Array 1 204574-203155 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSKN01000002.1 Bizionia gelidisalsuginis strain IC164 NODE_2_length_247985_cov_210.356, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 204573 36 100.0 30 .................................... TAACAGCGAACTCTTCAGCAAACCCGTCTG 204507 36 100.0 30 .................................... CCAATCCCATTTTTTGTGTTTGCTATTTGA 204441 36 100.0 30 .................................... TTTTTAGAGAAGTTTTCGCGTTCTTCTACT 204375 36 100.0 30 .................................... CTTTGGGCTTTCTGTTAAAATAACCGTGAG 204309 36 100.0 30 .................................... ATTAGTTTGTTCATATTTTTATACGATATA 204243 36 100.0 30 .................................... ACACGCTCTTAGATACTCTCTAACTGTTTG 204177 36 100.0 30 .................................... TTTTTTCTGGAGCTTAAGTTCGTCAAGTCT 204111 36 100.0 29 .................................... AATTATTAAACCCCACTTATTAATTTAGG 204046 36 100.0 29 .................................... GAAGAGTTAGATACACAGCCTTTGAATAT 203981 36 100.0 29 .................................... TACATTGTTATTGATGTTGTCGGTGCGTC 203916 36 100.0 30 .................................... GATTGAGGTGTTTGATATTGATAAGGTGCA 203850 36 100.0 30 .................................... TATCTAAACCATACATCTTGTATCTTTTCA 203784 36 100.0 30 .................................... AACAACCGACGGAATACGTAAGAGTCAAAG 203718 36 100.0 30 .................................... TCAGGCTCCAGATAGAGAACCTCAAGGAAG 203652 36 100.0 30 .................................... AATAGAAAAGCAGCGCCAAAGCCTTATTAA 203586 36 100.0 30 .................................... TGATTTTACTTTATCAGTATCAGGGGATTA 203520 36 100.0 30 .................................... TGAGAGTGTTTATAAGCGTCAAGGAAAAGA 203454 36 100.0 30 .................................... CTTTCTCGATAGCCATATTCTTTTCGCCTT 203388 36 100.0 30 .................................... AACAACTTTTTTAACTGTAGAAGACCACAA 203322 36 100.0 30 .................................... CACACCAACTAAATACCACCAAATGAGCCA 203256 36 100.0 30 .................................... TCTTTTACTACACACGGCACGAGTAATCCT 203190 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : ATTTATGATAAAACCCCTAAGGAATTGTATGAAATGGAGCAACAACAATTGCTGGAACATTTATTTAAAATTACACAGTTGGATGTTGAAGCTTCCTGTATTAAACTTTTGCACCATACGGAAGCTAGAGAAAAGAAGGTGATAACATCATTTATGGGTTTGAAATCTGGTATGAAAGGCGGTAAAAATATAGGTGAATATAAAAAATTTCCTTGGCTAAAAGTTGGTGTTAATAGTTTTGATTGCTTAGTGGAAGGTTATGATTTTAAAATATCGCCTGCAGGAAAACTAAGTTTTTTAAAACATTTATAAGTTACTAGAAAATGTGTCGAGTTCATTTCGTTTTTAGTTGTCTTCGATAAAGATTGGAAAATGAGGTACGAGATTCGAAGCAGGCAAAGCGAACAAATCGCCATTATTATGATTAGTATAAGCATTGTGCCTCGTGGTTTAATTAGAAAACACGATATTAACCGTAAAAGTTGTATTAGCGATTGCGG # Right flank : AGTCGGCTTGTTATCGACTTATAGTAAGCTGTTTAGGTAAGGATATTGTTTTAAAAAATGCTTCTTTTTTGTTCTGATAAGGCACTCTTGAGGCATTTTTTAGTTTTAAACAGTTTTTTAAGTGCTATTTTTTAAAAAATAGTAGTGTATAATTAAAAAGAGTTTAATTTTATTAGCCCCCTTTCAAAATAAAAGATGTCTCTTACTTTTTAAAATAACATCTTGCTTTTAGTAAATTATTTTGAGAAGATATTGAAGGTGTTTTTTCTTTTAAAGTCTATCCTATTTGTTAGTTAGTATCAAGTATTGTTCTTGGTTCTAAGAGTACAGCGGTCTCATGTCTATTATCGTTCTAGAATGAAAAAAAAATAAATCGTTAAAACAACTCCAGTTGCGTGGGTAAAGGGTCTTTAGAGACTGCAGCTTTACCCCAAAAATTCATAATGTTTCCAAACTGTTTATCTGTAATACGCAAAATACTAACCTTACCTAACGGCGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 151087-153260 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSKN01000003.1 Bizionia gelidisalsuginis strain IC164 NODE_3_length_218629_cov_215.102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 151087 46 100.0 30 .............................................. CCAAAAAATGATGACGGCAAAAAAAGTATA 151163 46 100.0 30 .............................................. AAAATCTTTAATAGCTTTCTGCGGGTCTTC 151239 46 100.0 31 .............................................. TTTAGAAAATGACATTGATTATTTACAAAAA 151316 46 100.0 30 .............................................. ATGTGTCTTCTCTATTATCTAAGATAGCAT 151392 46 100.0 30 .............................................. CCGGTGAAGCAACACTTAATTAAAAACAAA 151468 46 100.0 30 .............................................. TTACAATTGGTGCAGTAGTTCACTCAAACA 151544 46 100.0 30 .............................................. TACAAACCGTTAAACACGTCCTTAAAAATT 151620 46 100.0 30 .............................................. AACTTGTTGCATTAGACGAATCTAAAGCTT 151696 46 100.0 30 .............................................. TGTTCCAATATCTAGCGAGAAAAACTACAA 151772 46 100.0 30 .............................................. AATTTTATATAGTGTCTATTTCTACTACAC 151848 46 100.0 30 .............................................. AATATACAATTGATGGCGTTGTGGTTAAAG 151924 46 100.0 30 .............................................. AGTTGACCTGCAAATGAATTATCTATAAAA 152000 46 100.0 30 .............................................. ATGGTTTGCTGCCATAATTAAAAAGATTTA 152076 46 100.0 30 .............................................. ATACTTTATACCGGTCATTAACTGAACACG 152152 46 100.0 30 .............................................. ATAAAAATAATAGCCGTAAATAAGCACAAA 152228 46 100.0 30 .............................................. CGTCATACCGAACTCAATACCTTTAATCGT 152304 46 100.0 30 .............................................. ACGGTAAATGTTAATTCCCATCCATCGTAT 152380 46 100.0 30 .............................................. AGCGTTTAAAGTGTTGTTTTGCGCTTGAAC 152456 46 100.0 30 .............................................. AGCAATTCCGACCGCATTTTCAGCAACAAG 152532 46 100.0 30 .............................................. AGGTATCGATTGCAAAAGCTACAGTTTATT 152608 46 100.0 30 .............................................. TATATAGGTTGCCTTTAGGTTGCCAAAAAC 152684 46 100.0 30 .............................................. GTTCCTGATACCATTAATGCATTTAAAAAA 152760 46 100.0 29 .............................................. AGTCTGTAAAGTATACTCTTTAAATCTGC 152835 46 100.0 30 .............................................. AGTATTGAGGATTAAAATTCTCCTGCTTGC 152911 46 100.0 30 .............................................. CGTTCGAGGGTTTACTTGTGAACCTATATT 152987 46 100.0 30 .............................................. CGAACCTAGTATAGAGGTTATCGCACTTTA 153063 46 100.0 30 .............................................. GAGTTGGGTGGTGTCCTGTATAATCCTTTT 153139 46 100.0 30 .............................................. AAAGTGGATATGCAAGAATAATATTATTGA 153215 46 91.3 0 .....................................TC.T.A... | ========== ====== ====== ====== ============================================== =============================== ================== 29 46 99.7 30 CTTGTGATTGCTCACGTAAAAATACAATTTGAAATCAATTCACAAC # Left flank : GTATGCAGCGCCCTCTAATGGTCGCTGTAACCACTACTACTGCATCTCTATATAAATGTTATGCAGGAGAATTACGGAGTATAAAATATCCTGAATTAGATTAAAAAGATGTCTAACAATAGATTTAATGCATATAGAATTATGTGGGTATTAGTGTTTTTTGATTTACCTACCGAAACTAAAATAGAACGCAAAGCTGCTAGCGGATTTAGAAAAAATTTGATAAAAGATGGTTTTGATATGTTTCAGTTTTCAATATACTTGCGTAATTGCCCAAGTAGAGAAAATGCGAACGTACATATTAAACGTGTTAAAAATACGCTACCCAAACATGGTAAAGTTGGTATTTTATGTGTTACCGACAAACAATTTGGAAGTATGGAATTGTTTCACGGAAAAAAACAGACAGATTTGCCGAATACAACACAGCAATTAGAGCTTTTTTAATTTCAAAAAAACAATCCCCAAGCCTTTATCTATATAGAGTCTTAGGGATTGAC # Right flank : CAAATATACCTATTGTTGCCTGAACACTATATTTTGGAATGATTCAATTCTATTGTCACCCAATTTGTTACCTTTAAAAAAGAAACCCTGTAAATCATTGATTTACAGGGTTTTAAGTGGAGTCGGAGAGAATCGAACTCTCGTCCAAACAAGTCACCAAAGAGTTTTCTACACGTTTATTCTTTTCTTGAATTTTCGTTCGCAAGCTGGTTAAAGAAAACCCACTTACAACTTATCTTCTTTAGTTTCAATTATGCGACAAAGCGGCACCTAATCTATCTTGACATTTACGATGTCTCAAATGGAACGCCGTCAATCAAGGCTTTCCGGAGACATAAAGCTCGTACACCTAGTGTACCGAGGCTTAATCCTACTATAATTCGGATTAGGCAGCTAAAGCGTAGTTATTCTCGCCGTTTAAAAAGTTGACTTAGCCTTTTACGTGTTTCAAAATCATTACACGACGTGCTTACCGTTTAATTAATCTCGCTGTCAAAACC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGTGATTGCTCACGTAAAAATACAATTTGAAATCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //