Array 1 778697-779189 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGH01000003.1 Eisenbergiella tayi strain NML 110608 BEI61_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 778697 32 100.0 35 ................................ TGGATATTACTTCGTGTGGCTTCCGACAGGTTATA 778764 32 100.0 35 ................................ TATTTTTATATTGGATCCCCAGACAAACTCCACAA 778831 32 100.0 33 ................................ GTAAATATTAATACTTGCATTCCAATTACCATC 778896 32 100.0 33 ................................ CTGATGATATTGACAAACGGGAAGGCAGCATTG 778961 32 100.0 33 ................................ CGGTTTGTTGCCACCCAAAATATCATCCAGGAT 779026 32 100.0 35 ................................ TGCCTCTTCTTCTACTATTTCAAGTTGTCTAAATT 779093 32 93.8 33 .............C.................A TTCTTTAAAGGCGATAATTTCACCATAGGATTT 779158 32 93.8 0 .............C.....T............ | ========== ====== ====== ====== ================================ =================================== ================== 8 32 98.4 34 GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Left flank : AATTTCATTTTTAAGTAAGACAATGATTTGAAAAAAGAATATTGCGAAAGATTTGAATCAATATGAAATTTATCTTAGATATAGATACTGCAGGAGGTATTATAAAAGTCTTAGTTGAAGTATAGGAAACTATGTACAATTTACGAATTAATGAAGAAAGTTGCTTATCACTTTAAATTTTTTATGCTATACTTTAATTTATAGAAAAGATTGTTATTGTATAAGTATAACAAAATGCGAAGTAATATGTTGATTTGATGTTGGTATGAATAGAGTTTTCAAGGGTTAAGGGCACTGATTCAATTGGGAAAAAGGGAGCGATTTATGTTGGTGCGAATAGGAAGCGCACATGAAAGTCCCGGGAGATTCGCACCAGAAAAAGAGTTGTTATAATGGTGAATAGATTGAAAGTGTTTTAAATAAAGATTATATGAGAGAAAAAATAAAATAATTATACAAATTAAGTTTGTGTAATGAGATTACTTTTAGTTATATTTGCT # Right flank : TAAGTTCGCCCCTGGAGAAATCCAGGGATTTTTTTGTATAAGCCCTGCGGTATTGTGAGTAGAAAAACAAAATTCAAAATATTGTAAAAAAGTCATTGTTTTGTGGAAGAATGATTATTAAAGGATAATGAGCTATATTTTAAAAGAATATTTTAAGAATGTAAGAGAGTGAAAGTTCAAAATTAACAAAACTATCAGAAAATCAATAATAAAAGAATTATTGATTTTCTGATATATTGAAACAAATGAATGTATTTATATTTGTTTTATGCTGATGAAACAATTAATTATCATAAGAGTAAGCCAACTGAATGATAGAAAGGATTTGAAATACAGGTTAAATATTATGAAATGGGAGATTGTCTGTGTTTTGCCCTTTTTTGTAGTGGTTGAAACATATGCTAATTCGTAATATCAAAAGGACAGAATTAGTAATCAGGCTGCTTACAAGGGACTAAGTGATGGAGATTGTAAAAGCATATGAGTTATGGAGGTGCAGT # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 849658-850150 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGH01000003.1 Eisenbergiella tayi strain NML 110608 BEI61_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 849658 31 100.0 34 ............................... TCCATTTCTCCCCGTCACGCCGATAGGTCAGCAA 849723 31 100.0 36 ............................... ATATATTGGTTATGAGGTAGTCAAAGGGCGTATCAT 849790 31 100.0 34 ............................... CTTTATTTCCATCAAATATCACCGAATTCGTCCT 849855 31 100.0 37 ............................... CATTCCCTAAATTTCATGAAGAATTAGATGAGATTTG 849923 31 100.0 33 ............................... TATCATAAAACCGTGCTTTTTGCATTGGTTTTA 849987 31 100.0 35 ............................... AATAATTCCACATGCTCCGCGTCTTCCATTTCACA 850053 31 100.0 35 ............................... ATAACTACAGAAATCCATCCCTGATCGTTGGTGAG 850119 31 96.8 0 .............................T. | A [850129] ========== ====== ====== ====== =============================== ===================================== ================== 8 31 99.6 35 GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Left flank : TGATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAGTTGAATGGAATGAGGGGGAAGGGGTTACTGGATAGTGTTGAGAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATGAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGGAGGATTTGAGAAAATAGTTGGTCAATGGTGATATTTGATAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATTGAGAATGATTAAAATGTAGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTGTGAAATGAGATTTTTTTTTGGATGTTTTTGCT # Right flank : TATCTTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAAAATTTTCAACATCTACATAAAAATAGTAATTATAAACAAAAAATGTATTTCATGATATAATGAGTAGGATAAAATAAACAAAAAACACCACACTTTTGGAGGAACATGATGTTCTTAGCCCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGATCATCTGGAGGGGACTGCTGAATTGGCAGGTGAATTTGCCTCTGCATTTGGATCTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGAGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 857987-858680 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGH01000003.1 Eisenbergiella tayi strain NML 110608 BEI61_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 857987 32 100.0 35 ................................ CCTTCCGGGGATTTTTCCGTCTGGAACCTCTCGAT 858054 32 100.0 33 ................................ ATCGTTGCTACTACAGCATATATCTGCGCCCTC 858119 32 100.0 34 ................................ ATGTATCTATCGATTATCTGCTGTGCATGACAGA 858185 32 100.0 33 ................................ CCCCTGCCGGTATGGAGAATGGGAACTCAAACA 858250 32 100.0 35 ................................ CTCGGTCACTCTGGCCCATTCGGCAGGGAAGTTTT 858317 32 100.0 35 ................................ TGGGGCTGTCCTGAGGGGCGGGAACCCGTTCCTGG 858384 32 100.0 34 ................................ TTAATCTGTCATATAACACAAAGACAGATTATGC 858450 32 100.0 33 ................................ CCAAAACGGCTACGTTGGCTATTATGGGGCTTA 858515 32 100.0 34 ................................ ATATACCATGGGACATAGTCTAATTCTGTACTTA 858581 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATGCTGTTCCCG 858646 31 90.6 0 .............A...........-G..... | TTT,A [858667,858672] ========== ====== ====== ====== ================================ =================================== ================== 11 32 99.1 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATAACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTTGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTTGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGCCTCAGATTTTATTATTTGGGGAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGAAAGAGCCTCTGATTTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGCACCGGAATTTTGATGAGATATTGCTTGGGGTTGCTTTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : TATATTATTGCGATTAGGGTATTTATGTAAATCTCATAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACAGGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 859482-860768 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGH01000003.1 Eisenbergiella tayi strain NML 110608 BEI61_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 859482 32 100.0 34 ................................ ACGAATCCCGTCACGTCACTCTGAATAGCAGTCA 859548 32 100.0 33 ................................ ATCGGTGACAGATGAAATGTACCCGGTAAAGGA 859613 32 100.0 36 ................................ AGGAAATCGAGTGCGCTTTGGAATAATCCCTCTTTC 859681 32 100.0 33 ................................ TTCTGTTCCTTATCCCAAGCCAGCCTGAAGGCC 859746 32 100.0 35 ................................ AATCCCTGCATTCTCTAAACACCAATAATCAACGG 859813 32 100.0 34 ................................ ACAGACAGTATCTATTGGAGAGGTATAACATATG 859879 32 100.0 33 ................................ TCCACTTTCCGGCAACTGCTCCGCTACCGAAAT 859944 32 100.0 33 ................................ AATTGAGCCGCCATGAATTCAGCGTCCTTTTTC 860009 32 100.0 35 ................................ AGGGTAAAAAAATATTTTTTGATGGTTGGGATACT 860076 32 100.0 35 ................................ CGCTGCCGGTGCGGGGTAAAGTCTCTAACGGAGGA 860143 32 100.0 35 ................................ AGGATGTTGGTGGTAAAATTTCTACCATCTTTGCC 860210 32 100.0 33 ................................ TGCTGCATATGGCTGTACTTGCAGAATGTCTCT 860275 32 100.0 33 ................................ CTATGAAATACCTAAAAAAGAGAAGCAGGAGAA 860340 32 100.0 36 ................................ ATTGGCAGGATTAGCAGCATTACGAAAAGTCTGCAT 860408 32 100.0 33 ................................ ATACATTTATCTTCCTCCTTAGCACACTTAGAA 860473 32 100.0 33 ................................ TTCCAGGGGAAGTAGGGTATGATATTTTATAAA 860538 32 100.0 34 ................................ CATTGCCTTGTTCTTGGCTTCCTGCTCTTCCTTT 860604 32 100.0 35 ................................ AATGAAAGAAGTCATCCAGCGCTACGGGCTGCCGG 860671 32 100.0 34 ................................ CCCAACTCTGGCCCCTGTGGAAAGAAGGAATTCC 860737 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 100.0 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : AGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTTTGTTGTTATAGCATAAGGAATAAGAACAATAAATTTTATAGTCATATAATAGTTTATTGTTAGCATGATTAGAGTTTTATTGAGTAAAAGTACTTGTTTAATTATGAAATTTGCGAACAGAGTTATTGTTAGTGCGAATAGGAAGTGCACATGAAATTCCCGAGAGATTCGCACCTGAAAAAGAGTTGTTTTAATGGGGAAGAGATTGAAAATAATTTATATAAAGATATTATGAGGTGGAAAATATAATAAGTATATAATTAAGTTTGTGTTATGAGATTGTTTTTTGGATATTTTTGCT # Right flank : TTGTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATGTATCTAAGAAATAAAAGAATACATCCACTAGACAACACATTTTCGCCCTTATGACGTTTGTCAATTATTATCTATAGTAAAACAAAGAACGATTTATAATACCTATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGATTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCCTGGAAAAGGCCGAATTACCTCCATTTTTGGGTTCTGCCCTTCGCGGTGTGATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAAATGAGCAGTAATATGCAAGATATAATTAATCCGTATGTGCTCATTCCTCCTGATACAAAGAAGAAAATATATTTTGAAAAAGAAGAGCTAAACTTCAAAATACTTCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 871803-872558 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGH01000003.1 Eisenbergiella tayi strain NML 110608 BEI61_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 871803 32 100.0 33 ................................ TCTAGCAGTTTTATCAACAGTCAGTCTTTTCAT 871868 32 100.0 33 ................................ TCTAGCAGTTTTATCAACAGTCAGTCTTTTCAT 871933 32 100.0 34 ................................ CCATTCCCGTCCTTGCCCGGCTCCCCACACCTTT 871999 32 100.0 33 ................................ ACCACTAGACCATGTTTCAACAGCTATATATTT 872064 32 100.0 34 ................................ GCTTGGATTTATGTTAATGTAGATACCCTTAAAA 872130 32 96.9 34 ...................T............ CTGCGTAATACACTTTAATCTTCGTTCCCTCTTC 872196 32 100.0 35 ................................ CAGTGGGCATCCCTTATCCGTCATCCTGGTCGCAA 872263 32 100.0 34 ................................ TCCAACTCTCCTTCCTCATTTATGTGGTACCAGG 872329 32 100.0 34 ................................ CTATCAATATCAACCGTCACAAAAAGGATATGAC 872395 32 93.8 34 ...........C...........A........ TATCTGGGACAAGCCATGGATATTGTATGGGTTT 872461 32 84.4 34 ...A.......C.C......A..........C TGAGAATTGTTGTTTTCCCACATCCAGACTCTCC 872527 32 81.2 0 ...........C......CTT.AA........ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 96.4 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : ATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGTGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACGGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTGAGAATGCTGTATGGACTTATTTTATTAAGTAAACGTTATATTGAGTAAAAAAGAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTTGAGTTTATAATTTTAAGAGGATCATAAGTAAGGTGCGAATGTATTGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATAAAAATATGTGATGATATATTTGTGTAAAAGTTATATTTGGGGGTTAAATGGTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TTGCATGACTGGTACAGACTTTATTTATTGTATGTCAAAGTTTATATAACATCGTGTTGAGTTTGGAGGAATAACGATGCTTATGTTGTCACAATGCTTTGGAAAAATTGTAACATCCGAGAAAGCTTCCAATAGAAGATACTGTGGAGGCAATAACAGTTGTGTTGAAGCATTTTAAGGTAATTTATAGTATGAAAAAATAAGTATTTTGATTTAAACTAAAAAGTGTGCATAAATTATTTGTGTAAATATCTGAGTTATTTAAAGTATTATATGAGCCATGTTATAAAATATGGGAAGATCAAACAATTGTAGGAAGAGTATAGAAAAGGGATGAGTTATGGAACCTTCAAAAAAAGATTGGTTACTATATAGGGAAAAGATAGCAGGTTGGCAGGAAGCTTATATGGAAAAGCTAATAAAAGAATATGTCGATTATCTGAATGGTGACGAACCTGCATCTACAAAATTCTGGAGAATGGAAAAGCGTATCAAACAGG # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 875330-875691 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGH01000003.1 Eisenbergiella tayi strain NML 110608 BEI61_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 875330 32 100.0 34 ................................ CGGGGTAATGCCGACTTCGCTTCTGCCGCTGGAA 875396 32 100.0 33 ................................ AGGAAATATAGCATCCCGCCCCGGAGGTTACGA 875461 32 100.0 34 ................................ ATCTGATTATAGACTTTTTTATTACCTCCATCAA 875527 32 100.0 34 ................................ ACAACCTTTCTGGCCCCGTCCTCTATCTGCTTAA 875593 32 100.0 35 ................................ ATGTTATAATAACAACTGATAATATGACTTGTAGT 875660 32 96.9 0 ............................G... | ========== ====== ====== ====== ================================ =================================== ================== 6 32 99.5 34 GTCGAGACTTACGCAGCCTCGTGGATTGAAAT # Left flank : TTAATTAGCGTTATATCTGATAGATATAAACGAATATTTGATTGCTTATTACCTTTAAAAACAGAACTAAAAATAAATGTAATTATTTGTTTGATAAATATGGAGATTAATTTTATATGTTTAGGACAAACATACACGATATAGATATTTTTTAGTATACTGGGGATCATTTTCTTGATTTATCTATGTGGCTATTCAGTAATACCAAGTAAAAAGTATTATTTGTATCATTTATTATGTAATATGTGAGTAGAAAATAAAAATCAGTGTTATTTGTTTTATATAGTAAAAGCAAAAACAGTTTACAGTTTTAAGAGAGAGATAAACAAGGTGCGAATGTATAGTGCACATGAAATTACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTAAGGGTTTATCATATAAAGGTATGTAGAAATATTTGTGTAAAAGTTATATTTGTAGTCTAAATCTTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TATGGATATCAAATGATATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATAGAATATATGTTGAGAAAAGAAATGACCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTATACCAAAAGGCCATGTTGAGCCAGTTCATAAAGCTCTTGCTAAGCGCAGAAGAAGATGTACTATTCCATATAAAGATGAAAGAGGTTGAAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCAAATGATGATAAAGTTGATATTGCATTAGAAGAAAATGGCAGAATTATTAAAAGTATTCAAGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGTGATCTTATTCGTGACGATGTAGGCTCGG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGACTTACGCAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //