Array 1 1028245-1027197 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP034160.1 Epilithonimonas vandammei strain H6466 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
   1028244	    47	  95.7	    30	T............................................G.	TTCCCTTGTAAAACGCATTTGCAAAAGTTC	
   1028167	    47	 100.0	    30	...............................................	TGTAACGGTGAAACCCATCTACAACTTCAA	
   1028090	    47	 100.0	    30	...............................................	CCTTTTTCACATTGTGACTCCAGAAATAAC	
   1028013	    47	 100.0	    30	...............................................	GGCAAATTTAAACAAAAAGAGTACACCTAG	
   1027936	    47	 100.0	    30	...............................................	CAACCTGTTGATGCCCCATACCATTGCAGA	
   1027859	    47	 100.0	    30	...............................................	CTGGTTGAACTCTGTTGTGACGCACTTCTG	
   1027782	    47	 100.0	    30	...............................................	ATCTATTCCAAAAAAGTAGGAAGTCAGAAA	
   1027705	    47	 100.0	    30	...............................................	TTGCTCTTAATAAACTTAGAAATGGCTAAG	
   1027628	    47	 100.0	    30	...............................................	ACTGAGAGAAATGCTCGTAGAGCTGAAAGC	
   1027551	    47	 100.0	    30	...............................................	AGAAACCGATAGGCTCACACGATATTCTAT	
   1027474	    47	 100.0	    30	...............................................	TCTCGCTTTTTATAATCGTCATCTTCACCG	
   1027397	    47	 100.0	    30	...............................................	AAAAACACAGTTATGGATGCTATATCTTAC	
   1027320	    47	 100.0	    30	...............................................	GGTCCCGTCAGCTGATTCTATCCAAGCACA	
   1027243	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        14	    47	  99.7	    30	GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC	                              	       

# Left flank :   ATAAAATATTTTTTTTACAACTGAGACAAAAAGGCACAGTATGTGGTAGTATCTCATCAATCACACTAAAAAATAAAATTATGAGAAGTCTATTATGGTTAGTCGCTGCTATTTGTATTGTAGTATGGCTATTAGGAATGCTGGGCGTAGTACCAGGAATGAGTACAGGTTATCTGGTTCATATATTATTGGTAATCGCTGTTGTAGTGGTATTGTTTAATATTATCTCTGGCAGAAAACCTCTTGACTAAGTTTTCTTTCCACTGAAAAAATAAAAACAGCTTGTAAATATGTACAGGCTGTTTTTTTATGTAAGTCAAGGCTGATTATGGATTTTATTAACATTGGATTTAATTAAATAAAATGAAAAGAATAATACCGCAAAAAACAGTTTTCAATCATTTCAAGTTATTTTTAATGGCTAATAGTTAGCATTTATTTAAACATTACTACCTTCCTCACATGATATAACTTCCTTCCGCATCAAAACTTACAATCCA
# Right flank :  CTCAAAAAAAATAATCTACTGGTTTTCAGTAGATTATTTTTGTTCTCAGGATTTAAAATTCAGAATAATTCGAGTTGTTGGAAGGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATGTCTCCAAACTGTTTATCGGTAATGCACATAATGGCAACCTTTCCGGCTTTCGGAAGCATAAATTTTACTCTTTTGATATGAACTTCTGCATTTTCGCGGCTCGGACAATGACGCACATACATCGAAAACTGGAATAAAGTAAATCCGTCATCAATCAAAGCTTTCCGGAAACGGTTTGCATCTTTCATATTCGCTTTCGTTTCGGTCGGGAGGTCATATAATACTAAAACCCACATAATTCGATATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTGTTTGTTTGTCATAACGTTTGCAGCCCGACCTGAGTGGAATCCTTCAACTCCGCTCAGGATAAACTACAGGCGGATAAAGCTGCCATA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.09%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-2.70,-2.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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