Array 1 83847-81718 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJRZ01000010.1 Xanthomonas fragariae LMG 25863 Contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 83846 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 83786 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 83725 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 83665 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 83605 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 83545 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 83485 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 83425 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 83365 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 83305 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 83245 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 83185 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 83125 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 83065 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 83005 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 82945 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 82885 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 82825 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 82765 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 82705 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 82645 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 82585 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 82525 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 82465 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 82405 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 82345 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 82285 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 82225 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 82165 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 82105 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 82045 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 81985 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 81925 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 81865 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 81805 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 81745 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //