Array 1 128518-128083 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACAWD010000033.1 Aggregatibacter actinomycetemcomitans strain SL7472 412, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
    128517	    33	  97.0	    34	................................G	TTAGGTGCGGTTCATATTGTCTCCGTGATGTTCT  	
    128450	    33	 100.0	    36	.................................	ACTGTGACAATATCTCAGGATATCGGAGATATAGGT	
    128381	    33	 100.0	    33	.................................	GCTTATCATCAATTTGCATACGTGCTTGCACCA   	
    128315	    33	 100.0	    34	.................................	AACATGTTTATATTTTATGTTATCTAATTGTGTT  	
    128248	    33	  97.0	    34	................................G	AATGGGTTTTGTTTCTTTTGCTGCCGGTGCCCGC  	
    128181	    33	 100.0	    33	.................................	CTACCGGCACCTGGAATTGGTTAGCCAATACCC   	
    128115	    33	  81.8	     0	.......T....G.....A.C...T......T.	|                                   	
==========	======	======	======	=================================	====================================	==================
         7	    33	  96.5	    34	GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA	                                    	       

# Left flank :   TTGATGAGGTGAAAAATGTTAATGTTGATTACCTATGATATTTCTTTAGAAGACCCGGAGGGAAAAACCAGGTTGCGCCGTATTGCGAAGCATTGTCTGGATTATGGCGTACGGGCGCAATATTCGGTGTTTGAATGCGATGTAACGCCGGATCAATGGGTAAAATTGAAGGCTAAGCTACTGGCGACTTATGATCCGGATTGTGATAGTTTGCGATTTTATCACCTAGGCAGCAAATGGAGACGCAAAGTGGAACACCACGGGGCGAAACCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGA
# Right flank :  GGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGCTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAATATATAGACTGAACCCCGTTATTAGTCGGGGTGCTTTGTGCTGAGATGATACCCGTAAACCTGATACAGTTAATACTGACGTAGGAAACTAACAGAGAATCACATTCCCTTTCTTTTTTCTCTTCTTTTATCGTCATTATTGCTGATTATCTTTTTTTCGTTAAAAAAAGGAAAAATTATGCAATATGGTTTTTGTTGTCCGTTATTTGTAAATAACGGAGGGCGTGATGAGTAAGGTTGCGCAAGCGTTGACCATCTTCGGTTCGGACAGCGGCGGCGGTGCCTGGGTTCAGGCGGATTTGAAGATGTTCCAAATGCACAGGATGTCGTTTGGTTCATCGGTGGCCGCGCAAAATACCTTGAACGTGGTTGATATTTACGCCGTG

# Questionable array : NO	 Score: 6.08
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-3.70,-4.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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