Array 1 1587393-1582323 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026711.1 Acinetobacter baumannii strain AR_0063 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1587392 28 100.0 32 ............................ TGCAAATAATGAAGTCGTCTACAAGGTTCCGG 1587332 28 100.0 32 ............................ TATAACGATGTAAGCCGCATAGATATATGAGC 1587272 28 100.0 32 ............................ TTTTCAAGTGCTGTACTTTTCTAGAAAATCAT 1587212 28 100.0 32 ............................ AAACACTTTGTAAAGTGGGGGATGAGTATTTT 1587152 28 100.0 32 ............................ CATGTCAGCCATGATGGATGACCATTGACATA 1587092 28 100.0 32 ............................ ACTTTGGCAAATGTATCAGTCATGGTGCAATT 1587032 28 100.0 32 ............................ CACTTCAAAAGGATATCGCACCGTTTCTGTAT 1586972 28 100.0 32 ............................ TTTCATGAAGCTCGTAGAAATCGACTTTTCAC 1586912 28 100.0 32 ............................ AAACCATGTTCGCGTATGAGACAGAATGTTGC 1586852 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 1586792 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 1586732 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 1586672 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 1586612 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 1586552 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 1586492 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 1586432 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 1586372 28 100.0 32 ............................ AACTGCTAGTCAAGTCAGTAAAATGATTGTTA 1586312 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 1586252 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 1586192 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 1586132 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 1586072 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 1586012 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 1585952 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 1585892 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 1585832 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 1585770 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 1585710 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 1585650 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 1585590 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 1585530 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 1585470 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 1585410 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 1585350 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 1585290 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 1585230 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 1585170 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 1585110 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 1585050 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 1584990 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 1584930 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 1584870 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 1584810 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 1584750 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 1584690 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 1584630 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 1584570 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 1584510 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 1584450 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 1584390 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 1584330 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 1584270 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 1584210 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 1584150 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 1584090 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 1584030 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 1583970 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 1583910 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 1583850 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 1583790 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 1583730 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 1583670 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 1583610 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 1583550 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 1583490 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 1583430 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 1583370 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 1583310 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 1583250 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 1583190 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 1583130 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 1583070 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 1583010 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 1582950 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 1582890 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 1582830 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 1582770 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 1582710 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 1582650 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 1582590 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 1582530 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 1582470 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 1582410 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 1582350 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 85 28 94.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1592483-1595205 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026711.1 Acinetobacter baumannii strain AR_0063 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1592483 28 100.0 32 ............................ TCAAGTAGTTCCAGCTACTCAGAGTGAAGATG 1592543 28 100.0 32 ............................ GATATGTGTAGAGAAGGTTTAGACCCTGAGTT 1592603 28 100.0 32 ............................ TGTATTTGGGTCTGTTTGGTCTTTTGTAGCTT 1592663 28 100.0 32 ............................ TCAAAACTCGATTTTAGTGGTTGAGCTGTATC 1592723 28 100.0 32 ............................ ACTGGCCACGCTAAAACAAGCGTTCCCCAAAG 1592783 28 100.0 32 ............................ CTGATGGAGGTAACTGTGGATGACCTGTGGCC 1592843 28 100.0 32 ............................ TTAAGTGATGTTTTACGTGGACGTTTTGATGA 1592903 28 100.0 32 ............................ TTTAATCGCAACCATGACAAGTAGATATGCAG 1592963 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 1593023 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 1593083 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 1593143 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 1593203 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 1593263 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 1593323 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 1593383 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 1593443 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 1593503 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 1593563 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 1593623 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 1593683 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1593743 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1593803 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 1593863 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 1593923 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 1593983 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 1594043 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 1594103 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 1594163 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 1594223 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 1594283 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 1594343 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 1594403 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 1594463 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 1594523 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 1594583 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 1594643 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1594703 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1594763 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1594823 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1594883 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1594943 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1595003 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1595058 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1595118 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1595179 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 46 28 98.8 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //