Array 1 125205-125054 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKJB010000001.1 Alcanivorax marinus strain SY10-13 SY10-13_ctg0005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125204 29 100.0 32 ............................. TTAGCGCAGCGTGTAATGAACTAAAAGATAGT 125143 29 100.0 32 ............................. AGAAGGCCCAGGCCGCCCAGGAAACCGGCGAC 125082 29 82.8 0 .....................G.ATG.T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 94.3 32 GTGTTCCCCACAGGCGTGGGGATGAACCG # Left flank : TGGTCTACCCCGAAGGCAACTTCATCGAATGCACCGCCGACACGCCATACTTCCAGATCGGCGAAACCAAGTACGGCAAACCGATCCTGGACCGGGTCATCGATTACGACACCGCCCTGGACGACGGCATCAAATGCGCGCTGATCAGCATCGACTCCACCATCCGCTCCAACCTGTCCGTGGGCCTGCCCCTGGACGTGCTGCGCTACCCCCGCGACAGCTTCAGCGACCAGGCCCACTTCAACGTGGACGAACACCACGAAGGTTTCCGCCAGCTCGGCGAAGCCTGGTCCCAGGGCCTTCGCGACGTCTTCCAGCGCATCCCCGACCTGACCTGGGAGTGAGTCCGTCGCCCGGGCGGCGACAGGGCGATGGGCCGCATCAACGAGCCCGCGAGGCCGAATCCGGCCTCCGTTTTCATCGGTTAACTTCTGATCAATTTGTTCGGTGGAATTTTCCGGCCTCGTTTTGTTCTTTTTAATCAATGAGATACATTTAGA # Right flank : GATTTGGGGCCTTTCAACGCCAGGGGATATGGCGGCTGAAGCCGCTCCTGCGGTGGGATGGAGTAGGGTAGGAGCGGCTTCAGCCGTAATGGTGGGCTTAGATGCGGGCCACGTTTTCCGCCAGGGCGAGGGCGGCGGTGAGGCCGGGGGATTCGATGCCGAGCAGGTTGATCAGGCCGTCCAGGCCGTGATCGCGATGATCCTGGATCAGGAAGTCCGGGTACGGCTCGCCGTGCATTCTCAGTTTCGGGCGCACGCCGGCGTAATCCGGGCGCAGGGCCCGTTTGGGGAGGGTTGGCCAGTATTGGCGGATTGCCTGTTCGAAGGCTGGCCGCCGCGCCGGGTCGACGTGGTAATCCGGCGTCGCGACCCATTCCACGTCCGGCCCGAAGCGGGCGCGACCGGCCAGGTCCAGGGTCAGGTGGACGCCCAGGCCATGTTCCTGGGGCAAGGGGTAGATCAGTCGTTCGCTGGGGGCGGGGCGGTTGAGGGTGAAGTAG # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //