Array 1 1263175-1259846 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT629759.1 Parafannyhessea umbonata strain DSM 22620 chromosome I Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1263174 29 100.0 32 ............................. GACCAGCGCATACGGCAGCGGCGGCGGGGTGG 1263113 29 100.0 32 ............................. TCTGCGGCGGTCTGGGTGCTCAGGATGCTCTG 1263052 29 96.6 32 ............................T GAAGAGGGGCAATCCGACGAAGGAGCACATGA 1262991 29 100.0 32 ............................. AGCGCTGGGGCTTATCCCGCACTCTTTCGCCA 1262930 29 100.0 32 ............................. TGCTTTATCTGGTCAAGCTCTGCGTCCGTGTA 1262869 29 100.0 32 ............................. GTGAGGTCCGACTTTTTCATGACGTCTCCAAT 1262808 29 100.0 32 ............................. ACTACGGGCGGCATCACCGACACCGGCTCTGG 1262747 29 100.0 32 ............................. GAGCAAGGAGCTGTCCGTCCAGATGACGCACT 1262686 29 100.0 32 ............................. GGGCTTATGTGGCCTCATGACGCCGGGGCGGA 1262625 29 100.0 32 ............................. AACCGCCTGCGCGACACCACGAGCGCGGCTGC 1262564 29 100.0 32 ............................. GATGCGCTCGCCCGCCCAGTCACACGTCCGCA 1262503 29 100.0 32 ............................. AGTTTTTCATGGGCCACGACATGGGCCACCGA 1262442 29 100.0 32 ............................. GCACAGCGGGCGGGCTCGCAGTTCCTGAACAA 1262381 29 100.0 32 ............................. TAGACAAGGTTCTGGGACTTGGGAAATACGCG 1262320 29 100.0 32 ............................. TAAGAAGATGAACGAAACCGTTGTAGAGTCCA 1262259 29 96.6 32 ............................G GACGCCACGCCAGGCGTGTGCCGTGCTGGCGC 1262198 29 100.0 32 ............................. GTGAGGTCGTGCCAATCTACCCCGGTGTCGGT 1262137 29 96.6 32 ............................A CACATTCACACACGTCGTATATGACATGGTGA 1262076 29 100.0 34 ............................. ATGAATCCGTTCGAACCCCATTGGTCGCGCATGA 1262013 29 100.0 32 ............................. CTCGGGGATGAGCTTCTGGCGCTCGAACTCTG 1261952 29 100.0 32 ............................. ACGATTCGCCACATCACCAAGCGCGCCGTGGC 1261891 29 100.0 32 ............................. ATCGTGAGCTTCGTCCAGAACCTTCCGTACAA 1261830 29 100.0 32 ............................. GACTACATGCAACAGGTCACCAGCTTCAGCTC 1261769 29 100.0 32 ............................. TCGAGCGCGCCGTCGTGCCAGCCACTCGGCTC 1261708 29 100.0 33 ............................. CTCGGCAGGTCGTCCATCTCCGCCGAGGTGTCC 1261646 29 100.0 32 ............................. TTCAACGAGGCCCTCTCCGACGGGCAGGTCAG 1261585 29 100.0 32 ............................. TTCATGGTAGACTCGAACTTTTTAAGCGAGTC 1261524 29 100.0 32 ............................. GACGGCACGATCACCGACTCGGTCGGCGTCTA 1261463 29 100.0 32 ............................. GTTGAGTTTACAACTACGGAGCTTGAGGGCAC 1261402 29 96.6 32 .............A............... AAGGTAAAGTTTGGGGAGCCTTCGCAGGAGGA 1261341 29 93.1 32 .............A..............T GCGTCGTGCTTGTGCGCCCTCGCCTTGTCGTA 1261280 29 96.6 32 .............A............... GGCATTTCCGATGCGGTTTCGAAGGTCGTTCC 1261219 29 96.6 32 .............A............... TCGTTGAACACCGCGTTCGAAAGCGAGACGTT 1261158 29 96.6 32 .............A............... GTCATTTGGCAAGAACTATATCAGTCTCAAGA 1261097 29 96.6 32 .............A............... GCCGTGCAGCTCTCGTCCCCAGTCGGGCTAGT 1261036 29 93.1 32 .............A..............T CGGTGGTGACATCGTGCGTGGCATCTGGCAAG 1260975 29 96.6 32 .............A............... GGCGTGACGGTGAGGTACCGCAAGGACATACA 1260914 29 96.6 32 .............A............... TCAAGAAGGAACTGGAGCGCCAGAAGGTCGTG 1260853 29 96.6 32 .............A............... GATTTACGAGCTAACGGTCATCGGCATCTAGC 1260792 29 96.6 32 .............A............... GCCGTAATCGGCGGCGATATGGGCGGATTTGG 1260731 29 93.1 32 .............A..............G GCGTCTAAGGCGTTCGACCACTCGTAAAGGCA 1260670 29 93.1 32 .............A.............A. CAGTGGTCCGTCGCCTTCGGGTTGCGGTCCGT 1260609 29 96.6 32 .............A............... CATTCCTCTTCACTCTCGGCCTTCGCGTCGAT 1260548 29 96.6 32 .............A............... TCCACGGACTGGCAGCTCACCCACCTGCTGGA 1260487 29 93.1 32 .............A..............T CGTACACGCCAAAGGTAGAGCGCGTGGCGCAA 1260426 29 96.6 33 .............A............... GCCGTCGCTGGCGGCAACGCCGACACCTTCCAA 1260364 29 96.6 32 .............A............... GACGCCGTGGAGCTACTCACGGATGAGGGCAT 1260303 29 93.1 32 .............A..............T TCGCCCTTCTTCTTGTCGCCGGCCTTGATGCT 1260242 29 96.6 33 .............A............... GCATTGGATGTGTCCAAGGCCATCGCGTCGCTC 1260180 29 93.1 32 .............A..............T ACCATCGGCAGCGTCACGTGCGGCGTCTCGTC 1260119 29 96.6 32 .............A............... GGGGCTGTCACCGCCACGGGGCTCAAGCTCCC 1260058 29 96.6 32 .............A............... CGCTGTATCGCGCCTGACGTCCCGCGGGCGAT 1259997 29 100.0 32 ............................. TACACGATGCTCGACAACCTGAAGCTGGGCTA 1259936 29 89.7 32 .......T...T.A............... GACAACACCGCCGTCGCTATGGTGGCGGCAGA 1259875 29 82.8 0 .............A........C.G.T.T | G [1259853] ========== ====== ====== ====== ============================= ================================== ================== 55 29 97.4 32 GTGCTCCCCGCATGCGCGGGGATGATCCC # Left flank : CTGACAGTGGTCGTGGTTGTGTTGACATCCTGCCCAGTGGGACTGCGCGGCGACCTGACGATGTGGCTGCTGGAGATATCTCCGGGGGTGTTTGTGGGGCACGTCTCTGCGAGGGTTCGAGATGGATTGTGGGACAGAATCCTGCAATCGGTCCGCAACGGTAGGGCGATTATGGCGTACTCGGCCGACAATGAGCAGCATCTGGCGTTCAGGACCTTTCAGCCCGACTGGGAGCCCGTCGACTGCGATGGCGTGGAGTTGATCAAGAGGCCAAACGGAACGGAGGACGCGAAGTTCCTTGGCACTGCGCCGACAGGTTGGAGCAACGCTAGCAAGTTTAGGGCTGCCAGGAAGTATGGCAGGTAGCCAGGATGCGGGTGGCTCTTTGCCTGCAACACGTAGCTACAGATATGAAATGTTGTAGCAACTACTGGTTGGCCGAACCTTGACAACCGTATACGAATTGGGCTTTACTATCGCTGCGATGCACTTCGTGAAGT # Right flank : TTTAGGGAAATGTGGCGCACATCAGTTGCCCCGAAGGGACCTCCCGTTCGTGGGAAGCTCCTTCGGAGTTTTTCGTTCCGGATGAGCGGGAATAACGTACGCGGTTCTTCTCGCCCGTGGGCTAGATGTCGTTTACCTCGAGGCGCACGGCGTCTGGTCGGGCGTAGTGGCCGATGGGGTCGAACTCCCACTTGCTTGCAGCTACCTGCTGCATGTCGAGCGTGGCGTACAGGATGCCGTCGGTATCCCACAGGGGCTCCGCGCCGGGAACGTAGTGGCCGGCGGGGTCGACCACGCAGCTGCCGCCGCGGTAGACGACCTCTGGCAGACGGCTGACCTCGTCCGTTGAGCGGAGGTCCGCCGGGTAGTCCTCGCGCACGATGTAGGGCGCACAGTTTACCACGTAGCAGCGGCCCTCGATTGCGATGTGCTGCACCGTGGCCTGCCACTCGGGATTGCAGTTGGTATTGGGCGCGAGGTAGATGCTGACGCCCTTCTGG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.71, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATGCGCGGGGATGATCCC # Alternate repeat : GTGCTCCCCGCATACGCGGGGATGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //