Array 1 22-321 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANOF01000023.1 Rhodopirellula europaea SH398 cSH3980024, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	===============================	=====================================	==================
        22	    31	 100.0	    37	...............................	AAGCATTGATTTTCGATTTTGAAATTCTGTTCCTGGT	
        90	    31	 100.0	    35	...............................	TAGCACCCCGTGCCATGTGTTTCCTTGCATCGAGT  	
       156	    31	 100.0	    36	...............................	ACGCTGTAGCGTGTGTAGTCGGCTACGTCTTGAGGT 	
       223	    31	 100.0	    37	...............................	GAATGGAAGGAATGACACGAATTAGACCTGCTCCCGT	
       291	    31	  74.2	     0	.........T...........T.G.C.CCCT	|                                    	
==========	======	======	======	===============================	=====================================	==================
         5	    31	  94.8	    36	CGCGCTCCTCACGGGGCGCGTGGATTGAAAC	                                     	       

# Left flank :   ATGTCGTAAGATTCTTTCTGTC
# Right flank :  TTGGTAAGGAGGCTACTGATTTGACACGTCGTTTCCTCTTAGCCTTCGCTGTTTTGAACACTGACGTGGACGGCACCATTTTCGTTGGAGATGCACCTGATGTCGACGTTCAAAAAACGTTGCAACACGTCGATGTGGGTTTGGCTGTGCAGTGACAACGGTCCGGTGCAAAATTCGCTTCGGTGTCCGTTGCGTGCCGCCAAGCCCATTGGCAACAACAATTGATCGGCGAGGTAAACGCCCACCGGCACTTCGCTGGCCAAATGGGCTCGTGCTTCGCGCAGCGCCGCACGGGCGACCTGTTCCGCTTTGATGCCGACCTTTCCGAAGCCGATGATCAGTTCACTGACATTGTCAAACGCCAACTCGATCATCACGACGTTGCCGGGACCGCCCGCCTGCTGAACATCAACGACCTGGAACGCCTTTTTGTCCCATCCGGTTTTGCGTGCGATCACATCACACTCCCGCTGGCCGACCGATTCTGGAATCCTGGAAAC

# Questionable array : NO	 Score: 8.80
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCTCCTCACGGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.50,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [21.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//


Array 1 93416-93649 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANOF01000044.1 Rhodopirellula europaea SH398 cSH3980046, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	===============================	=====================================	==================
     93416	    31	 100.0	    36	...............................	ACGACGGCCAACGGAGCCAAAGAAAAGCCGCTCGGT 	
     93483	    31	 100.0	    37	...............................	ACGGTCGAGGCCGAGGAAACCACGCCACGCTGGCTGT	
     93551	    31	 100.0	    37	...............................	TTCGATGCCTTACCGCGGCGTTTTCGTGGACGTCGGT	
     93619	    31	 100.0	     0	...............................	|                                    	
==========	======	======	======	===============================	=====================================	==================
         4	    31	 100.0	    37	CGCGCTCCTCACGGGGCGCGTGGATTGAAAC	                                     	       

# Left flank :   TGCGTGTGACACAAAGGGGACCGCGATGGTAATGTTGGTGACGTACGACGTGAGCACAGCAAGTGCCGCGGGCAAACGGCGTTTGCGGCTGATTGCGAAAATCTGCCTGGACTACGGCCAGCGAGTCCAGAACAGCGTTTTCGAGCTGGATCTAGATCACGCCAAGTGGGTCGAATGCCGCGCCAGGCTCATTGAGGCCATGGAGCCGAACGAAGACAGCCTGCGTTTCTACCGACTCGGCAACCACTGGCGAGAACGGGTCGAACACATTGGCACCAAACCCTCGACAGACCTCAGTGGCGGCACGCTAATGGCATGATCGCGAACGTGAAGCGCGCATAAGAAACCAGCCGGGTTCGCGATCAACGCTTCTCTCGCGGTGAACCGGTGTTTGGTCACCAAACGGGCACATGACACCGTCACGTAGCATCTCTCCCCCTCGGGTTCGCGAATTGATACGATTTCAAGTAGCAATGGTCGCCTCTCGCGACCAATGCAGT
# Right flank :  C

# Questionable array : NO	 Score: 8.86
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCTCCTCACGGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.50,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.64,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//