Array 1 490018-490910 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP018186.1 Streptococcus salivarius strain ICDC1 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    490018	    36	 100.0	    30	....................................	ACCAGCGGTAGTGATCTTAGCTTGTTCCGC	
    490084	    36	 100.0	    29	....................................	GCCGTAGATGGCACGTTCGATGGTCAACG 	
    490149	    36	 100.0	    30	....................................	ATGGTGGCAGTTTACTTCTACTGGTACTGC	
    490215	    36	 100.0	    30	....................................	ATTATCCTAGCCTTTTTGTGTATTTGAAAA	
    490281	    36	 100.0	    30	....................................	AGTATTTGGTGGATATGCACTTACAGGAGC	
    490347	    36	 100.0	    30	....................................	AGCTATGTTAGTAAGTCTTTACGGTAAGTT	
    490413	    36	 100.0	    30	....................................	TGCACCAAGCATTGATAAACCAGAATGGTC	
    490479	    36	 100.0	    30	....................................	TAACTGTCTTGTGGTAGCGGATATTGTTTT	
    490545	    36	 100.0	    30	....................................	AAAATGGCAACGTGACTTACGGGCGTGGCA	
    490611	    36	 100.0	    30	....................................	CCTCTGTAAGAGGTTTACCGTCGAACATCA	
    490677	    36	 100.0	    30	....................................	TATTAAACGCTTCAATCGTCGAGGAGCTGA	
    490743	    36	 100.0	    30	....................................	GTGAAGTTGACCCAAAAGACTAAAGTCTAA	
    490809	    36	 100.0	    30	....................................	TGAACTAATTAAGACGATTGGAGAACACAA	
    490875	    36	  80.6	     0	............CC...............T..CTCT	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	  98.6	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCTCTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGAAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG
# Right flank :  TCTCTTTGTAATAATTTTTGGTTGACTTATCCTCAAACACATCCTATCATAGAGGAGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGTCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCTATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAGGGTATGGAGATAAGCCTTTACCAGAGCCGACTGCGGTAAGCAGTATTCCTAATGAGGAAGAACTCGTTGTTTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCTACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGTTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATCCCAATAAAGGATGCTGTTC

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//