Array 1 2758-1479 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRGI010000046.1 Prevotella copri strain HDE06 HDE06_46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2757 36 100.0 29 .................................... TTAAGGCACGTAAGAAGTTGGAGTTTTAG 2692 36 100.0 31 .................................... ATGATGGTACGGGCAGTTATGAAACTAATAG 2625 36 100.0 30 .................................... AAAAGAGCCAAAACTTCCACCTGTTGCCGT 2559 36 100.0 28 .................................... TTGTTGAACCATTTAAAGCAGATTTGAT 2495 36 100.0 29 .................................... GTGAGAAAGCAGAATTTAGATATTTTGCA 2430 36 100.0 28 .................................... TGGTGTATGTTCTGCCAATGGTTTTGAT 2366 36 100.0 29 .................................... TTAATATCGTGACTGGAATACGATCAAAT 2301 36 100.0 29 .................................... ATATAGATTTCTACTTCTGCTCCGTTATC 2236 36 100.0 28 .................................... TGGTACGAAACGAAGTAGGTTCTCTTTA 2172 36 100.0 29 .................................... CCAACCAATTTCGCCCAACACCTTATTAA 2107 36 100.0 32 .................................... ATCGGAAACGTCCATTGCTTGTTACGCATCAC 2039 36 100.0 29 .................................... GAGATTACTACAGAGCAAAAACAAGAAGA 1974 36 100.0 29 .................................... ATTGCTCAAAAAGAATCAGGCTTTAAAGG 1909 36 100.0 31 .................................... AGAACGAGCAGGGAGCATTGACAGAGATATA 1842 36 100.0 28 .................................... TCAGCGACTTGGAAAAGAAAGTCTACAC 1778 36 100.0 29 .................................... GTGACCCTGTAGAGTTCCCAGCCAACAGC 1713 36 100.0 30 .................................... AACACTCGGGTACCGGTCAATGGTTACACG 1647 36 100.0 30 .................................... CGGGGGCGAAGGGGGTTGATGTGTGATATG 1581 36 100.0 31 .................................... AATCCACGCACCCACATAGGATGAGGATTAA 1514 36 80.6 0 TAT.......T..TC............G........ | ========== ====== ====== ====== ==================================== ================================ ================== 20 36 99.0 29 GGCTAGTAAGCTTCAATAATTTCTACTATTGTAGAT # Left flank : CAGTAAAAGAATATCCAATATTTGAGTTTTAAATGATAATAGTTAGTTATGATATTTCAGATGACAAGATGCGTACCAACTTCTCTAAAATGCTCAAAAGCAATGGGGCTATCCGTCTTCAGTTTTCTGTATATGAAGTAAGAAACACAAAGAGAATTATGGATAATCTTGTTGCAAAGATAGAGGCTTATGCCAAACATTTTACAGCTGATGATAGTGTAATTCTCTTTGGTGTAGATTCTGATAAGCTTACTAAGTATGGTAATGCTATTCATAGAGATCAGGCTATAGTCTATTTTTGATTGTGCAAAAATCTGTTTTTGATATTGCAAACCTTGGTCTTTATATTTTTGTGATAAAGTATATAAGTTGCTTATTTACAGGTCGTTCTTTGAAATATTTGATTAAACCTTAATGGGAGGGGTGGATAAAATCTCCAAAATATTCAAGCAAAAAAGCCTTTGCTTCAAGGATTTTTTGTATCTTTGCAGTCGATAAGG # Right flank : AATTCCATAAAGGTGCGATTAAGTATGTTTGTTGCTTGGAGATGTAAAGTTATGCGAAAATATGGTGTAAGGATGAAAAAATAATTCGAATACAAGGGAGACGCCCGACAAGAAATCAGAATAATTTCTTGCTGGGCGGATTCCTTATATTTCAATAATCATAAGAAGTTCATTCTCACACCACCTTCACAATCCTTCTGCTGTCGCCGGCAAAAAAACTTAGCATAGTCTTTTTGCTCAATTTGCTTTATCGCAGCCTTTGTCTTTCATACTATACTATCAAGGTATAGTGAATTGATTCCAACCTTTAAAAACATCAAGGAATCGGCCAATCAATTAGGTTTGGAGTTTGATGTAGAGTATGGCTATTATATTTTGTACCGGAGTGGTTGTTCGGAAATTCCGAATAACCACTCCGAATTACAAGAGTAGATGATGTGGATTCAACAAGCGAAACTTAAATCTTGGTATCGTTTGCAGTGATAGTATGGTATCGGTAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAGTAAGCTTCAATAATTTCTACTATTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //