Array 1 5436-3148 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOV01000002.1 [Luteovulum] sphaeroides subsp. megalophilum strain DSM 18937, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5435 29 100.0 32 ............................. ATCGCCTGGCAGATGGAGTTCTCCGGCTACAT 5374 29 100.0 32 ............................. GGCGAGAGCATGGAGCCGACCCTGAAGGACGA 5313 29 100.0 32 ............................. TCAGCGTCGGACGCATTATATGACAGGTTGGC 5252 29 100.0 32 ............................. ACCTCGGTGGCCGCGTCCGACCACCATGAAAC 5191 29 100.0 32 ............................. TGCGAGGGTGGTGGCATGAACCCGGTTCCTCT 5130 29 100.0 32 ............................. TTCAAGAACGACGCCGAACGGTCTGCAGCCGC 5069 29 100.0 32 ............................. GCGAACCCGCTTCTCGGGGTGACGATCACCGA 5008 29 100.0 33 ............................. CGCGCATCAGTCTATCAATGGGGTGGGTGCTCA 4946 29 100.0 32 ............................. CGCGGTGATGCGTGGCACGCGGTGGCTGAGCT 4885 29 100.0 32 ............................. GATGTGCAGGTCTCGTGCTGCGGCAACAGCGT 4824 29 100.0 32 ............................. GGGATCATGTTCAACGCGGCCGGCGGCGCGAC 4763 29 100.0 32 ............................. TGGCTGGACGAGGACGGCAACCCGGAGGCCCC 4702 29 100.0 32 ............................. ACGACGGACGCCTGATCCTCCATGTAGGCCCA 4641 29 100.0 32 ............................. GATGCGGTGCAGGCGTGGTGGGACAGCCAAAG 4580 29 100.0 32 ............................. GCCTTCGCTCAGCAGGAAAAGAGCATCGAGCG 4519 29 100.0 32 ............................. TGGATGACGCTGGACGCGGCGCTTGAGCTTTA 4458 29 100.0 32 ............................. GACATTGACGGGCCTGTAGATCTGTCCGAATG 4397 29 100.0 32 ............................. GCCGCCGAGCTTGGCGCGACCATGGACAACGC 4336 29 100.0 32 ............................. AGTTGCATCCAGAACAACAGCGGTCATTCGCT 4275 29 100.0 32 ............................. GCCCACGAGCGGGTGCAGGACGTGTCGAAGAT 4214 29 100.0 32 ............................. GCCATCGCCGATGCCCGTGCGATCTGGCAGGC 4153 29 100.0 32 ............................. CGGCGAACTTATCAACGATTGAGGTAATGCTA 4092 29 100.0 32 ............................. GACGGCGACGGCGCCTATCTGCTGCGCGAGAT 4031 29 100.0 32 ............................. ACCGACGCACAGGCAGCGGCTGCGGCCTCCGA 3970 29 100.0 32 ............................. CAGGGTCTCCGCCAGCCGCTCCACCGCGCTCG 3909 29 100.0 32 ............................. CGGCTGGGCGGCTCGCGGTGCGGGCTGTTGCG 3848 29 100.0 32 ............................. AAGCCATTGCCACCTGGACGCTCGGCGACGTG 3787 29 96.6 32 ................A............ AACCGTGTCTGAGTCTGGGACTGTTTGGGCCC 3726 29 100.0 32 ............................. GTGCCGATGAAGGAGACGGACGCGGATCGAAA 3665 29 96.6 32 .......T..................... CGGCTTGCGTAGGGCTTTACCGCGACCGGGCG 3604 29 100.0 32 ............................. ACGGTCGTGCCGGACAGCGCCACGCCGGTGGA 3543 29 100.0 32 ............................. ATGACCGCACCGCGCTGATGCAGAACTACGAG 3482 29 100.0 32 ............................. GATCAGGCGAAGGAGGCGCAGAAGGAAGCCGA 3421 29 100.0 32 ............................. CCCGGCATACCTGTGACGCTGGTGGTCGGCCC 3360 29 100.0 32 ............................. GCGCAGGGGATCTACCCCTTTGAGCGTGACCT 3299 29 100.0 32 ............................. TTTCCTTTACCTCGCCGGGATCAGGATCAACG 3238 29 93.1 33 ..........T..A............... GGCACACCCGGTGCCCGTTGATGTGCTCACCCG 3176 29 96.6 0 ....................A........ | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.5 32 CCGTTCCCCGCACGCGCGGGGATGTCCCG # Left flank : GCCTTCTGTCGCGCATCATCCCGGCCATTGAAGATGTTCTCTCGGCCGGTGAGCTGCCCCGCCCCGATCCACCGCCCGAGGCGATGCCTGTTGCCATTGAGGACAGTGTAAGCGGCGACGAAGGCCATCGCGGATGATGGTCGTGGTGGTGGTCAACGCGCCGCCCCGGCTTCGCGGCCGTCTTGCTGCGTGGCTGGTGGAGCTGCGGGCCGGTGTCTACGTCGGAGACTACTCGGCCCGGACGCGGGAAATGATCTGGGAGCAGGTGCTCGGAGGGCTCGATCAGGGGGACGCGGTGATGGTCTGGAAGGCGCCCACCGATCAGGGCTACGACTTTCGCACCTGCGGCAAGAACCGCCGCATGCCGATCGATTTTGACGGCCTCAAGCTCGTGAGCTTCTTCCAAGCCAAAGAGAACTGACACCGCGCCACGAGGGCCAAAAGCCGGTGCGCTGTTTGACATTGTAAAAACGCTTGTTCATCAGTCTTCTGCAGGAAGA # Right flank : GACGAGAAGAGGAAAGTGAACTGCAGGCTGCCCCAGTGCCCGCACTCGCAGGGATGAAGCGGCCTGTAGCCATCCGGACGTTACGGGGGTTTCGAGGCAAGTAGTGCGCGCGCAATTTCGCTCCATCGTCACCTAAGTCCTCTAGGGCGTAGATCACGTGGGCTTTTTTTCCTAATTCGCCGCGCGTGAAAAGGAAGGTTCGAGCGCCGGTGACACGGGACCTCCCTCCGATTTTTCGATACCCCCCGGTGGGGGACGGCTGCGGCGCCCGTCTCGGAGGGGCTCGAGGGCGAAGCGCCCGGAGAGCTGGGAGCTCGCCGGGCGCTCGCATTGGATGGCGGCAATCCGCGCCGCCTCAAGCTGGCCTCAGCTCCAGGCCTCGCGGAGCGCGTCGAGGCCGCGCTGGAGCCGGTCGAGCTGGCGGGCCTCGTGCCGTCCGTTGAGCCGCCCGGGCATGCTGCGAAGCGACTGGTCGTCGAGCACGACATGCTTGACCACCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCACGCGCGGGGATGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //