Array 1 34453-35015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZK010000008.1 Pseudomonas sp. MSSRFD41 NODE_8_length_244311_cov_56.719140, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================= ================== 34453 28 100.0 32 ............................ TGGTACTCCCCAGCACCAGGGCGCATCGGCCT 34513 28 100.0 32 ............................ AGATCGCGCCGAACATGTGGATGGCCCAGCAT 34573 28 100.0 32 ............................ AGTCGGGGCCCGCTGCTGGCGTCGGCCTCCGG 34633 28 100.0 32 ............................ ATCAGCAGCAAGATGGCCAAGCAGCGTGGCCG 34693 28 100.0 32 ............................ TATGACTAACGAGCAGCAAGCGCTGGCAGAGA 34753 28 100.0 32 ............................ GTTAAGGTCAGCAAGTAATGGGCGATTACATT 34813 28 100.0 32 ............................ TCGGCGTCCACCAGTTCATCGGTGTAGTCCTC 34873 28 96.4 87 ...........C................ CCAGTCCTTCAGCGTCCTTCGGTGCTGTTTATCTCGATTGCCGAACAGGCAGGCAACACACAATCCATCATCAATCCATCGGCACCC 34988 27 85.7 0 ...-.........G........G...G. | T [35009] ========== ====== ====== ====== ============================ ======================================================================================= ================== 9 28 98.0 39 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGCCCTGGACCAGTTGCTGGCCATCGATTGGCTGACCGGTATGCGTGACCATGTACAGATCGGCCAGCCCTGCTCGGTGCCGACGCCGGTGCAGCATCGCCATGTCAGCCGGGTACAGGTGGACAGCAGTCCGGCACGCCTGCGTCGCCGCCTGATCAAGCGCCATGGGTTGACCGAGGACGAAGCCCGCCAGCGCCTGCCCGACAGCGCGGCGAAACGTTGCGACCTGCCGTTCGCGGTGATGCGCAGCCAGACCAGCCATCAGCTGTTCAACCTGTTCATCCGCCACGGCCCGTTGCTCGAACAACCCCAGCCCGGCACGTTCAACGGCTATGGCCTGAGCTCCAGCGCGACAGTGCCCTGGTTCTGACCCTTTTTTCCGGGTGCAGTGGAGCGCTTTGTAAAATCAATGACTTACAAAGCGCTTCAGAAAAAGGGTGTACAGCAACCTTTAACGGCCTTTCTTTTGAAATTCAGGAAGTTATAGAGAAAGTGCTCTA # Right flank : ACCCGCTGCACCCGTCGCGGGCCGGCCTGGGACTCTCGGGCCGGGCGCGTCTTTGTCACATCCCCTTCATCGCCGCTGGCTAAGGTGGCCTCTTTTGACCATGTCAGGGAGTCACCATGAGCGAGTTCAACCTCGGCCGTCGACGGATCATGCAAATCGCCGGGGCGGGGCTGTTGCTGCCCAGCCTGGCGCCGGCGGTGATCGCTTCGGTCAAGGATCGGCCCAAGCTCACCGATGGCGTGCAGTCCGGGGACTTGCAGGGCGATCGGGCGATCATCTGGAGCCGCAGCGACCGCCCGGCGCGGATGGTGGTGGAGTGGGATACCCGCAGCATGTTCACCAACCCGCGGCGCCTGGTGTCGCCGCTGGCCGATGCCCGCACCGACTTCACCGCCCGGGTGGACTTGAGCGGGCTGCCGGTCAACCAGGCGATCTTCTACCGGGTGACCTTCGAGGACGCCCGCACCGGGGTGGCCAGCGAACCCTGGTTCGGCCATTTG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.55, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //