Array 1 43410-45028 **** Predicted by CRISPRDetect 2.4 *** >NZ_QDIV01000001.1 Bifidobacterium animalis subsp. lactis strain CF3_2 CF3_2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 43410 36 100.0 37 .................................... GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG 43483 36 100.0 35 .................................... AAGACCGGCACCGAACGCGACTTCACCATGACCTC 43554 36 100.0 39 .................................... GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA 43629 36 100.0 34 .................................... AAGCCGAACTCAATCACACGCATCAAAGCGAACA 43699 36 100.0 38 .................................... GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 43773 36 100.0 34 .................................... TCGCCATTGGAGACGCGACGCAGGATACTATCCG 43843 36 100.0 34 .................................... ACGACAAGCCGCCGCCACCGATATTCACCTGCGA 43913 36 100.0 38 .................................... GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 43987 36 100.0 34 .................................... AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT 44057 36 100.0 36 .................................... CACTGGTGGTGCGAATACGCCGAAACGGTGGAATGG 44129 36 100.0 35 .................................... ATTGAGATTGATACCCGTGGCGCCGCTGATGAGAC 44200 36 100.0 35 .................................... AATCCCTCGGCCCATGATTCGTCACGTGGGATCAC 44271 36 100.0 35 .................................... AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA 44342 36 100.0 36 .................................... GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT 44414 36 100.0 36 .................................... CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA 44486 36 100.0 38 .................................... CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 44560 36 100.0 39 .................................... ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG 44635 36 100.0 36 .................................... GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC 44707 36 100.0 36 .................................... GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA 44779 36 100.0 36 .................................... CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC 44851 36 100.0 35 .................................... GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC 44922 36 97.2 35 ...................................A AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC 44993 36 91.7 0 ...........T.T.....................A | ========== ====== ====== ====== ==================================== ======================================= ================== 23 36 99.5 36 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Left flank : ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : AATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //