Array 1 1411688-1410859 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025930.1 Porphyromonas gingivalis ATCC 33277 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1411687 36 100.0 30 .................................... TTTAGAGTGGTTTCTAATGCTTCTAGTTTT 1411621 36 100.0 30 .................................... AATTGTTCCATTATATCGTGCTTATTTGAA 1411555 36 100.0 30 .................................... TTTAGAGTGGTTTCTAATGCTTCTAGTTTT 1411489 36 100.0 30 .................................... TACCGAAGCCACTGACCCAACTACATTATT 1411423 36 100.0 30 .................................... TTGTCATAATATTTGTTGTTTGTATTGTTT 1411357 36 100.0 32 .................................... ACTTTCTATCTTCATTAAAGAATGCTACACCT 1411289 36 100.0 30 .................................... TCTTCGTTTTTGCCGCACGGGCGTTTCTTT 1411223 36 100.0 30 .................................... ATGATTCGCTATTTTGTCCCCGTTGCGGGA 1411157 36 100.0 29 .................................... CATGCTGTATTTTTATTATCATACTGAAA 1411092 36 100.0 30 .................................... GGAGATGGCGTAGAGGCACAAAGAGCCTAC 1411026 36 100.0 30 .................................... TTCATCAAGAATTTGTTTTGTTAGAGTTCG 1410960 36 100.0 30 .................................... TTAGTAGCAATAACGAAGAAGTGTCTTAGC 1410894 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 13 36 100.0 30 GTTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC # Left flank : CAAAGCTACGTTGGATGAAGTCAAGACTTTGTTGGGCGAATATGATCGCTGCCGCATCAAAATCTTCGATTGGGCATTTGCACTCGAAGGAGCCATCATGTCTGATCGCGACTTGAAGCCGTATTTGCACGAGTCGTCGAGCAGGGAGGGTAAGAGCGGAGAGCATTCTACACTGGTGAAGATGCTGGTGGAGAAGAAAGGCTGTCTGACTCCTGACGAAAGCCAATACCTGATTCTGATTCGCAACAAGGCTGCTCACAACCAATTTCCCTGCGCTGCAGAAATGCCTCTTATTTACCGAGATGTGAGTGCAAAGGTCGGTAGCATTGAGGGATCTTCTGCCAAAGATCTGCCGGAAGGTAGTTCTCTGGTAGATTCATTATGGAAAAAATACGAAATGATAATTCGGAAAATTCTTCCGATTCTCGACCCTGAAAATAGATTTTTTGGAAAGCTTTTGAATAATATGTCTCAACCTATCAATGACTTATAAAGGGTCG # Right flank : TATTATTCCGAAAGGAGAAAGAGGGGAAGTTGTGCTGTTGATGGGGAAGTATTTCTAAATTAGCGATCGCTAAAGTGATGGAAAATGGATAGGGGGATCGTGTTCGGAGGAGAGGGTTGTAGCCGACAGTGTTTGTGTGCAGCTATCCATTCGATCGGGAGGCCTTTCGTTCTCTTCCTTGGCTTTTGTCCGTAAATACCGATTCTTTTAACTCATATAATTGTTTGTTCCTATCAAACGCTCTCATCTCCTTATCAGTGCTGCTTCATCGGGTGGTGGAAAGACTACTTTCACGCTCGGATTGCTACGATTGCTTCGAAGACGCGGTCTCAAAGTGCAGCCTTTCAAATGCGGTCCCGACTATATCGATCCTAAGTATCACCGCCTTGCATGCGGAACGGAAACGGTGAATCTGGATGCTTTCATGATGAGCCGGGAGCATATCGCCGGACTCTATGATCGCTATGGCTGCGAAGCCGATGTTTCCATCGTAGAGGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1839116-1839415 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025930.1 Porphyromonas gingivalis ATCC 33277 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1839116 36 100.0 30 .................................... CGTTACTTCGATGAAGACTACAACGAAACA 1839182 36 100.0 30 .................................... TAATAAGGTAAAATATAGTAATCCTTTGCC 1839248 36 100.0 30 .................................... GTAAAGAAGAAAAAAGATTAATTCCACTTG 1839314 36 100.0 30 .................................... CTACTCGTGCTACACGAGTTAGTAAATGGA 1839380 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC # Left flank : TATATCGTTTTCATTTTGTATATAAATCATTTTTAATTTATATATAAATCGATTGGGATAAATATATAGATTGTAAGCCCGATTTGATATAAATCGGGCAGCTCAAAAGGCCTTTAGGGGAGGTAAATAAAGAGGCACCCACCGAGTTCCTGCAGGAACTCGGTGGGTGCCTCATCTATTTCGAAGGGGTACGAAACGGCTCTCAAGCTCTACCGCTCATACAGCAGGCTTGTATCAGCCATACGCGCCGGCATATAACCACACAGGCCGAACGAAACCGGCCGAATAAGAATGCAGGGAAGAGAGGGATCGGAGCACATATCTATCATTCATTTAGTCGTTTACAAAGTCATTCCATAGAAAGGGAAAGCACTCCCCGGTACAAATTCACCGAAGAGGGGAGCAGCTTGTCCACCTGCAAATGTAGCGAAAAAGCCCAACGAGGAAGAATCCCCACACTACTGCACATTCCAACGTCCAAGCCACCAATCAAGAATCAT # Right flank : CCTACCCCCATCGAATTTGAAACCGATTGAGAAGTCATCATTCCACAGAAAGTGAGTGACGGTAAGGCTTTGGAGCCACTGCAAGCCGGCGAAAAACAGTCTGTCATCATCATTTTAGTGGGATATTAGGATTGAAAAAATGACTCTCTACGGTCGGGTTTATGCTATTTTCTCTCAAAAAATCATTCCTATGCTCCTGGCGGTTCGCACTCAAAAGTTCAACGTTCGCTTCTTCAGTGCGATGGCTTCTCTAACGGTTTGGGTAAGCTCCTGATGAATGCTGATCATCCGTTCGGCCGTTTCGGGCTTGTTTATCACAACCCTCTCATCCGAGTTCTGCCTCTCCGAAAGCAAAAGGCCGTAAACGATACTTCTATACTCAAAGATACGGGAAATAATCTCTTTAGACAAGAAAATACCGTTCCCATTCTTATAAAATTCGTCCGTCAGTTCGGACAGGAATCCACGGATGCAGGCCGGCCTGAAATAATAGGTTTTCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 2206472-2214351 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025930.1 Porphyromonas gingivalis ATCC 33277 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2206472 30 100.0 36 .............................. AAACGAAATGAAAAAGACAACAAACAGAAGACCCTC 2206538 30 100.0 36 .............................. GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA 2206604 30 100.0 36 .............................. GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA 2206670 30 100.0 36 .............................. TCCGCGCCGCGAGGTGGAGACCCTGCCGGAGGCGAA 2206736 30 100.0 37 .............................. CCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGT 2206803 30 100.0 36 .............................. CGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGAT 2206869 30 100.0 36 .............................. AGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAAT 2206935 30 100.0 36 .............................. CGAAAATAACAAAAATAGATATATTTATAAAAAAGA 2207001 30 100.0 34 .............................. ACTCTTATCATCTACTATCTCAAAAGCTCTTTTT 2207065 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2207133 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2207199 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2207267 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2207335 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2207401 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2207469 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2207537 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2207603 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2207671 30 100.0 36 .............................. ATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCA 2207737 30 100.0 34 .............................. TGCATCAAGTCACGAACTTTCTGCGAGATGGAAA 2207801 30 100.0 36 .............................. CCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCT 2207867 30 100.0 35 .............................. CTCCTTCACTTTGTCGACAATGTGCACTGTATTTG 2207932 30 100.0 36 .............................. AGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCA 2207998 30 100.0 36 .............................. CGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTT 2208064 30 100.0 37 .............................. GTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGG 2208131 30 100.0 37 .............................. AAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTA 2208198 30 100.0 36 .............................. ATTTACCTGCAGACTTGTGCCCACCCACTTGATAGA 2208264 30 100.0 36 .............................. TGGTCACGGAGCGATACCATGAGTGTTTAGTAGATG 2208330 30 100.0 36 .............................. CGGAGGAGATCAGCTATGCGGATGATACCACCCGTG 2208396 30 100.0 36 .............................. TCAGAAAACTCGCGTCCATCTGATAGATGTACACGA 2208462 30 100.0 36 .............................. TAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTA 2208528 30 100.0 37 .............................. CCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCT 2208595 30 100.0 35 .............................. AGGTGCTATCGCAGGACTGCAGGACATCCTCAATC 2208660 30 100.0 36 .............................. AGCCGCTCGACTTGACGCCATGCAAAAACAGATAGA 2208726 30 100.0 36 .............................. TCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGC 2208792 30 100.0 35 .............................. ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA 2208857 30 100.0 35 .............................. TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG 2208922 30 100.0 37 .............................. GGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCA 2208989 30 100.0 36 .............................. TTTATTGACGCCACCCCGCCGACGAAAAAAAATCAT 2209055 30 100.0 36 .............................. TTTCGGTCTTTACGTTTGTCGCCACGGATACATGCT 2209121 30 100.0 37 .............................. ATTGTAAATAAATTACATGGCTATTGAAAAACAAATT 2209188 30 100.0 36 .............................. GATTGTACGACTTTGCTATAAAGTCTGAGTTATTAA 2209254 30 100.0 36 .............................. TATCAACAATCACCGTCATATGTGTAATATACTTGA 2209320 30 100.0 36 .............................. GGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCAT 2209386 30 100.0 36 .............................. TGAGGAATCATATCAGTGTTTATTTTTTCATCGATT 2209452 30 100.0 36 .............................. TGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAG 2209518 30 100.0 36 .............................. CATGACAAAGAGACGGTTATCGGTAGAGGACAGGCA 2209584 30 100.0 35 .............................. CGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCC 2209649 30 100.0 34 .............................. TGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGC 2209713 30 100.0 37 .............................. ATTTTCAATCATGATATTTTATTTTTCCTGCAAACGC 2209780 30 100.0 36 .............................. TCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAA 2209846 30 100.0 36 .............................. TCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGT 2209912 30 100.0 36 .............................. AAGGATGATTTGGAAAATTTAGTAAGATAGTTGATA 2209978 30 100.0 37 .............................. TTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCG 2210045 30 100.0 36 .............................. GGAAATATAGTTATTGTATCTACTAAAAGACATAGT 2210111 30 100.0 34 .............................. ACCCCATCTTGCAGAGTATATGCGAGCAAAATTT 2210175 30 100.0 34 .............................. TAGTTAGCACAGTTGCTACTATCGTAGTAGCTGT 2210239 30 100.0 35 .............................. AGATAAACTTTCTTCTCGAATTAAGAAAATCGAGA 2210304 30 100.0 36 .............................. CCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCG 2210370 30 100.0 37 .............................. TATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTG 2210437 30 100.0 37 .............................. CAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGA 2210504 30 100.0 37 .............................. AGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTT 2210571 30 100.0 36 .............................. CAGAATTTGCACGAACAGTATGATGTTCGTGTTCTT 2210637 30 100.0 36 .............................. AAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGC 2210703 30 100.0 36 .............................. AAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCA 2210769 30 100.0 37 .............................. TAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTAC 2210836 30 100.0 37 .............................. AAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGT 2210903 30 100.0 36 .............................. AGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTT 2210969 30 100.0 36 .............................. TCTCAATATCTTTCATAGCTACTAAAAATTTACGAA 2211035 30 100.0 35 .............................. ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA 2211100 30 100.0 35 .............................. TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG 2211165 30 100.0 36 .............................. TGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCC 2211231 30 100.0 36 .............................. GATTACATAATGATAGACGACAGAGATTGTGCAGAA 2211297 30 100.0 35 .............................. GTACTGATAATTACGCTGCAAGGTCAGACGGTGAT 2211362 30 100.0 36 .............................. TTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCT 2211428 30 100.0 36 .............................. ACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTC 2211494 30 100.0 36 .............................. TGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCC 2211560 30 100.0 36 .............................. TATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGC 2211626 30 100.0 36 .............................. GCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCC 2211692 30 100.0 36 .............................. AGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTAT 2211758 30 100.0 34 .............................. AGAATACTTTGAAGTTGTATTCAATTACTTTGAA 2211822 30 100.0 36 .............................. CCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATG 2211888 30 100.0 36 .............................. TGAAAGCCCGAAGATAATCTACACGCAAGATTGTTA 2211954 30 100.0 35 .............................. CGTCATCAGGTGGATATTCTTACTGCTATCCACGA 2212019 30 100.0 36 .............................. TCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCG 2212085 30 100.0 36 .............................. GCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGA 2212151 30 100.0 36 .............................. AACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTT 2212217 30 100.0 36 .............................. GCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGA 2212283 30 96.7 36 .........T.................... AATCCATGTTCATGAGGAGAGGATACGAGTTCTATT 2212349 30 100.0 35 .............................. CCTTTTGCTATTGCAGCAAACATATACAATAATAA 2212414 30 100.0 36 .............................. ACTTCATGGATTTAGCGAGATACTCATTATAATTAA 2212480 30 100.0 36 .............................. TCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA 2212546 30 100.0 37 .............................. ATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA 2212613 30 100.0 36 .............................. GCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTA 2212679 30 100.0 37 .............................. TACTATGGTGTCTGCATTTGAGATACGCAAATAGCAA 2212746 30 100.0 36 .............................. CCTCAATATCTTTCATTGCGACGAGAAATTTGCGAA 2212812 30 100.0 36 .............................. AATCTATGATGATATAGAAGAAGACGACTTGTTGTT 2212878 30 100.0 36 .............................. ATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATA 2212944 30 100.0 35 .............................. CTCAATATCTTTCATTGCGACGAGGAACTTGCGAA 2213009 30 100.0 36 .............................. CCCCGTGGTAACTCATACCACCGACTATTCCACCGT 2213075 30 100.0 36 .............................. TTTGAGTAATCATCGAATAATTATCGATTAATCATT 2213141 30 100.0 36 .............................. TTATATGCATCATATTCTTAAAGTATTTTATTTGAA 2213207 30 100.0 36 .............................. GACGAATACGGCGTTCATCATCGATAGTCGCGATGC 2213273 30 100.0 36 .............................. CGGGCGGCCAACCGGTCACAACAAGAATAGACCGAT 2213339 30 100.0 35 .............................. TTCCTTCCAGTCGCAGCTTAAGATACTGCGACTAC 2213404 30 100.0 36 .............................. AATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTT 2213470 30 100.0 35 .............................. GATACGAGCACCAAGGCTGCGATACCGATTGCGTA 2213535 30 100.0 36 .............................. CCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGG 2213601 30 100.0 35 .............................. GCAGGTTGATTATAATGTTGAAGATGCTTTAAGGG 2213666 30 100.0 36 .............................. CTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCT 2213732 30 100.0 37 .............................. AATATGAGATCGGAAACAATTATAGTTGCGTCGATAT 2213799 30 100.0 37 .............................. TCACAATAACCGACAAAATGTCTCGCGTAACGTACAA 2213866 30 100.0 35 .............................. GTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTA 2213931 30 100.0 35 .............................. GATGGTGTCGACATCATACGACAATAGATCGTCGA 2213996 30 100.0 35 .............................. GATGGTGTCGACATCATACGACAATAGATCGTCGA 2214061 30 100.0 36 .............................. AATATTTTTTCAAAAATTGTAAAACTTATTAAGTCA 2214127 30 100.0 36 .............................. AAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTC 2214193 30 100.0 35 .............................. ATAATATTACATAATGGCACACTGATGGTAAACTT 2214258 30 100.0 34 .............................. CATGATGTACAAATATATCATGATCGTATACTAC 2214322 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 120 30 100.0 36 GTTTTAATTCCTGTATGGTGCAATTGAAAT # Left flank : TAGTTTGTCCATGAGCCCCAACTCTGTCAGTGCCGAACGAAATCGACTGATGGTGCTGTGGTCGGGAGATACCTCTTCCATCTTCAGCCCCAAGAATCGGGAAAAGGTGATTGAATCATTGATGCGCTCCTCCAAAGCACAATCACTGAGGTTGTACCATGTCTCCAAAAGCAACATCTTGAATAAGAGAATCACGTCATAAGCCGGGGCGCCGATGGCATTTTGTCGCTTCGTGTATTTCTTGTTGATCAGCGTCCTGATCGGACGCCAATCGATAAGCGTGTCAACCTGATTGAGGAAGTCGTTTTGTGCTTTGCGATAACGCTTTGAAAGGAGTGCGTCTGCAAATGTTACATGCTCATCGGTATTCTTGGATTGGTATGCCATGGGAGGAATATTATGCTGTTTTTAATACTCAAATATACAAAACAACTCCCTATTATACAATGAATTAACAAACAAAATACACACCAATCGCCGTGCAAAGGTCTCCATATATC # Right flank : TCCGTTACAAATATAGGCTTTTCTGTTTGAATGTGAGGAGTTTACGAGAAGGTGAAACCCAAAATTCAGACATTCATAGTTGTCGATGTCTGATTCTATGAAAAACCAAGGGGTGTGACGACTGATATATTTTATTGATTATCAATCATTTCAAAGATCGCCGGAGGTTAATCATAACAAAAGGCTTGATGAATTTGCTCGAATCGACGCTTCAAAAGATAGATAGCGGGAGCTGTATCGTGCTGTATTATAGAAATATATCCGTTGCAGAACGCTCTTTGCCAATTATTTCTTTTTCCAACCAACGTTCTTGTCTGGAAGAAAATATGATCAGACTATCTTCTTCTTTTTCCATAATTCTGGCTGCTCTACTCTTCAGCTCTAAGAGCTTGACTTCCGATATTTCCCCCTCGAACACAGAGTTCTGAATCCAATTCAGATATTTTCTGCACAGTTTTAGCATTTTGCCAACACGCTTTTCCCCGATATCGTACACTAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTCCTGTATGGTGCAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //