Array 1 59597-54304 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLTX01000036.1 Xanthomonas bromi isolate LMG947, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 59596 31 100.0 35 ............................... ACACTCCCGGGCATCTTCTGATGTGGGTCGATAAG 59530 31 100.0 36 ............................... TTACCCTGACCCTGCTACGGGTGGGGCACCCTGGAC 59463 31 100.0 34 ............................... ATCAAAGCGCTTACGTCCCGCCTTAACAGCAATG 59398 31 100.0 35 ............................... GCCTTGACCGGGCGTGGCCTGCAGATGCTGCGTTA 59332 31 100.0 33 ............................... TCAGGTGGTGCCCTGGATGAGTTGCGGATGGTG 59268 31 100.0 35 ............................... TAATGCTCCCGACTGGCAGGCAATGACGCCTATCG 59202 31 100.0 35 ............................... TCTCTATAACTCTGCGCCTGTAGCTGGGAACAACT 59136 31 100.0 34 ............................... TGGTCAGGTGCTGACTGGCTCGGATGCAGTGATG 59071 31 100.0 35 ............................... TTCCAGTCCTCGTCCACGTGATGCACGTGCAGCCG 59005 31 100.0 36 ............................... TTTGCGGGCATTGTGATGCGTCAACTACGGCCTGGC 58938 31 100.0 35 ............................... ACGCCGTCCGAGCGCCGCTTGCTGCAGGCGTGCAT 58872 31 100.0 34 ............................... CGGGTCGCGATACAGGTCGTAGACCGTGTTCGCG 58807 31 100.0 33 ............................... ACGTTAGTGCAAGTTTGGTGTTGACAGTGACTA 58743 31 100.0 35 ............................... AACTTGAATCGCGACAACCGCAACGTCGGCGTGGT 58677 31 100.0 35 ............................... TCATCCCGCGACATGCGACCCGCGAACCCCTGCGT 58611 31 100.0 34 ............................... TGACCCGGGCGTATACAGCACGGCAGCCGACGTA 58546 31 100.0 36 ............................... CCAACCACGCCTGCTCCAATGCGGGTTGTGAAATAA 58479 31 100.0 37 ............................... CGCAGTGGGTGCACCTGTCTCGGTGCACCGGCAACGG 58411 31 100.0 35 ............................... AGGTGGCAAACAACAGCTTCAAGCCCGCTGCCGAT 58345 31 100.0 34 ............................... GCCTGCTGCACGGTGTGAACCTGCCCGGGTAGAA 58280 31 100.0 34 ............................... ATCAACGCCCGGTTGCTGCGGGGCTTGGAAGTGG 58215 31 100.0 33 ............................... TTGGTTGGTGCGTTTGATGCGGGTGCCCAGATC 58151 31 100.0 34 ............................... GGATACATCTTGGCACAGGAGGGCGGGGCCGATG 58086 31 100.0 35 ............................... CAGTTGACGTGCAGCCCGGCGAACATCCGCATATC 58020 31 100.0 34 ............................... TCCGCTAGTGTGGTCGTGGATGTCGTAGAACTTC 57955 31 100.0 36 ............................... CCAACGAGGCCCCGGGCCTTAGCCGGGTGACTTCTC 57888 31 100.0 36 ............................... CGGAACAGTGCGAGCCAGAAAGCCGTAAAGACTATC 57821 31 100.0 37 ............................... TCGTGGACGAGCTGCACCTGCTCGGTAAGCGCTCAAA 57753 31 100.0 36 ............................... TGGAGTTGCCGCAGCGGCGCCTGTACGTACGTGACC 57686 31 100.0 34 ............................... TCGGCGCGCGGTGCTTTGTTGAGTTCCATGTCAT 57621 31 100.0 36 ............................... ACCTCCCCCTTGTTCTTGCCACCTGCGAAGGTAAGC 57554 31 100.0 36 ............................... CTAGTAGCCGCACCTGTCTGTACCCTCCGTTATGCG 57487 31 100.0 34 ............................... ACTGCGCAGCACTTCCCCCAGACAAAGGCGGTAT 57422 31 100.0 34 ............................... TATCAGATGGGCCTAGGCCCTGCACACATTGCCG 57357 31 100.0 34 ............................... ATGCTGGACGGCGGGAACTTGCCGAACACGTTGA 57292 31 100.0 37 ............................... CTCGCCACGAATGCCGCAGCTGATCCGCCCGGTTCGC 57224 31 100.0 33 ............................... TGATTTGTAGGGCGATACACGGGTGGTATAACT 57160 31 100.0 36 ............................... CGCCGTGGAACCGAGACACGAACGCGCGCTTAATCG 57093 31 100.0 36 ............................... GGTAACCAAGCCCACCTTGTATGCGCTTAGCGGGTG 57026 31 100.0 34 ............................... TGGTCGTTGCTTCTGCCTTTCCCAAACTTGATGC 56961 31 100.0 36 ............................... AACACGTTTTTCCCCGCCGGCCGTGTGGCTGGGAGT 56894 31 100.0 36 ............................... GCCCCGTGCGTCCACAGCCTTAGCCGCCGAGTACCA 56827 31 100.0 34 ............................... CTCTCGTGCACGCATTACCCGGTAAGCGGCGTTA 56762 31 100.0 35 ............................... CATCACTGCCAGACCCAACAAACACGATCCCGCCG 56696 31 100.0 33 ............................... TAGCATCGCTGCTTCTAACATAGCCGCCGCGTC 56632 31 100.0 34 ............................... AGGTTGATGGTGATAGGGCCTGCACCTAGCTTGC 56567 31 100.0 34 ............................... TCCTACGACCCGGAGCTTGGCACCTTCCAACGAC 56502 31 100.0 35 ............................... AAGGACAACGTTCAGGACAGTGTGGAGACGGGTAG 56436 31 100.0 34 ............................... CATCTTCTCCAGCAGCCAGCCCGGACGCTCGGGC 56371 31 100.0 35 ............................... TCACTTACAGTAACCCTTGTGTTTAGCTTACCCGG 56305 31 100.0 36 ............................... CCTCAATCCCCATTGGAGGGAAGCGCAGGCTGACCC 56238 31 100.0 34 ............................... AGTTTCCCTCGAGCTCCAGTGCCCTAGCCTTGTG 56173 31 100.0 35 ............................... TTTAGGCTTCTGCCTAACGTGCCGGAGGATGGCAT 56107 31 100.0 34 ............................... AGGAGCTCGATACGCGCCCAATCAGTGGGGTGCA 56042 31 100.0 35 ............................... TCCACCATCGCACCGCCGCGCTCTTGCAGCAGGTT 55976 31 100.0 34 ............................... TTCCATCGGTGTTTGCCCAACTCGATGTACTCAA 55911 31 100.0 34 ............................... TTCCATCGGTGTTTGCCCAACTCGATGTACTCAA 55846 31 100.0 34 ............................... GCCTTGGTCTTGTCTAGTCCCGCGTTTGCTTTGT 55781 31 100.0 34 ............................... GTGCTACAGGTGGAGAGGGAAGTGTTCGGGAGAG 55716 31 100.0 34 ............................... CGGGGTATTACCTTCCATTCGTTATTTCCTTAGC 55651 31 100.0 34 ............................... TGGCTTCTTTTCTTCGTCGTGGGGGATTGCTTCA 55586 31 100.0 34 ............................... CTGGGTCGATTCGCTAGGCAACACCTATCGCATC 55521 31 100.0 34 ............................... TGGCTCTCCATACCCGCTGCCGCCGTCGCCATCG 55456 31 100.0 34 ............................... CGGTCTCGCCGTCGCCTTTGGTGTAGGCGTGAGG 55391 31 100.0 34 ............................... ATGGCCATGCGTCCGATCTTGCGACAGGCCACCT 55326 31 100.0 35 ............................... CTTACACAACTATTGCGAGCGTTCCAGAATGTGTT 55260 31 100.0 36 ............................... TTACCAATGAATCTACCGGAGCTGCGCATGGAACTG 55193 31 100.0 34 ............................... TAACCACCTGTCGATAGCCTGGCGCACCGACTGG 55128 31 100.0 35 ............................... TGCGTCTGAAGGTCGGTCTTCCCGCCCTTGCTCGC 55062 31 100.0 36 ............................... TCGCCGTGCTGGCGCACCATCTGAATCGCCGTGGTT 54995 31 100.0 36 ............................... CAGGATCGCATCGATATAACGCTGCGGGCTGAATGG 54928 31 100.0 35 ............................... TCCAACCACCCGCAACGCCCACGAACCGGTGACAG 54862 31 100.0 36 ............................... TAGCCGATTTAGCGTCTCAATTTTTGCGCGATTGAG 54795 31 100.0 33 ............................... GGATACCACCTAACAAGCCGAGCTTGATTTAGC 54731 31 100.0 35 ............................... GATCTAACGAACACCTGCTGTGGACAGCGCTCCCT 54665 31 100.0 34 ............................... AACGACACGTTCGGCATGGCACCATCCGCCGTGT 54600 31 100.0 34 ............................... CCACGCCGGCATCGCCCATCACGTCCAGGATGGT 54535 31 96.8 37 ......................A........ AACATGAACCTGCTGCTTTACGTTTTGCCCCGACGCG 54467 31 67.7 35 ....TAT.....AA...AT.C..G....T.. TCAGCCAAGCGAAGTGATGCACACGAATTTGGTAA 54401 31 83.9 35 ....T.T..G..T.................T GGCCCGCCTGGCATATGCGACGCCTGGGACTGCCC 54335 31 77.4 0 A.A..........T....TT...G......T | G [54307] ========== ====== ====== ====== =============================== ===================================== ================== 81 31 99.1 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GAAATGACACGGCTCAAGTCCCATGATGATTCTGGTCAGCTACGACGTCAGCACCAGCTCTCCCGGCGGGGAGAAACGCCTGCGCAAGGTCGCCAAAGCCTGCCGCGACCGTGGGCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAACTCTGCGACCTGATCGACCCGGCCCTAGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGGCCCGCGTGGAGCACGTTGGCGCCAAACCCAGCCTGGACCTCAAAGGCCCACTGATTTTCTGACGCGAACCCCAAGCGTCCCATAAAAACCGGGCAGGTTCGCACCTTCCTCAAGCAACTGATTTGCAAGAAAAAAATAAATACCTAGCGGATTCACAGGTCCGCATGACTACTTCTCGACCGCTTTTTCAGCAAGTCCGCGCAACGGCCCGTGTTTTAGCAACGATGGCAAGCACTTATGCTAAGGGGG # Right flank : GCATCATGAGGCATACCTTTTTCTGGCAGGCCTGCCGCCCACTGACGCGGCACAGGTTGGACCATGCTGGAGTTCTGCGTGTGGTGCGGGTCATCACGCACGGGGTTAAAAATTTGGACGCCGTCCATCAATGCTTGGATACCATTTATTTGACGATGATGGTCTGCGGCGTACCTGCTGGCTTGCCGTCGACCATGACCTGTGCAGTGTAAGTGCCGGCCCGCCAGCCGTCGGGCTTGCTGAAGCTCATGTTGGTGGTCTCTGCGCCGCTGGTGGTCAGCGTGGCGCTCTGCTCGCCGGCCACATGCCCATCCTGATAGGTGAGCTTAGCCGAGACCGGCACATTGCTCGCACTGCCCTCGGTCTTGACCGACACGATGATGGTGTCCTTCGTGCCGATGGTGGCGGACGGGGTCACCGTCTTGTCGGCGGCGGCCTTGGTACCGACGGCAACGCTGGATACGGTCACGGCAGACCCGGTCGCAGTACTCTGTCCGGTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //