Array 1 3634921-3637049 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016833.1 Xanthomonas fragariae isolate Fap29 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3634921 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 3634981 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 3635042 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 3635102 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 3635162 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 3635222 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 3635282 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 3635342 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 3635402 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 3635462 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 3635522 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 3635582 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 3635642 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 3635702 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 3635762 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 3635822 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 3635882 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 3635942 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 3636002 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 3636062 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 3636122 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 3636182 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 3636242 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 3636302 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 3636362 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 3636422 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 3636482 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 3636542 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 3636602 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 3636662 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 3636722 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 3636782 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 3636842 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 3636902 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 3636962 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 3637022 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AAATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //