Array 1 21903-20655 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWGV010000016.1 Streptomyces sp. DH1 NODE_16_length_124802_cov_43.292392/1-124802, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 21902 29 100.0 32 ............................. GTCGATGAGGATCATGTCCGGCTGCAGCCAGG 21841 29 100.0 32 ............................. GCCTGGCTGGCCGCCCCCGGGACCGCCCCGCT 21780 29 100.0 32 ............................. TCGCTGGGAACCGTGGGGTCCTCGTCGAGGTC 21719 29 100.0 32 ............................. CAGGCGCGTCCGCTGACGGAGCAGCGCGAGCA 21658 29 100.0 30 ............................. GCCCAGTTCGACCACCAGCACCCGGCGATG 21599 29 96.6 32 ............................A GACACCGTCGCCCTTCGCGGACCCCTCCAGAA 21538 29 100.0 32 ............................. TCCTCCATGAGGTCCAGCAGCGTGGACGTGGC 21477 29 100.0 32 ............................. GGGTCACTGCCGACGTCGTGGCCTGGCTGGAC 21416 29 100.0 32 ............................. AACGCATTCGGCACCCTGTAAGGAGGAGGCTG 21355 29 100.0 32 ............................. ACCGGGATGCAGTGCGACGTGTGCGGCGGCGT 21294 29 100.0 32 ............................. GACCGCCCTGGGTGCCACCAACGCCTCCGTCA 21233 29 100.0 32 ............................. TGGACGTCGTAGACGATGGTGGTGCCCTGGTC 21172 29 100.0 32 ............................. GGTCCCTCGCGCGGCAAGCTCTGATGAACCGT 21111 29 100.0 32 ............................. GCGTCGTCCTACCCCGCCAGATCCCCTACGGC 21050 29 100.0 32 ............................. GACGTCGCGGGCCGCCTCTACGTCGGCGCGGA 20989 29 100.0 32 ............................. CTCAAGGCCGGTCTGGCGTCGTGGGTGGTGGC 20928 29 100.0 32 ............................. GACGTGCCCGCAGGGTCGCCCTCCCGGTCGCT 20867 29 100.0 32 ............................. ACGGTCCACCCGGCCGGTAATCGGGACAGCAG 20806 29 100.0 32 ............................. TGGGCGAAGCCCTCGCTGTTCTCCAGGCCCTG 20745 29 100.0 32 ............................. TGTGCGGGAACTTGGACCAGGCGGTGCAGTTG 20684 29 82.8 0 ...............T...A.G.A...G. | C [20659] ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AGGCATCAACTACGACGGTCCAGAGGACTACGGAGACAAGCTCTGGTGACCGTCATCGTCCTGACCAACTGCCCAGCCGGCCTACGCGGCTTCCTCACACGCTGGCTACTGGAGATCTCCGCCGGCGTGTTCGTGGGCAACCCCTCCGCCCGAGTCCGCGACGCCCTCTGGGACGAAGTCCGACAGTACGCGGACCAGGGCCGTGCTCTGCTGGCCCACACGACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCGACCGACCACGAAGGCATCACCCTGATCCACCGCCCAGACCCGAACGCACCCACCGCCACCCCAACTCCCCGGAACGGTCCGCCATCCGGCTGGAGCAGAGCCTCCAAACGCCGACGCTTCGGCAGAGGCTGATGCAAGCCGAGTCACGCATGCCCCATTTGCCGGAATCGCAGCAAGTGCTCGAGAACGGCCTGCAGCGCCAGTAAAGCCGCAGGTCACCCAGT # Right flank : GATCTGGGTGGGTCGGCGGGAAGGTCCCCCGCGACGAGGCGACCAGGTCGTCCCGGCGCCAGCGAGAGTTGTCCGGTGGTGCAGGCCCACGCCGACTCGGTATCAAGTCGTCCCCACATCTGCGGGGGTAGCTCAAAGGCCGGGGCCGGCGAGCACACACCGGGCCAGTCGCCCCCCACCCCCGTGGGAGTTGCTCCGCACTGATCGGCTCGCCCCGGACGGCGAGGCCGTTGTCCCCCCCCCAACCGCGGGGTAGCTCTGTCAGCCCCGGCTCGTACGGTGATCGCGAGGTGTCGTCCCCGTGCCGGGGGAGGATCCCTGGAGCACCTGATCAGACGGACGCTGGGCTGGTTGTCCCCGCACTGCGGTGGTAGCTCCTGTTCGACGGTCCGCTCGGGTGGGCACACCAGGTTGTCCCCTGGGAGCCATGCCGATGGCCATTACGACAGCTCCCAAGGGATGTAGCCGAGGTTCAGGTGCCCGAGTCCAGCCAAGCGCTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 31636-32700 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWGV010000016.1 Streptomyces sp. DH1 NODE_16_length_124802_cov_43.292392/1-124802, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31636 29 100.0 32 ............................. TTCGGGCACGAACCGCGCAAGACCCGCAAGCG 31697 29 100.0 32 ............................. TCCGCACACGACGGTCACATCGCGGCCGATTC 31758 29 100.0 32 ............................. GAGGTGTCGACGGTGCCGATGGTGACGGTCTT 31819 29 100.0 32 ............................. CTGCACCCACGCCACGCACCGCGACAGCTTGG 31880 29 100.0 32 ............................. CCTTCGGTCGTATCAAGCCGCTCGCTTACTGG 31941 29 100.0 32 ............................. CGGGCGGCCGGCGCGGCGTATCAGGCGTACGC 32002 29 100.0 32 ............................. CGGCACGACAGCCTACGACCGGCTGCAGGCCG 32063 29 100.0 32 ............................. GTCACCCCGTTCGAACTCCTCGGGCGGATCGG 32124 29 100.0 32 ............................. GTGCCGGCCGCGTACAGCATGAAGTCGACCGT 32185 29 100.0 32 ............................. GGGACGCCGGCCCGCCCGAGCGCGAGGACGGC 32246 29 100.0 32 ............................. GACGAGGAGAAGTCGGGCCTGATCTCGCGGGC 32307 29 100.0 32 ............................. ACCTGCGTCTCCCCGGCGGGGATGGTCTCGCT 32368 29 100.0 32 ............................. GTCGAAGAGGGCTCGTGGGTGGAGCAGAAGGA 32429 29 100.0 32 ............................. GCGCCGAGCTTGCATGCGGCGGCGGTGCGCTG 32490 29 100.0 32 ............................. GCACGCTGAGTGTCCTCAGACTTCGTGCCGAA 32551 29 100.0 32 ............................. GGATTGATCCACCAGCCTCACCCGGCTGACTG 32612 29 96.6 31 .............T............... GTTCATCGGGATCGACCCACCACGGGGGACC 32672 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.8 32 CTGCTCCCCGCACCCGTGGGGATGGTCCC # Left flank : CTGACACGCGAACGCCGGGGTGGCCTTGCCGACGTCGTGCACACCGGCAAGCCACACTGCAAGGGCGCGTGCGTCCAGTTCCCCCTGCGGCAATGCCTCGGCGATCAGCTTCCGCACCCCCACGGGCAGCCACCGGTCCCACAACAGGCCGGCTACTGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCAGCCATCGGTGTCATAGTCGTGTTTGGCCCACACCGACCTGGCCGGCTCCCCAAGCCGACACAGCAGGCCGGAACGGGCGTTCCCCCCATCCCTCATGAGGGATTAATACAGGGAGAACCCGGTCTCACACGCCGAAATGAGAAAACAGAAGGATTCACAGGAAGACGGCGTCTTCGAGTCGTATGATTATCGGCCGATCCTGGAAGTGCCTACGGGTCAATTGTTGCCTAATGTCCCACTTGTCGGAATCCATGAAAGTCGCGGAAAGTACACCTCTGCGGCCATAAACTCGCAGGTCAAGCAGT # Right flank : CTGGCGCTGCTGCTTGGTAATGTCGGCGGCTTCCTGTAGCTCCTCCCCGGACGCCATGGTCGCCAAGTTCGGATGATCCTCGTTCACGACGAAGGCCGCCGCCCTGTGCTGGGTGACGGCCTTGAGTCACAGTCGTCGCGCAAGCGCAGCGCAACAGCGAAGCCCGTCGGGGGTCTACAGGCGGGACGCCGGTGTACTCCCGACGTCCCTGGCCCCCTCCCCGTTTTACAGGTCCAGCCACGCCAAGAGGACCTTGGCGAGTACAGCCGCCGTCACACTTGAGCTGACCTGAACGAGACCACGCAGCAGGTGGGCACGCATCTTCTTACGGGTGTTCTTCAAAGGGATTCCCTTCTCAAACCGGCCCGCCCCACCGTGCGCCGGGGGCGACTCCGCCGCGGCAGACCGCGGCGCGCTGCGTCCCCGTTCGCCTGGCTGGGCGGATGAAGCTTGGGAAAGGGCCTGCCGGAACATTACCGTCCTCGCACGGGCTGGCGGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGTGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //