31 28 98.3 32 GTTCACTGCCGGACAGGCAGCTTAGAAA # Left flank : AAGCTTTTTGAATGATCTACAAGGTTTATGCTGGTTAGGGCCTCTCAGCGGTTATTGCCAAATCAGTGAAGTGTTAAGCGTTCCTGAGCAAGTTCAATACCGGGTGATCTCAGCTAAGCGCCGTAATTTAAGTGCTGCGAAGCTGCGCCGTTTAATTGCACGAGGGAGTATAAATAAAGAAGGTGAGCAGCGTTATAAAAAGAAGATGCTGAATCAGAGTATTAAAGGTCCATATCTTGACTTACTCAGTAGCTCGACAGGACAAAAATATCGTAAATTCTTTGAATTTGGTGAAATTCAGGACGTGCCTGTACTTGGAAATTTTGATACCTATGGACTAAGTCTTAAGGCAACAGTACCTTGGTTTTAACCCTATTTTTTCGCTCTTTAAAAATATGCCTAAAATACAATGAGTTACAATAGGTGTTTTTTAACAAGGTAAAAATACAATTTTTACCCTAACTGACTGTTGTAACTTACTTTTATAGATTTATTCTATA # Right flank : ATCCTTATATATCTTATGGTTGCAGATCTCAAAAGTTGGGGTTATATAAATGACAGTTTGCTTTGAGATTTCCCGCTTACTGGCTGTATATCCAAAAATGTGTTAGCGTTTCCCACACTAACACCAGTCTATTAATTAAGCCGCTGCCCTTCGGGGTGGCGGTTTTTTTATGCCTGAAATTTGGAGCCGCACATGCAAGACAAGAAGTTATTGGGCGATGAACTCTCACCAAAATCGACCATTAATGCCTCTACGGATATGAGTCAGTCTGCCTTTTTACCGAAAGGCTTTCAGTTTGAAGCCCCTAAAGCGCCGCAACGTAACTACGATGTGACGTTAGGGGATACCGCTAAAGCCGTCGGTAGTGGCGCTCTGCGCTCACTGGCCGGCCTTGGTGAACTCTCGGAGAACTTCCTTGGTGTGGGTGAGAGCTTTCGAGATTTGATGTCGTCTGGCTCTGATTATCTGCAAGAGAGTATGACTCAAGATGGCCGTGACGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //