Array 1 33067-38198 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTP010000025.1 Acinetobacter baumannii strain A18 P_contig000025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 33067 30 93.3 30 ............................GA TCGTATTGAGGATCTGGTGAATCGATTAGA 33127 30 96.7 30 .............................A CCAATATGACTACGTTTACCTACCATAAGT 33187 30 100.0 30 .............................. CATGATCATTTCAAAATCTTTTTGGTATTT 33247 30 93.3 30 ............................AG ACACAAAGTTCAAGTTTAGATTCAAACCCC 33307 30 96.7 30 .............................C TCCAGCGCGATCTGCAAAAGCCAATAAAAC 33367 30 96.7 30 ............................G. AGTCGTTAGCTGCAACAATTAGCGCCTCTT 33427 30 96.7 30 ............................G. GATGGTGAAGTTGGCACGGTTCGGTTGGCT 33487 30 96.7 30 .............................A AATAGTGACTACGTAAAAGAAAACTACCCT 33547 30 93.3 30 ............................AG AAGGCACTAGGGCGGTGACTGTTGCACCAG 33607 30 100.0 30 .............................. ACTACGCTTTTCGATAGCTTTAATTAGCAT 33667 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 33727 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 33787 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 33847 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 33907 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 33967 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 34027 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 34087 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 34147 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 34207 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 34267 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 34327 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 34387 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 34447 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 34507 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 34567 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 34627 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 34687 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 34747 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 34807 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 34867 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 34927 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 34987 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 35047 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 35107 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 35167 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 35227 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 35287 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 35347 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 35407 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 35467 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 35527 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 35587 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 35647 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 35707 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 35767 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 35827 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 35887 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 35947 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 36007 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 36067 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 36127 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 36187 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 36247 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 36307 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 36367 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 36427 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 36487 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 36547 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 36607 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 36667 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 36727 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 36787 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 36847 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 36907 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 36967 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 37027 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 37087 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 37148 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 37208 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 37268 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 37328 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 37388 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 37448 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 37508 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 37568 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 37628 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 37689 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 37749 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 37809 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 37869 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 37929 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 37989 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 38049 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 38109 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 38169 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 86 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //