Array 1 2082-1320 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GG704687.1 Lactobacillus jensenii SJ-7A-US supercont1.6, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      2081	    36	 100.0	    30	....................................	AAATTTGAAACTTAAATTTGTGTGATTAAG	
      2015	    36	 100.0	    30	....................................	AGTTTAGAGTTTGACGAAGAGCAAGACGCA	
      1949	    36	 100.0	    30	....................................	TTAACGTATTGCCATAAAGCATTAACAACT	
      1883	    36	 100.0	    30	....................................	TGAAGATGGAGAGATTGCTGCAGTTCTTGT	
      1817	    36	 100.0	    30	....................................	AAGCAAAAAAAGTATATCCAAAAGGAACGG	
      1751	    36	 100.0	    30	....................................	TTCCAATGGTGAAACAAGAGTTATCAAATA	
      1685	    36	 100.0	    30	....................................	TGTTGCAAGCGCCGACCCTTATGGTGGTAT	
      1619	    36	 100.0	    30	....................................	ACTACTTTCAATTTCTCTGTCAAGCTTCTT	
      1553	    36	 100.0	    30	....................................	TACGCCTAGTGGCTATATTGACTTAACTAG	
      1487	    36	 100.0	    30	....................................	GAAAACTTGAAGTCGCAACTCAATAGCGAG	
      1421	    36	 100.0	    30	....................................	AAAAGTAGTCGATGAATATTTAAGGTTAGT	
      1355	    36	  97.2	     0	...................................A	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  99.8	    30	GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC	                              	       

# Left flank :   CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCACTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG
# Right flank :  GTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGCT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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