Array 1 2907335-2906405 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073060.1 Acinetobacter baumannii strain DETAB-P39 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2907334 28 92.9 32 ...C........T............... ATAATCTTATAGGTGTCACGGCCATTAGGTTT A,A [2907328,2907332] 2907272 28 85.7 32 ....C.....AT.C.............. TAGCCCTTCGGCTTGATGATTATTGAGTCTTT 2907212 28 92.9 32 ...A...............G........ TATCGTGTATTTGATTCTAAAAAGAAAGTGAA 2907152 28 89.3 32 ...A........CC.............. AAACTCACGAATAAACTGTTCTGGTTTCATTG 2907092 28 96.4 32 ...A........................ TGCGCCAGTCGGTGCCGTACCTAAATTTACTG 2907032 28 100.0 32 ............................ ATCAAAAGCTTGGTGAAGAGCATGGTGCACTA 2906972 28 100.0 32 ............................ TTCAATTGTGAAGTCTTTGCCCAGTAATGAAG 2906912 28 96.4 32 ...A........................ AGAACAGTTTATTCGCGAATTCGGGGTGGAGA 2906852 28 96.4 33 ...A........................ CAACCGGCTAAGCTGCATGTTCTTGAGGCGCTG 2906791 28 100.0 32 ............................ GATAACGAACACACGGCGGCGTCGTTGTGGAA 2906731 28 100.0 32 ............................ ATACAGGACGGCTGGCAAGTGGACGGGCATGA 2906671 28 100.0 32 ............................ AGTGGGATTGTTGCAAAAAGGATTCGCTTTCT 2906611 28 100.0 32 ............................ ACGAAACTAAGCGGCTCATTACCGGCGATAAC 2906551 28 100.0 32 ............................ TTGATAATACGACCTATGAAATGATTGGTACT 2906491 28 100.0 31 ............................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 2906432 27 78.6 0 A..T........TC........C.-... | A [2906428] ========== ====== ====== ====== ============================ ================================= ================== 16 28 95.5 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TCTTGCTGCTAAAACTGCGCTAAAGCAATTCAAATGCTCACCTAAATCTACTCTGTTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTGTGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGATTTTATTCCTCACAAATCATAATGATTGAAAGTAGACCTACGCTTTGCTGTATAGCAGTATGAGACAAAAGTTTAAAATGTTGTGCTATCATTTGGATAGTCCTTCTTTAAGTTATAGAGCTTTGGAAACGGACAAAAGCAGATATGAAGTTTTCGACGGCTAAGTATCTGCTTTTTTATGTTCATTTAGTATTCAAAATATATAGTTTTAATATGTAAGTCAAATAAAATATATATATAACTATTAAGGGATATACTTTACTGATTTCAATTAAGAGTTATACTAAATGCTTAATCCATCAACTGAGATGGTTGAGAAATTAATAGTTATTATTAATTTTTAT # Right flank : TTTCTCTTTCAAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCAGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTAGGGGCAAAGCATAAATTTGCAAACGATGGTGCATATCCAGTTGCATCGACCAAAAAACAACAAAAACTACTAATGCTAGATGAATGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGGGACATGCATGATATCGGTAAGGCCT # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2912886-2915314 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073060.1 Acinetobacter baumannii strain DETAB-P39 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 2912886 29 96.6 31 ............................C TAAACGTTTACCACTTGCAGTTGTTGTTACT 2912946 29 96.6 31 ............................T ACAAGGCCAATTGGCGTGATTAAATCGCTTA 2913006 29 96.6 31 ............................C AAAACACCCAACAAAGCGGTGCCGAGAACAT 2913066 29 100.0 31 ............................. AGCAGAACAGGCCGCTAAAGCACTTGCGGAT 2913126 29 96.6 31 ............................T CTTTACCATCAGCCGTTTTGCCTGACTTACC 2913186 29 96.6 31 ............................T CGCTCGGAAATGGCAGACGCTTATACAATAT 2913246 29 96.6 31 ............................G TGATTTTTGTGTTTGCTCTGATCGGTAAAGT 2913306 29 100.0 31 ............................. GATGGCACTACCAGAGCTACTGATTTAGATC 2913366 29 96.6 31 ............................T GAACGTCAGATCTTTGCTGACATCGAGGGGC 2913426 29 96.6 31 ............................T TCAATTATTTATTCAAAAGATAACTGGTTCT 2913486 29 100.0 31 ............................. ATAACGAAACCGATAGAAAGCTTTAATTTGA 2913546 29 100.0 31 ............................. ATGCAGCTTTTCGAAAAGTTCATTGTGTTCA 2913606 29 96.6 31 ............................C GCAGATTTACGGATGCCTGTAACTGTCATAA 2913666 29 96.6 31 ............................C TTAGTTGTGGCGGCGCGTCAATTGGCTCGTA 2913726 29 100.0 31 ............................. TTTTCGGTAAACGGCGCTGCTAACGCCGTTC 2913786 29 96.6 31 ............................G CTTTGGTACGGTTATTTGTGCAAAGGATGAA 2913846 29 100.0 31 ............................. GTTGCATGGGGTATAAAAGTTACATCTAGGC 2913906 29 100.0 31 ............................. ATTAGGCACAAGACAGGAATCGGAAGCCCTA 2913966 29 100.0 31 ............................. AACAGCTCGACGCGCAATATGAGTTACATGC 2914026 29 100.0 31 ............................. AATTGGTATGAAGAGCCAGTTTCGCAGTTCA 2914086 29 96.6 31 ............................T AAGCCTAAATTTCCGTTTGCTCCGGCAGACA 2914146 29 96.6 31 ............................T TTGATGCGGCACCTGAGTCAGAATTACTGGT 2914206 29 100.0 31 ............................. CAACTGGCTCGACATGTTGATCAATCATATC 2914266 29 96.6 31 ............................T AGCACATTAAATATAGTTTTTGATAATCAAT 2914326 29 96.6 31 ............................T TCAGGGATTTCAAAAGCTAAGCCGGTTCCAA 2914386 29 100.0 31 ............................. GATGTCGTAGAAATTCTTTTGAATCCTGATC 2914446 29 100.0 31 ............................. GCATAGTGAGCTATTGCAGCCGCTTTAGAGT 2914506 29 96.6 31 ............................T GCAAATAATCGCGTAAAATATTATCCGGACC 2914566 29 100.0 31 ............................. ATTGGAGTAATTAAATCGCCTAGATCAGAAG 2914626 29 100.0 31 ............................. CAGTATCACTGGCACGATTTATGTAATTAAA 2914686 29 100.0 31 ............................. TCTGCTGTAGTCGTACTAACCACGCTACCGT 2914746 29 100.0 31 ............................. ATATTGTTATTCAATCACCGTAATAAGAAGG 2914806 29 96.6 31 ............................T ATCAATTAGGCACAAGAGAAGAATCGGAAGT 2914866 29 96.6 31 ............................T TATCCTGGTAAAACAAGCCCATATCTTGAAC 2914926 29 96.6 31 ............................T GGTGAATATATTATTAATATGGGCCATTATC 2914986 29 100.0 31 ............................. ATTGGAGTAATTAAATCGCCTAGATCAGAAG 2915046 29 96.6 31 ............................T GAATTCTCTCATCTGGCAAAGACATTAAACT 2915106 29 96.6 31 ............................C TGATTTATACCACGTTTACGCACTTTAGCTT 2915166 29 96.6 31 ............................T TGAATCGTGGAAATTAATAAAACCATGTAAA 2915226 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTGTTG 2915286 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 41 29 97.7 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAATAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGAACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //