Array 1 25755-25885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGMW010000026.1 Leeuwenhoekiella sp. Mr9 Scaffold26, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================ ================== 25755 23 100.0 32 ....................... ATTTGATGGAGGCCAAACGCCGAAAGCAAATG 25810 23 100.0 30 ....................... GCCGGACGAGGCCTAAGGCCAAGATCGCTT 25863 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ================================ ================== 3 23 100.0 32 TATCGAGAACTGTCAGTTCGAGT # Left flank : AAAGCTCAGATACAAATGGTTTTGGAATGGGCTTACTGTTCGTACGCGAATTGATTGAAGATCTGGGAGGAGATCTTGAAATCAGTTCCCAGCCGAATAAAGGAACTCAAATCACCATCGCTTTACCCTTAATTTAAGGGCACTTCTCCGCTAGAGCTTTCCTGTTCTTTAGCTGTTCTGCTTGCTTGCAATCAACACATTTGCTGTGGCTTCGATAATTTTGAATGCGAATGCAGAATGCTGAATGAAGAGTTATTTTAAATTTTGAATTTTCAACTTTAAACCTTGAACCCGACTCCACACGCTGAACTTTAAACCGATTTCTTACCTCTTAATTCCTACTTCTCACCTCCTACCTGCAACTTGCCTCCTGCCACTGTTCCTGCGCGATTGCATCGCGTACCCTGATTTTACATTTCAAATAGGCCTCTAATTAATCTAAACACCTCCCGCCCATCTGAAGCAAACCTTTTATTGAGGCCTTAAGCCGTAAGCAAATG # Right flank : TGCCGGACGAGGCCTGAGGCCAAGATCGGTTTATCGAGAACCCTTTTCAGTAACACATATTCTAACCCGGAAGCGCAATAAAACATCCCTCCAAACCTCCCTTCGAAGGGAGGCTTATCCTCATCCCCCCGCCCTTCTCCCGCAGAGAAGGGAGCATAATTTTTAACTAGAATTGTACGTTAATTTGATGATCAGGCTTTTTGAATGCCTATGCCTTTTTTAAACATAAGAATAATCACCCTTCCTCCTGTCGCATCTTATACTCCAGTTTTAAGATAAGTTCTTCCAGGAACTTTGTTCTGCTCCCCTTCCGGGCTTTGATCTTGCCATAGGTCTTATAGACCCCATCCAGTTTGATGTTGAAGAAATCTTCAAAGGAAGCGACCAGCGTACTCAGGTCAGACAAACCATGGTTTAGGTTTTGAGAAGCATACAGGGCATAAATGAGTTCGACCAGCGCAGTCTTAGAACCAGACCACAGCATCACCGGGTGTTTTTGA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATCGAGAACTGTCAGTTCGAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 140884-138918 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGMW010000009.1 Leeuwenhoekiella sp. Mr9 Scaffold9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =========================================================================================================================== ================== 140883 46 100.0 29 .............................................. TAACCAAAACTATTAAAAATGAGTACAGC 140808 46 100.0 30 .............................................. TTTAAACTAACAGGTAACTGTTACTGGTAC 140732 46 100.0 30 .............................................. AGCAGGTTCCGGTAGAAAAAAGATACATAC 140656 46 97.8 30 ...T.......................................... TTAGGGCAAAAGGCCCACATTTTTAAATAG 140580 46 100.0 30 .............................................. TATAGTTTACGGCATACGTGCAGCACACAG 140504 46 100.0 30 .............................................. AGAAAGCAATTTGTAAATAAACTGATTGCC 140428 46 100.0 30 .............................................. CCTACGTTTATAGTAGTGATTGAACTTTGT 140352 46 100.0 30 .............................................. TATAATCAATACGCCCTGTAATAGCTATTT 140276 46 100.0 30 .............................................. ATCACTGCCACACATTGCATACAATCGTTT 140200 46 100.0 29 .............................................. AGACCGTCACGGCGGCGATATAACCGAAT 140125 46 100.0 29 .............................................. CGCGTTGTAGTCATCTACCGCGCAGCTTT 140050 46 100.0 30 .............................................. CGGCAGCCTTAAGACCGGCGGCGTTTTCTT 139974 46 100.0 30 .............................................. TGATTATAGCTACCATATTGACAATGCAAT 139898 46 100.0 30 .............................................. CTTTGATGATGGCTTTTGCACGATCATCGC 139822 46 100.0 30 .............................................. TTTGTACCCTATATGACCGACTGTCTAAGT 139746 46 100.0 30 .............................................. CATACTCCTCTTCATCCATCTGTGTCACTC 139670 46 100.0 30 .............................................. TGATGAGCAAAAAGGGGTAGAGCATTTCTG 139594 46 100.0 30 .............................................. GCATATTGAGATTAAAAAAGATCAGGACAA 139518 46 100.0 30 .............................................. AAAGTGACCAAATCCCCTTCAACTAAAGAT 139442 46 100.0 30 .............................................. TAAACTGGTCCGGGCCTTTAAAAAACTACC 139366 46 100.0 30 .............................................. CCGGGAGACCTTCCACAACACATAATGCAT 139290 46 93.5 30 ..........C..A..........T..................... GCCATTAGAGTAAGGTTTTAATGAGATTGA 139214 45 95.7 30 .....................-.......................A CCGGAAGCGTGGTTTTTTTGTTGTCACAAC T [139200] 139138 45 84.8 123 .....A...............-.........C..C...A.A...G. CTTCAGTTTTAAAAAACACATTGCTCGCAATCTACCCCAAAAATATACTGCGGCCAAACTCTGAGGTTCAGCGCAGCTAAAGCAATTCACAACCTCAGGCTACATCGGATGCAGTATGACAAC TT,T [139101,139125] 138967 46 80.4 0 ....C..................A.....A....AT...C...GTT | T,AA,A [138930,138932,138936] ========== ====== ====== ====== ============================================== =========================================================================================================================== ================== 25 46 98.1 34 CCTGTGAATCATCCCTAAAATTAGGATTCTGAAAGCAATTCACAAC # Left flank : TATAATCAGGTGGTCGATAAATAAACTCTAAAATCCAAACTATTTTGGAACATGCGCATTTATCACGACTTAATCAATACCGAAGTATGTGGGTACTCGTATTTTTTGATTTGCCAACCGAAACCCGGACCGAGCGAAAAACGGCATCGCGTTTTCGTAAAAATCTGCTCGATGACGGCTTTGCCATGTTTCAGTTCAGTATTTATATGCGCTTTTGTGCCAGCCGTGAAAATGCCAATGTACACATCAGGCGTACTAAAAACAGCCTCCCTAAAAAAGGAAAAATCTGTATTATGCAAATTACCGATAAGCAATTTGGTATGATGGAGCTTTTTCACGGTCAAAAAGAAGTGGAACCGGAAGCTCCTAGTCAACAACTCGAACTTTTTTAAAAATGAAAATGTCAGGTCGAGCGCAGTCGAGACCTTTTGATAAAGACTATTTTTTTATTTCTAAAAAATACCATAAAAAACAGGATACCAGGTTTTTACGCCGGGTAT # Right flank : TAGATAGTCAACCTTCATTAAATTTGCAATAAGTTGAAGATAGCGGTTAAGGAGCAGCCAACCCTGGCAGGTGATGGGGTTGGCTTTCGGCTGATAAGGACGGCGCTATTTGATATTAGCCTGCGATCAATGCTTCTCCAGACGGTAAGGAAGAGCCATTCTTTAGGAAGTGGCTGTAACGGCTGCCTCGGACAGCGCCTGGATAAGTATCCTGAAAAATAAAGAGGCTGTCCTGAGTAATCAGGCGGCCTCTTTTAAGTTTTACAATTCATATATGGGATAAATATCTAAAAAAGTATCTGTCTTCTTTTGGAGTGATACGATTGCACCGCTAATTATCTTATGATTTTCAAATTAGGGCTAGGTCGTTTTGGTACTGTATTTTTAGATTGCAAAACTTCCTGAAGTTTGTACATATCTTCTTCTACTTTTTTGTCTAAAATCCGTGCGTAAATCTGTGTCGTTGCAATTTTGGTATGACCCAGTAGTTTAGATACGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGTGAATCATCCCTAAAATTAGGATTCTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //