Array 1 2754819-2757165 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFZJ010000001.1 Methylocystis sp. WRRC1 000000F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2754819 29 100.0 32 ............................. GTTTTCGCATTCAACTTCATCGCGCTTGTAAC 2754880 29 100.0 32 ............................. ATGCCGCCCCGGCCGCTTACCACGCGCCATAT 2754941 29 100.0 32 ............................. TTTTTGTGCAGCTGCACCTGCGCGCCGATCGC 2755002 29 100.0 32 ............................. TCAGCAGGGTTTCTTGGACGGCTTCGCCTTCG 2755063 29 100.0 32 ............................. AGAAATTCCCTCCACAGGGCATTTTTTAGATT 2755124 29 100.0 32 ............................. ATGCCGGATGACGAATTGGCCTATCTGCTCGC 2755185 29 100.0 32 ............................. GTCCGCAATGAGCATTGAAACATTCCCCGTCA 2755246 29 100.0 32 ............................. AACAATGCTTCCGTGCGCTGGCGATCGTTCAT 2755307 29 100.0 32 ............................. GAGGGCCAAATTGCCGCTTCAGCGCAGCGGCA 2755368 29 100.0 32 ............................. AACGCGGGCTGTCCCAGGCCGCGTTGGCTAAA 2755429 29 100.0 32 ............................. CTTCCTGCGCGCCTTCGTCGATAACGATCTAC 2755490 29 100.0 32 ............................. ATAGTGGCTTGAAAGCAGCAGGATGACCAAAC 2755551 29 100.0 32 ............................. GCGGGACTCCGAAAAAGCGTCGCCAAGACCTT 2755612 29 100.0 32 ............................. TTCACCGCGCCGCGCTCGCGTCGCTGCGAAAA 2755673 29 100.0 32 ............................. ACAGATGTGGCAAACGCCGTCCGCAGCCGTGA 2755734 29 100.0 32 ............................. GACAAGCGCAAGATGCGCGCAATCGCCGTCCC 2755795 29 100.0 32 ............................. GCGAGTTTCGCCGCATCGACGACATCGGCCGC 2755856 29 100.0 32 ............................. CGGGAGGCGGAATACGGCGTTACGGCCGTATT 2755917 29 100.0 32 ............................. GTCTATGCAACCGCCTTCGCCGGCGCGAAACA 2755978 29 100.0 32 ............................. GAAATAGTAACTGGCTCATACGGCGCAATCGA 2756039 29 100.0 32 ............................. CGCGCGCCGCGATGGCGGCCGACGGCTTCAGC 2756100 29 100.0 32 ............................. GATTTCGCGGCTTTAGATAGCGCGTCGCCTAA 2756161 29 100.0 31 ............................. AAGTGGACCCTGCCCGAGTTGGCGTCGGCGC T [2756189] 2756222 29 100.0 32 ............................. TGTGACCGTGCTTGTGTCATAGGCTGTCGCTT 2756283 29 100.0 32 ............................. ACGTTTTCCGGCGACAGAAAACGCCTGACATG 2756344 29 100.0 32 ............................. CAATGGCTCGACATGTGACGGCGCTCGATCGG 2756405 29 100.0 32 ............................. CGTAAAGAGCGGGCCAAAGATAGCGACTGTCG 2756466 29 100.0 32 ............................. GAAGCTGGTTCGTTCAAGTTCGACAAGGACAA 2756527 29 100.0 32 ............................. TGGGAAGGCGCGGACTGGCTACCACAAATCCT 2756588 29 100.0 32 ............................. GCCTACGCCTCCGGCAAGCTTCAGGCCGTCGT 2756649 29 100.0 32 ............................. CCGCCCTATCTGAAGCCCAAGCACGCCGTCGA 2756710 29 100.0 32 ............................. AGATGGCGGCTATGGACGCCGCTGCAAATCTC 2756771 29 100.0 32 ............................. CCCAAATTCCGCGTATGGGCTGATCGGAAGCG 2756832 29 100.0 32 ............................. AACCGCGCGGCCGAGCCGGAGTCGTTATGACC 2756893 29 100.0 32 ............................. AACGCCACGTCGGCGCGCGTCATCGTCACGGT 2756954 29 96.6 32 ................T............ CGACGGACATGTTGGAGGGCGTCGCCGAAGAA 2757015 29 96.6 32 .......T..................... ACGTTTTTCACCTTCGCGGCTTTTCAACGGAT 2757076 29 96.6 32 .........A................... AACCTCGGCGCGACGCTTGACCGCGCCGGCGA 2757137 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.7 32 GCGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GATCCCCTCCATAGAGGAGGCGCTTGCCGCCGGAGGCATTGAAAAACCTTCACCGCCGGACGACTCGGTCGGACCGGCTTTCCCGGACAAGGAGCCCAGTGGTGATGCTGGTCATCGTGGTTGAAAACGCGCCGCCAAGATTGCGCGGACGACTGGCAGTCTGGTTCATCGAGGCGCGAGCCGGGGTCTACGTGGGCGTATATTCCCGCCGCACGTGCGAGATGATCTGGAACGAAGTTCAGGGTGCGATCGGCGACGGAAACGCGGTGATGGCCTTTGCCGCTCCCAACGATGCGGGCTTCGTCATCGAGACCTGTGGCGCCAACCGCCGCATTCCGGTTGATCTGGACGGATTTACACTGATGAGTTTCCTGCCGTCCCCAAAACCAACGGAATGAGCGCCGTAAAACGCCGATAGAAACTGACCGGAACAGAATTGGAACGCCGGTGCGTTGTTTGACATCGTGAAGAGAAAATAAGATCAAACGCTTCTGGGAAGA # Right flank : GATGCTCGTCGACGGTTCCTGGTCCTCCGCGACGTATTCCCGCATGCGCTCCCCTCCCGGTTTGTCCGGAAGACGCTGGGGCCTCAACTAGTCTCAAATAGTCCATTTGCGAAACATGTCTCAATTACTTTACTTTTTGCGGTCCGGGCCTCGCCATGCTAGCGTTTCTCCGCAATGAAGCCGAGCCTGCTGCGCCTTGTCATCTCCGCGATGGTTGTCGTCGCCGCCCTGTCAGGGTCGGCGTCCGGCATTGCTGCGTCCTCGGTCCACGACTGCGCCTCAATTTCTCTCATGAACGATTGCCCCGATCATGCGGACGACAATGCGACTGCGCCTCGGCATTGCGATTCGCTCGTTTGTGGCGCTCTCCAGCTCACGTCTATCGAAGCGCAAACGCCGACGACACTGACTGGGGTCGGTTCCGTCCGCCTTATATTGAGCGACGCGGCGCATCCGGGGCTTTCGGCGCCGCCCCACCTTCGTCCTCCCATTCTGTGACG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //