Array 1 84576-86464 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPCY01000009.1 Veillonella sp. S13054-11 Contig_9_len_227507, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 84576 35 77.1 41 AGAA...G....G.A.......T............ GTATTGGAGAATATACTTATAGAGTACAAATCACATGAATT G [84588] 84653 35 91.4 44 ...CT.........C.................... TGGGCAAGATTCATCGAATACAACCGTCAGGACGTGGTAGTAGA 84732 35 85.7 44 ............TAAT......T............ AAATCTGCTACTAAAGAAGCATTAGCTTATGAAGGCGATTTCAT 84811 35 88.6 43 ............TAAT................... TATATCACAGAAAGGACGTCATATGGAATTCTTATTAGTTACT 84889 35 94.3 43 ..............C.......T............ CAAAGGAAAACCCCGAGACCTATCGGATAGTAAATAACTACAA 84967 35 85.7 42 ............TAAT......T............ AAGATGCCGGAGACCGCATTTAATGAAATGGATAACAAAGGG 85044 35 97.1 43 ..............C.................... TAAATGTTATGAAAAAGTTTATTAATCAAAAGTTCAATAACTC 85122 35 94.3 43 .......C......C.................... TTGTATAAAGTTACAAGAATTTCAGATATAACTCCGTGATTTT 85200 35 100.0 43 ................................... AATGCAACTCTTTCAATGCATTAGTTAACTCAAGCGTGTAATA 85278 35 100.0 41 ................................... AGGTTATTGCGGTCGTAACGATGATTCCTGCCCTGCTGTAC 85354 35 100.0 44 ................................... ATGGCTGTAACTAAGAAATCTATTGAAATCAACAAAACTCAAAA 85433 35 100.0 42 ................................... CATCTGGAAAAGGATTAGCATTAGAGGTGAAGAAAAGATACC 85510 35 100.0 42 ................................... AATTATGCTGGAATACCAATATTTTAAACGTGGGGTTTTAGG 85587 35 100.0 40 ................................... CAACAGGCTAACATACGGTGAATAAAATGGCTGTAACTAA 85662 35 100.0 43 ................................... ACGACAAAGATGGGGAACAAATTATACCACTTGCAAGCCATGT 85740 35 100.0 42 ................................... TAAACGGAGGGCACAAGAACACCAAGAGTTATTACAGGGGGC 85817 35 100.0 43 ................................... GTTATTTTCTTATGGGTATGTTAGTATATCACACAGTAAAACG 85895 35 100.0 42 ................................... GCTTAATCGTAGTGGTAATACATATGAAGAACCTACGATGAA 85972 35 100.0 43 ................................... ATTTGCACAGTACTAATATCCATACTGTACTCCTTTCTTAAAT 86050 35 100.0 37 ................................... AAAAACTTATTTACACTCGATGAAAAATCTATGATTT 86122 35 100.0 45 ................................... ACGTGAAAGGCTTTAAATATTTAGTAGCCAACGATACGAAAGGGA 86202 35 100.0 43 ................................... TTAAAAGGTATGCTAATCCTATAACATCGTGTTTTTGTAAATT 86280 35 100.0 39 ................................... GAATTGCTAAAAGAGCAAAATAAAATGCTTATGGCTTTA 86354 35 100.0 41 ................................... CTGGAAATCCCTCTGCATCAGAAAGATGCACGTAATCTAAG 86430 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 25 35 96.6 42 GTTTCCGTCCCCATTAGGGGATCATTTAATTTAAC # Left flank : TGAAGCGCTAACTCTTTATCAAACTTCTGTGTAGAGGTATTTTCACCTTCCTCAAGATCTCGACGATCTACAGCTGCAGCAATATTATCCGCTTCGTACACAATGTATGCATAATCATCATTTTTTAGTTGAGCTGCACTAAGCTCTTTCCCGTGATGATACTTCAAACAATGAGTAATACTTTGCTTTAAGCCCATATCGGAAAAATAGGGCTCAATGAAAGCAGCGCCGCGCTTAGAATGTGCATCGGTTCCCTGATTAGCTCGATACACGACTTTGCCGATATCATGAAGCAATGCACCCTTTACCAGTGCATCCCATTTACCCATCACATCGCCTCCAAACTCTACTTAAGAAATAAAAAACCTATTGACTTCATTATATATTCATTTCTGATTAAAACCAATAGAAAAACCATCCGATTTATACAAAAAAGCCAGTATATTCACTAAAAAGAATATACTGGCTATATTTTTGTACTTATATGAGTTTTTGACATA # Right flank : CCCTGTCTTTGAAACAACAGATATTTACTGGTTCTAAAATACCAAAAACGGCGGAGATTGTAACTCCACCCCAGAAGGCACTTTAATGAGCTAAAATAATGTCGTTTAACCGCGCCACTATCACAACGGCGCAGATTTGATTTTCAAAAGATTAAATCTAGGTCTATTATAGCACATCAATAGCATTAATGAAAAACATATGAAAATAGAGCCACCTTATATAAGGTGGCTCTATTGAGGTGCCATATGTAACTTATTTTCAATAATTCATCTGCTCCCGCAGTTCTATTTATTTTCTTATACGCCTATCCTCCTTTTCCAGATTTCTCTCCACCCTCCTATTTCTACTTTCACCGTCCAACGAGTTATCTCGTTAGGTCTCTCCAGGCGATAAATAGTTCGGCCACGACTTGAGGGTTTTGGCTGAGTTTGATGCGAGCTAGCATTTTTCTCACGTAGTTGCAGTGTTCTAGCATCGCTTCGTTCAGTTTGTGTTTGAC # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGTCCCCATTAGGGGATCATTTAATTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [31-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //