Array 1 292062-293494 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQLV01000003.1 Citrobacter braakii strain S1279 scaffold3.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 292062 29 100.0 32 ............................. GCGGTAATTCAGGCAATGGCCGGTCGTGGAGA 292123 29 100.0 32 ............................. CCCCTTCGGATACCCTTTCGATTTCGCGCTTA 292184 29 100.0 32 ............................. TACCCTGAGCGCATCATCGAGGCTATCCAATA 292245 29 100.0 32 ............................. GCCTGTTCATTCCCGACGTTATGACGAAATAC 292306 29 100.0 32 ............................. TCAACGATGACGATTGTATTAACATTTGAACC 292367 29 96.6 32 ............................A TGGTCGTTACCCGCACCACGCGATCAGCACTC 292428 29 100.0 32 ............................. CGCGAAACCTGGCGAATAGCGAGCAGGGCGGC 292489 29 100.0 33 ............................. ATATTTTTTGATAAATTGAATATCCTGCCATGG 292551 29 100.0 32 ............................. TTCATTTGGCCTGCCAGCGCCATCTGGATGAT 292612 29 100.0 32 ............................. GCCTGCGCGAGCCGCAGAATTAGACAATGAGG 292673 29 100.0 32 ............................. GCCAAACGGGCACGGGTTCGCATCACATTCTC 292734 29 100.0 32 ............................. ACAAACAGTAGCAGAGCACCCCACACCGGGTA 292795 29 100.0 32 ............................. TGGAGCGGCCGCCAGGTGATTGGCGGTATTGG 292856 29 100.0 32 ............................. TTAAAGGAGATTTGGGGAGGGGTTGTTTCGTT 292917 29 100.0 32 ............................. CACTGCCGATCAATACGAGCGGCTTCTTTCTA 292978 29 100.0 32 ............................. ATATCTTTGGTTGTCTTGCGTTCTGCATGCAC 293039 29 100.0 32 ............................. CCGAATTTCTCAGCAAATGCCCACCAGTCGCG 293100 29 100.0 32 ............................. AATCAATACCACGTTACCCCGGCGGACAATGA 293161 29 100.0 32 ............................. GCCGTTTTACGATCGCTTGTTACCACGTTGGG 293222 29 100.0 32 ............................. CCGCTGGAGTCGATTAGCTTGGGTGAGTTGAT 293283 29 100.0 32 ............................. TCAACGACATTATTTTTCTCAGGATAACTGAT 293344 29 100.0 32 ............................. TTTGGGGTTCGGTGCGTCATTTGTGCATAACG 293405 29 96.6 32 ............T................ TATTCAGAAGGAGTTCCTTTACCTGCTCTGAC 293466 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 24 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCTGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACTGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAAAGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCAGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //