Array 1 316696-320684 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025570.1 Acidipropionibacterium jensenii strain JS280 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 316696 36 100.0 36 .................................... GGTAGCCGCGAGGCCCAGAGAGCATGCCATCAAGGC 316768 36 100.0 39 .................................... TTCCTCATCCCGTCGTTCGTCGAGGTGGTGACCGCGCAC 316843 36 100.0 36 .................................... GGGTCGAGGGAGGCGCGGCATGAGCGGCGAGTTCGA 316915 36 100.0 36 .................................... AGGCCGAGCTGGTCCGCGACGTCGGAGAACTCCTTG 316987 36 100.0 35 .................................... TTCTTCGTCGGCGCATCCTCCTGCACCCATGTCGC 317058 36 100.0 36 .................................... GTGGGTCTCCTTCGCGGGATCGCCCCACGCTTTCGC 317130 36 100.0 35 .................................... TGAAGCCCCACGAGTTCGTCAGCGCGGTCCACAGG 317201 36 100.0 35 .................................... GTCTGGTCTGTGGTGTGGGGTGCGATCTCCGCGTT 317272 36 97.2 35 ..............................G..... CTGGCTAGCTGCCGTGTGCAGTTCATATGCACAAA 317343 36 100.0 36 .................................... GGGGTGCTCGGGATGCTCGGCGATAGCGGCCAGCGT 317415 36 100.0 36 .................................... CTGGGTCGACAAGGCCAACTACGGCCGCGTCAACAT 317487 36 100.0 37 .................................... TGGCGTCCTTGCCGGTCTGGGCGGTCATCCGGCCGAT 317560 36 100.0 37 .................................... CTGGTCGATGAACGGGTCGGGGGTCTGCGGATCATTG 317633 36 100.0 35 .................................... CGCGGAACCTGGAATGAGCCGTTCGCCCGCGACCT 317704 36 100.0 36 .................................... ACGGGAACTCGATCTCACTGGTGACGTCGCGCACCG 317776 36 100.0 35 .................................... CCCCCCGTGCCGCCGGCGACACGGTTCGCGATCTT 317847 36 100.0 35 .................................... TCCTCGGGGTAGGTGACGACGGGGCAGTGGTAGCG 317918 36 100.0 35 .................................... TGCTGGATGAAGTCTTCCTGCTCGGAGCGCTGCGC 317989 36 100.0 35 .................................... TCGAGGACGTGGACCCCGTCGAGGTCCAGGCCTGG 318060 36 100.0 35 .................................... ATGATGACCGCCGTACCGAAGACCGCCAGGTCGAA 318131 36 100.0 35 .................................... CTGCCTGCGGGACCCCAATGGAGACCCGATATCTC 318202 36 100.0 36 .................................... CTGCCAGCTGCTCTTGTGGGTTGCTCATGGCCGCCA 318274 36 100.0 37 .................................... CTCACGGGTGATGTCCCGCAGCTGCCCGGCAGGCCCC 318347 36 100.0 34 .................................... TCCTTGCGACGTGGTGGACTCCCCGGACCAATTA 318417 36 100.0 35 .................................... TGGGAGACCGATGGCGACGAGCGGCATATCCACGA 318488 36 100.0 35 .................................... ATCGCTCCTGGCCCGACCCCTGAACCTGACAATCG 318559 36 100.0 37 .................................... GGACGGCAGACAGTTCTGCAAGGTCTCGCTCGACTAC 318632 36 100.0 36 .................................... CTTCGACTTCACCCACGCCGAGGCCTTGTCGACCGC 318704 36 100.0 36 .................................... GGATCTGCGTCTGGCGAAGGACGGCAATCAGCAGTA 318776 36 100.0 35 .................................... CAGTGGATCGCCGACGAGCTGACGAAGTTCAGGAA 318847 36 100.0 33 .................................... TGTACGGCGTGTCGGGTCGGGCGAACATGGGGA 318916 36 100.0 39 .................................... CCAGATCAGTCGTCGCCCAGATTGATATCCAGACTGCAA 318991 36 100.0 36 .................................... GGCCATGCGCTCCGAGTCAGTCGGCCACAGGTGCGC 319063 36 100.0 34 .................................... TTGACTGATGATGAGTTCATCTACAACGCGTGCG 319133 36 100.0 33 .................................... CGGTGAGCCTGGAACCGTCGTCCTGCGCCAAGG 319202 36 100.0 35 .................................... CGGCGAATGACCCTGTACCGCGACCCGACGATCAA 319273 36 100.0 36 .................................... CCAGACGGCCAGCCTGTTCTCCGAGCACTCGGACGT 319345 36 100.0 35 .................................... AGTGGGCGGGCGCCGACCACGGCGGTGTTCCCCCA 319416 36 100.0 38 .................................... TGGGCCCGAATGTCGTTGATGCCATCGAGTGGTGCCAG 319490 36 100.0 36 .................................... TGTTCCGGGGAGTCGCCACATGAGGCGGTCCTCGTC 319562 36 100.0 37 .................................... ACTGGGAGGACTCCCTGTGCCCCGGCTGCGGCAAGCC 319635 36 100.0 34 .................................... CCTGGACGAGGTTCTTCATGAACACCAACCAGGG 319705 36 100.0 34 .................................... GTCCCCGTCGTGCTGCGTCCGGCCGCCGGGGTTC 319775 36 100.0 36 .................................... CGAGATGCCATCATCGGTGACATAGCCCAGGTCAAG 319847 36 100.0 36 .................................... TCCGTCGTCGGCCCACTTGACCGCCGCATGGCCTTC 319919 36 100.0 38 .................................... TCCCAGTCAGGAGATGACACCATCGCATCCGTCCTCGC 319993 36 100.0 36 .................................... CGTCGACCCCGAACCGGGCCCGTCGATCTGCTGCAG 320065 36 100.0 39 .................................... CTCCCGGCTCCAGATGGATGCCATGCGGGTCCGCGCTGG 320140 36 100.0 36 .................................... GAGAGTGGTGTTGGGATCCATCCGGTGCAGGGAGCG 320212 36 100.0 38 .................................... CTGCGGGTGATGGCGGAATTGGTGTCGATCTTCGGAAG 320286 36 100.0 38 .................................... CCAAGGATCGCCCCAGTCACCGGCGACGCAAGCCCGTC 320360 36 100.0 38 .................................... TGGCGCGACAAGGGCGCCCTCCCGCTGCACGACAAGGA 320434 36 100.0 35 .................................... CACCGGATGACATCGGTGCGGCAATGACAGGGGCG 320505 36 100.0 36 .................................... GGAGTTGGAGCCGGGGGAATCGTCTGGCTCTGGGGA 320577 36 100.0 36 .................................... AGCAGCCATGGACTGGATGGCGGTCACCTTGAGCCG 320649 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 56 36 100.0 36 GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC # Left flank : ATCGCCCGCGGTTTGGCGACCTGCTCGTCCTGTTCGGTGAACACCCCGACCGGACAGGATGGCTCCGGGCATTCCCAGGTCCGTTTCCGCCACAGCACCTCGACCGGCCGCCCGAACGACGGAGCATCGACCAGCCGGACCGTTCGCCGGCCATGACTCGAGGCGACCACCCCACACGTGGGGCAACCCACCAGCTGCCGGGCTGATTCGGCCGTGACCCTCAGCCTGCCGCCGTCGTCACACTCGACGCCTGTCACGTGCAGCCCGGGCAGGCCGACCAGCAGATCGCAACGGTCGCAGTACTCGTCATAGTGGCAGCGCACGGCGCAGCCCGTAAGCTCAGACACAGGTCGAGGTCCTTGATGCAGAAGTGTGGTAACTCCTGATCCTGAGGGCCTCGACCCCCTACCCCACCGACCCCGGCCTCACCGGCGTGTCCCACTCACCCCCACCACAGATCCGAAGAGCCAGGTTGGGGGTGCGCACCCGAACGCCAGACC # Right flank : CCTCGCGGGCCCGCCCGTCCCACACCTCGACATTGGCGGCTCTTCGGATCTGTGGTGGGGGTGAGTGGGACACGCCGGTGAGGCCGGGGTCGGTGGGGTAGGGGGTCGAGGCCCTCAGGATCAGGAGTTACCACACTTCTGCATCAAGGACCTCGACCTGTGTCTGAGCTTACGGGCTGCGCCGTGCGCTGCCACTATGACGAGTACTGCGACCGTTGCGATCTGCTGGTCGGCCTGCCCGGGCTGCACGTGACAGGCGTCGAGTGTGACGACGGCGGCAGGCTGAGGGTCACGGCCGAATCAGCCCGGCAGCTGGTGGGTTGCCCCACGTGTGGGGTGGTCGCCTCGAGTCATGGCCGGCGAACGGTCCGGCTGGTCGATGCTCCGTCGTTCGGGCGGCCGGTCGAGGTGCTGTGGCGGAAACGGACCTGGGAATGCCCGGAGCCATCCTGTCCGGTCGGGGTGTTCACCGAACAGGACGAGCAGGTCGCCAAACCGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 2 322193-323308 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025570.1 Acidipropionibacterium jensenii strain JS280 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 322193 36 100.0 36 .................................... ATCAGCAAGCCCCGCCTCAACAGCCTCATCCGCCGT 322265 36 100.0 38 .................................... CACGGCGGAACGCTAGTCGATCTGGTGTAAATTCCGAA 322339 36 100.0 36 .................................... CGGCGGACAGTGGGTGGAGGTTCAAGGGATGGCCTG 322411 36 100.0 35 .................................... AATTTACCACACCTCGACTAGCGTTCCGCCCTGAT 322482 36 100.0 34 .................................... TGGTTGCACACCCTACTACCGGGCTCGTTCCTAC 322552 36 100.0 34 .................................... GTAACCACGATTCTTGCTGCCGCGTCGCCGTCTC 322622 36 100.0 35 .................................... CTGCGAGGACCCACCACAAGCGGCGAGTAGCGGCA 322693 36 100.0 37 .................................... TACAGGTCACAGGACCCGGTGATGTGTCCCAGCCCGG 322766 36 100.0 41 .................................... TTGTCGAGTGCTTCCATGGTCTGGCTGGCACTGCTCATCAG 322843 36 100.0 34 .................................... ACGCCCGATATCGTGTCTGCGGAGTGTCCCCGGT 322913 36 100.0 35 .................................... TTGCCGCACCACTGTGATAGTCGTCCTCTGGCACG 322984 36 100.0 37 .................................... CAGGATGGCCGGCGCCGGCACCTGGGCCTCCTCGGCG 323057 36 100.0 37 .................................... GCGCGGCGACATTCCCGGAGACCTTGTCATCGACCAC 323130 36 100.0 36 .................................... CGACGCGTCGGCAATCTGCCACAAAGTTTTACCCGA 323202 36 100.0 35 .................................... CATACACCCCCGCCCCAAACTTGATATTTACCATG 323273 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 16 36 100.0 36 GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC # Left flank : GCATCCAACAAGACACCCTCGGCCACCGCGGGACGCGAAACGACCCGCTGTACAAGATCCGGACCATCCTGCGCTGCGGCGCGGAGAACCTCACCGAACGTCAACAACACCGCCTCGCCGAGGCGATCGCCGCCGATGAGCGTCATGAAGAGGTGTACGTCGCCTGGCAGTGCGCTCAACGCGTCCGTGACGTCTATCACGCCGCCACCCCAGCCGACGGCCGGGCACTCGCCGAGAAGGTCCTGACCAGCTTCCCCCACTGCCCGATCCCCGAGATCGCCCGACTCGGCCGCACTCTGACACAGTGGGCCGACGCGTTCCTGGGCTACTTCGACACCGGCGGCGCCAACAACGGTGGTACTGAAGCGGTGAACGGCCTGATCGAGTTGCACCGGCGCATCGCCCGAGGGTTCAGAAACCGAGAGAACTACCGGCTACGCATGCTCCTCATCGCCGGCGGCCTCGACCAGCCCCCACCCCAAGTGTGAAGAGCCACATTG # Right flank : CAGCGGCCTCGCAGAGAGGCGTCTGACAAGGTTCGCCACCGGTCTCCCGCGAGACATCATCCTACTCACTCCGCTCGATCGTCCGGAGTAGACGCCAGAACCGGTGACAGGACTGCGTTGACAAGGGGAAACGGCATCGCGAGCGGTCCCCGTGGTTTCGCGTGGCGTCGGACCGCTCGCCGACCCGTTCAGATGATCATCGTTCCGTTACCGACGATGTAGCGAGAGTGCCCCAGCCATGTCACCGCCCGGTCGTCCGCAGTCTTCGACAGACCAAGGTCGCTCACCAGCACCGAGTCCTCGTCCCGATTCATGATCTCCTCGAGCTCGCGCTGCAAGGTGAGCACATGGCTGGGCGAACAGTCGACCATGAACACGCTGTACTGGACTCGAAGTCCGAATCGCTTGAGTGTCACTGTGATGTGACTGCGGCGCTTGTCATCCGGGACGTCGTAGGCGATGAGAAACCGATGACTGTCCTGCCTCACCGGATCGTCATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //