Array 1 33-366 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABXY01000010.1 Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 strain DSM 16992 B_catenulatum-1.0_Cont16.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33 29 100.0 32 ............................. AAGTCTTCGATGGATTCTTCATTATTGTCACC 94 29 100.0 32 ............................. AAGTCTTCGATGGATTCTTCATTATTGTCACC 155 29 100.0 32 ............................. AGACGGACGCGCCGCGCATTGTGTTTGACTGG 216 29 100.0 32 ............................. AATAAAATACCACATATCAAGACTCCTTTGCA 277 29 100.0 32 ............................. CGCCTTGTACACGAACCCGACGACGCCGGAAG 338 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 GTGTTCCCCGCATACGCGGGGATGATCCC # Left flank : TGCACCATGAGCAAGTACGGGTTGCCGGTAAGG # Right flank : CTCATAGTTGAATACACCAATATCGCCATCCAGCTTGCCGATGATTACTACCATCGTGTGCGCCAGTCATGGGCCAATCATGCCGGAGTGAGCCTTCCGGCACTCGAACGATACGGGTTCACTGACGTCGACCGGGTACTATGGGCCATGAGGGGCGGCTTGGCCAACACCGACTGGAACGGTCTGAAATACCGGGACGTGAAAACCGGAAACAGCAAGGCCGTCATCACCATGAGTGACTTATGGCCAAACCTGGCCAATCCGGACGACGCCCAACAATTCATAGTCGATATGATGCGCAATGCGCTACGCCTGCAGACACAGCGTAACATTCGGCTGGATCCGAGCAATCCACGATGAGCCCGAGTGCCGCAGGGCAGGACGTGCGCTTTTTGCGCGATGCTCGCCTCGCGAGGATTCGCATACACCAGCCAGGAGGTCGCAGGCGGCGAGGGCAACGCATTCCACCACGATTGCGATTGCCGCATCATCCCGACATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 77885-78402 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABXY01000009.1 Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 strain DSM 16992 B_catenulatum-1.0_Cont14.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 77885 29 100.0 32 ............................. GGACGTATGGTGTGTGTTTGCGGTAGTCTTTT 77946 29 100.0 32 ............................. AATCGGAAAACCCACACTCCCGACAACGGTTA 78007 29 96.6 32 ............................T TGAGCCTGTGCGTAAGCATTGTTAATGCCCAT 78068 29 96.6 32 ............................T AGGTGTTTTATCACCATGTCTCAGATATGCCA 78129 29 100.0 32 ............................. CGTACCTTAGCCATACTTCTCCGATGGCTTGC 78190 29 100.0 32 ............................. GGTATTTTACGACGGTTCAGCCGTTTTCGTAC 78251 29 100.0 32 ............................. GCGCACACGCACGCCAACACGCTACGCCACAT 78312 29 96.6 32 ............................T ATACGGGACCTCAAGCCGCCTCTGATGATTGG C [78321] 78374 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.9 32 GTGTTCCCCGCATACGCGGGGATGATCCC # Left flank : AGGATCATGTCGGCCTGTGGGATGAACGGTTGGGAGAAGTGTCTGCAGGGAAATCCTATGCCGATGATGAGTGGGGATATGAGGAATGGTAGTTATTGTTTTAACGGCATGCCCGGTGGGTTTGCGCGGTGACCTTACTCGGTGGCTATTGGAAATATCGCCAGGTGTGTTTGTGGGACATTTGGATGCACGTGTTCGTGAAAAACTGTGGGAGCGAATCGTTGAACTTTCAAAAAACGGTCGTGCCATTATGGTTTATTCGGCTCGAAATGAGCAACATCTTGCTTTTAAAGTGCATGGAGCTGAATGGTCTCCGACAGACTGTGAAGGCTTAGAGCTTGTAAAACGTCCTTCTGGCCCAAAGGAAGTGTCGTTTGGTGGTGCTCTTCACCGTGGATGGAGTAATGCCAGTAAGTATCGGCAGGCGAAGAAGTATTCAAACTAAATGAAAAACGAATGACATGAATTCAAAAACCGCGAAATTATGCTAGTCTCTTAGA # Right flank : GGTCAACAGTGTTGTAAAACTCGCTGAAGCTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //