Array 1 9116-8886 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMEB01000118.1 Brasilonema bromeliae SPC951 NODE_1816_length_18124_cov_4.557474, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 9115 26 96.2 40 .........G................ TTTATCAGTTTGTGAAGAAGATGCAGACTGCCTGACAACA 9049 26 100.0 40 .......................... TTTATCAGTTTGTGAAGAAGATGCAGACTGTCTTATCATC 8983 26 100.0 43 .......................... AAGATTTGCTTGTGGTGCAGGCGTCGTATTCTGCATCACAATC 8914 26 96.2 0 ......C................... | C,GC [8902,8904] ========== ====== ====== ====== ========================== =========================================== ================== 4 26 98.1 41 ACCCGTTGCTGTGATGTTTGTTGTTC # Left flank : CTAACTGCTCTTCTTGTCACATAGGTGGTGGTAACATCCTTATTAGCGAAAAAACTTTGAAAAAGGAAGCTTTATCAAAGTACCTGGAGGATTATGATGCAGACTCAATTCAAGCGATTATTTACCAGGTGCAAAATGGTAAGAATGCTATGCCCGCATTCAAGAATAAGTTAAGTGAACAGGAGATTATAGAGGTAGCTGCTTACATTTTCCAAAAAGCAGAACTAGGCTGGCAAGATAGCTAAAAATAGAAAAAGAAAACCCTCTGGTGTTCCGGAGGGTTTTTTATTGATGACAAGCAAGATAAGGAACTTTAGTTGAGTGATGACTGTTTTTATTTTTCCTGATTATTGCCTTGTCTTGTATCTCTAATTTGACGCAACTGTTGTAGTAATTTTTGGCTGTTTTGACCAGAAGCAGAAGATTGATTGCTATTGACTTCTTGTTGAGAAGTTTGTTCAAGATTCGCTTGTTGTGGTGACGTAGTTTGCTTGACAACA # Right flank : AAGATTTGCTTGTGGTGCAGACTCAGTTTGGCTTTGGGATTGCTTCATCGATGATGAACCAGAACGCTGAACCAGGTTAACTTTTTGCGGTTCTTTGGATGGTTGTAAATTGACCCTGTCGGGACGCAAACCCTGAGTCATCTCAATTTTTTGTGGTTCTTTGGATGGTAGTGAGGTGACTGGAACTGAGCGCAAACGTTGAATTAAGCTGCGTTGTGCTATAGTTACTGGTTGTGTTTGATTGACTCGAGATGAGGTTGACAGTTCTGATGCGGGAGTTTTAGAAATATCGCTGTTAGGCTTGAACGAAATGTTAAATGGGTAAAACTTTGGCTTGCCATTTGCCTGGACAGGATTTTTTTGGAAATATTCTCTGAAATATTGCCTAACAGATGTTTTCAACTCCGATGGAACAGAATTATTGTGGAAATCTATCGACTCTACTTGACCTTCACGATTGATTACCAAATCACCTTCAACATTGCCTTGTTGTCCTGTTT # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCCGTTGCTGTGATGTTTGTTGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 10306-9905 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMEB01000166.1 Brasilonema bromeliae SPC951 NODE_2308_length_14598_cov_4.917899, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 10305 36 100.0 38 .................................... GTCGATGTCGCAGCTGGTGCTACTGTCTGACTGGTTGT 10231 36 100.0 34 .................................... AACTTCAGCGGATGAAAAGCCAAAGTTTGGAATT 10161 36 100.0 36 .................................... GTAAGAGCACCCATTTCTTCGACAATCTGACGTGTG 10089 36 75.0 36 .......AT..TTA.....C.T..G.T......... ATCATCAGACGGGTATTCAAATGTTTCCAAAATTTC 10017 36 75.0 41 .......AC...TC.C...C.TC.G........... ATTTATCTACCACGGTGCGGTTTTGGCATTACTGGCACTTG 9940 36 75.0 0 .......AC...TC.....C.TC.G......A.... | ========== ====== ====== ====== ==================================== ========================================= ================== 6 36 87.5 37 CTTTACAGAACCCTTTCCCTGCAAAGGGATGGAAAC # Left flank : ATCAGTTTGAAGAAGAATTCAGCAATTGGTGAATTCAGTATTCAGAAGGAAGAAATAAAGAATTGCGACTCCTGTACGGGCGCAATGCCTTGCGCCCCTACTGACTCCTGACTCCTGACTCCTGACTCCTTCACTGTTTACTGTTCACTGTTCACTGTTCACTGTTTTAACAAACCATGATAAAACAACAAACCAGTTGCTGAGTGTTGAGTACAGAGGAACCACTGCACTTTTGAGTGTGGAGTTGGTCAAAAACTTGACAATTATAGGTGAGACATTCTATTTTTAGAAGAGTGTGTTGAACTTCATCGACACCACTCCCCCGATCCTTGAAAACCGCATAACTTCGTTGAGTGGTGTCGATTGCTTGTATAGCAAGGTTTCCAGCTTACAAGATGACCTAATTATTGAGAATAATCTGGCGATTATTGACAATCAAAAAAGTGGTGTCGATTTGGGGGTCTCAAACCCTCTCCCAGTAAGGGTTCTACAAGTGAACT # Right flank : GACCTATGCCGCTAATTCGATTGTTAAAACTCACTGCTCAAACTGAGATCTTGCACTTGTGCCAACAACCGCCTAGGGTTTAAACCCTAGTCTCATAGTAAAAGTCGTCTAAAGACGACTGCATAAGCTTTTGAGTCTACTTTAGTAGACTTGAACTGTGAGCCTGGGAATTGATTCCCAGGCGGACGAGGTTGTGTTCTTGAGAATGGTGCAAGATCTCAGCGTTTTTGATAATACCAATTTGAAAAAAGAATGCGACTGATACACATTCCCAAACCCTTGTTATCTTAGGCTTTCTTCATTTTGAGATTGCTTCGCTTCGCTCGCAACGCTGAGCCCTTCGGGCACGCTGCGCGAACGCGATTTTGAATTTTGAATTGGTATAACCTCTTCCCCCAACGGGGATCAAAACCGGAATCAGCGTCAAAAAGTTACATAGGTGTGCTTGTGTAAACGCAGTTGTAGAGTTATTTATGATTGTGAGATTCAAAATTTGTTTA # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.38, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACAGAACCCTTTCCCTGCAAAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.30,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 10564-10303 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMEB01000211.1 Brasilonema bromeliae SPC951 NODE_2767_length_12257_cov_4.855106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 10563 37 94.6 38 ....T......................T......... AACTTGTAATATTCTTTTTAACCTAATAGAAATATTAG A [10561] 10487 37 97.3 36 ...........................T......... GTCACAGTATGGACAGTTTGACGAGCCCACTCCAAT 10414 37 100.0 38 ..................................... CAGTACTAATTAACAGTTAGTATACAAGACAAGTAGTA 10339 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 98.0 38 GTTTCCATCCCCGTTAGGGGAAGAGGTAATGGAAAGA # Left flank : TAGCCTTGGCTGCAATAGCTAAGGTTATAGAAGGTGCTACTTGACTTACTCGTTGCGCCAGCTTCATGTCACTCGTTTGGCAAACTTCTGACTTACTTTACAATATCTCAGAAAATAAGATTGATATTTGTCTCTTAACAATTCCTTTGTTGAAAGAATAAAATTGATGGGGCGTTAAGCGTAGCTCTGCCGTAGGCAATCGCTTCGCTGTTTGTTATCTCTCAGATGAACTGTGGATGGTGGATACAGAGAGTAAATGTGTTTTTTTGTGATTTTTTCTCTACGTAATTTTCTACTCAACGACCAACCCCCACAAATAGAAAAATCCCAGCATCCCTACCAACTTAAGCGGCATTATTAAGTGTGGGGGATGACTTGGGAATTCTTGAGCAACTAACTGTAGGAACTAAAAATCGCAAGGTGTTTAAGCCTCAGATTTAGTTTTCCCATCGGAAATTTTCTCGCTCATTCAATAATTCGGAATTTGATACAAAGATTTG # Right flank : GTTCGCTTAGGGAGCCTTACTGGGAGGGGATTTGGGACGCCAAATCGACACCACTTTTTTAATTATCAATAAGGGCAAGATTATTTGCAATAAACTCTTCATCTTGTAGGCTGAAACCCTTACTACAAGAGCAATCGACACCACTAAACGGAATTATGCGGTTTTCAAGGATCGGGGGACTGGTGTCGATGAGTTTCAACACACTCCCTCAAACATAGAATGTATGACCTATGGTTGTCAAGTTTTTTACATTTCACATTCTCAATTGCTTAGTCATCATCTCCACGCTGCGCTTTGTTACGAGCAAATTCTTGTTCAATTGGGCTACGCTCATGTGGGTTACGATCATAGTATCTTGCCCCAAAAGCTCGTTGAGACTGGTCATTTCCTACTTCTTCGCCAGACCGACATATGACTTGATACTTTTGACTTGTTTTGCCCCTACACCCCTGTGTTTGTTGAAAGGTAAACTGCAATGCTACAAACTATTGAAGGAATAT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTTAGGGGAAGAGGTAATGGAAAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 5237-7306 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMEB01000062.1 Brasilonema bromeliae SPC951 NODE_1197_length_25215_cov_5.311526, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 5237 37 100.0 34 ..................................... AACATTGATCCTAGTGACCCTGAAAAGGGCATCA 5308 37 100.0 37 ..................................... TGGAACCAGAACAAAACTAAACGAATTGCATATGAGA 5382 37 100.0 37 ..................................... AAGGAAGATGAATTATTGACTTATAGCATGTTTCATC 5456 37 100.0 35 ..................................... TTAAAAGTCAATGGTCCAGCATCAATAATTGTGGC 5528 37 100.0 35 ..................................... CGCGCGTACAACAATCGTGAAAAAAAGAAAATAGA 5600 37 100.0 35 ..................................... TTACATTCCAGTTACCGTAGAGGAGGCGATCGCGA 5672 37 100.0 36 ..................................... GATTTGGAATATTGCTCAGTACATATATCAAGAGCA 5745 37 100.0 35 ..................................... AAATTGTTTCTAGATCTACACCTTTTTCCGCCCAA 5817 37 100.0 37 ..................................... AGCTAACAAAGATGGGTTTCAAGGTTTGCGGTTTCCT 5891 37 100.0 36 ..................................... TTTTCAACATAAAACACCACATTAGTAATACTGTTG 5964 37 100.0 34 ..................................... TGCTAGATGATACAGGAAATGAAAGGGAAGACAT 6035 37 100.0 34 ..................................... TTGAGGGTATTAGTGGCGCGACCAAACCCCAAGG 6106 37 100.0 36 ..................................... AGGTAGTACCCATACATATTGATAGGGTTTGAACAG 6179 37 100.0 33 ..................................... AATATCTGAGAATTCAGTAAATGCAGAAATCAA 6249 37 100.0 34 ..................................... ACGGTTTATACACATTTGAAATTTCTAAAATTCC 6320 37 100.0 36 ..................................... TCTATACCTTCACATTGCACCCATTTACCATTTACA 6393 37 100.0 35 ..................................... TAAAGTCAAGGTCAAAAAGCGCAATTCAACCATGA 6465 37 100.0 35 ..................................... AAGTTCGCTCTTGTGGTTAACTCTCCTGCTGTATA 6537 37 100.0 35 ..................................... AGGCTTCTAAAACTGTCTACTAAGGAAGAAACCAA 6609 37 100.0 35 ..................................... GTAAGCAGTTTCTGTGTGTCAATTCTAAGTAATTA 6681 37 97.3 38 ...............T..................... TCAATGAGGTAGACCGAGTATGTATGCTATGGCTTCAG 6756 37 97.3 35 ...............T..................... ATGAAGTCTGAGAAATTTGGAGTATCTATAGTAGA 6828 37 97.3 37 ...............T..................... AATGCCGTACTCAGCACAATTTGAAATATCAACACAT 6902 37 97.3 35 ...............T..................... AGATCCACCAAGTCCATCAAACGCGCACGGATGTG 6974 37 97.3 36 ...............T..................... TAATTGGGATTGCTGCAAAGTTTATCCAACTGCCAG 7047 37 97.3 38 ...............T..................... GAAAGGATGATCGTATTTAAAGTTTTCAAATTTGCACC 7122 37 97.3 36 ...............T..................... GAACATCCTGTTGCGGCAGTCGATAAACCTGTTGTT 7195 37 97.3 38 ...............T..................... CAGCGATCGCCCCTATCGCCATCCCCTCCGGCACATCC 7270 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 29 37 99.3 36 GTTGAAATTTCTCTTACTCCCTATTAGGGATTGAAAC # Left flank : ATGAATGTTGTTGTGTCTTACGATATTTCTGAAGATAAGCGCCGTACAAAAATCCACAAAGTCCTCAAGTCTTATGGGCAGTGGGTGCAGTATAGTGTATTTGAGTGCCAGCTGAGTGATACTCAATATGCAAAGTTGCGATCGCGCTTGCACAAACTCATTAAGCCTGATACTGATAGTATCAAGTTTTATTTTCTGTGCGCCTGCTGTTTTGGTAAAGTCGAACGTATCGGCGGCGAACCACCTCGCGATGACACCATTTTCTTTGCCGAATGCGCGGATGGGTAGGTGTTGGAAAATAGGTTTTGAAAAAAATGGCTGGATTGCTTACAGGACGAGGATTTCTGGGGAAAATTGTTTATAACCATCCGCGCTCCTTGCCTAGACTGGATTTCAGCCATTTCCTGTCAATCAATTTACTTTTTTGCATGCTATCATTAGATCACCCGCGATTTAGAACCTTGAAAACTTTATATAGAGCAGGTCTCAGACTTGGATCG # Right flank : CTAACGGGATTGAAACAGGCGATTTCTATGGAAAGCTTTTCTTCTCCTGTCGCAGACACTGCGCGCCGAGAGTTCCTGTCTGCAGGACTTACGCTAATGCTCAACTACGACAGCGTTAAAATAAACCCATAAATCGTAACGCCATACCCACTCGCCATGTCCCTAGCTAAGGAATTAGACACTCCCCAAGATATCCCAGAAGATGTTATCCTTCCTCCAGGTGATTTATACAGCGACGAGCCTCCCTTGGAAACCGAACTACATCTACGGCAAATAATCCTACTTTTCAAATGCCTGGAATGGTTGTGGCGAGATAAAACAGATTTCTACGCTGCTGGCAATCTTACTATTTATTACAGCCTCAGCAAACGCAAATCAGAAGACTTCCGAGGACCAGATTTTTTTGTCGTGTTGGACACCGAACGCAAAACTCGTAAAAGTTGGGTAGTTTGGGAAGAAGAGGGCAAATATCCGAATGTAATTCTAGAAATTCTTTCTGA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCTCTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : GTTGAAATTTCTCTTTCTCCCTATTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 13881-14062 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMEB01000005.1 Brasilonema bromeliae SPC951 NODE_328_length_57545_cov_4.746199, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 13881 36 100.0 37 .................................... TCTACTGTAACGTCTACCAATTCTGAATATTGGGCTT 13954 36 100.0 37 .................................... GCTTGAAAATAATACTTCATTGTTTTGAAGTACCAGA 14027 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 100.0 38 GTTTCCATCCCCGTTAGGGGCGATGTAAGTGGAAAG # Left flank : CTAGTCCATCCTCTGCTTTCAACCAGCCTCTCAAAATATTCTTGTCTGGATCGTAGATGTAATATTCCTGAACTCCGTAGCGATCGTAAAATAAAAGCTTTTTGTCCATCTCAGTAGAACTGTTACTGGGAGAGAGAATTTCAAAGACGACTTGCGGCGGAATGTTGTCTTCTTCCCATTGTTTATATGAAGTGCGATCGCCCTTTGTTCTGCCAAGCACTACCATCACGTCTGGTGCTGTGACAATCGTATTTCGACCTTTTAGTGGATACCATAACAAGTCCCCAGCCACAAAGACATTTGGATCATCAGCGTACAGCCAATCAAGATTTTGCTGAATCTGCACAATCCAACGGAACTGCTTGGTATTATCTGCCATTGGCTTGCCGTCGCTTTCTGGGTAAATAATTTCTGATGGAGTTGTTGCCAGGGGTTGAGAAACCATAACCAAGCTTATGACTCTGGATGCTTCAAAGTTAGCACAATATGGCATTAGTAAT # Right flank : GAGTTCACTTCTGGAAGCCTTACTGGGAGAGGGTTTTAGATACCCCAATCGACGTACTCCTAAAAAGGAATTAAACTTTCTGCACAATAAATACTTTTTAGCGTCTGAAAAGCTTACTGGGTAAGCAATCGACGCATCTCAACGAAGTTACGCGGTTTTCAAGGATCGGAGGAGATGCGTCGATGAAGTTCAACACACTCTTCTAAAAATAAAATATATCACTTATGGTTGTCAAGTTTTTTACATAATAGGCGGTTTTGTTTCAAGATTTTTCAATCAAGTGCACAGGGCCATACAAGTTGCTTAGAGGCACAGAAATATCAGCTGTTGAATCGGATCACGTTGAGGAGGATTGTGTTGGCGATCGCCATAATAAGTAGGTCAACATAAAAAAACATAAAATACGATTCTTGCGATTGCTGAGTCCCAAGGGGACACGCTGCGCGAACGCTCCACTGCGTTTTGCTCGCAATGACATTTCACGTTTAATTAGGTTGAGC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTTAGGGGCGATGTAAGTGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.10,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 1177-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMEB01000037.1 Brasilonema bromeliae SPC951 NODE_824_length_32975_cov_8.657625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================= ================== 1176 37 100.0 35 ..................................... ACCTCATCGAACCGCAGCAACTGTTGCTTAAACCA 1104 37 100.0 36 ..................................... ATCTCTAAAGCCCTCGGTAGCCGCCCACAATAGGTC 1031 37 100.0 34 ..................................... TACTTAATGATTGAAAATCAAAACTCGCAGTTTT 960 37 100.0 33 ..................................... CCAATTCATAATCGACTCGCGGCGCAAGGGAAA 890 37 100.0 36 ..................................... ACCTCACTGAAACCGACCCCTGGGGAGACAGATATG 817 37 100.0 40 ..................................... CTGACCTTTCTCTTCAGCTTTAAGCCTTAACTTTTCTTTA 740 37 100.0 35 ..................................... AGCGAGTGGCAGCTTTTTTATTGCCTGATACAATA 668 37 100.0 34 ..................................... GTTTCGCAGGGGAGACATCGGGTGCAAACCATGC 597 37 100.0 33 ..................................... TATAAGACTTGTGACTATCTCTAGATCTATAAC 527 37 100.0 37 ..................................... TGAAACCTACTTGTTCTAGGTGAATGACTGCCAATGA 453 37 100.0 37 ..................................... CATACTCCCCCTCGTCCCAGTAGGGAGCAAGCCCAAG 379 37 100.0 35 ..................................... ACGGTAATTGCTGCGGCTCGTAGACCTGGCACTTG 307 37 100.0 57 ..................................... GAGTTGATTTGGTTTTCTTTCTGAACAGGACGNNNNNNNNNNNNNNNNNNNNNNNNN 213 37 97.3 34 N.................................... ATTTGGCAAGCAGCTTTTTTTGCACAAAAAACGA 142 37 100.0 32 ..................................... CGTTGGCATGCACATAAACTCCCAAACAGCTT 73 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================================= ================== 16 37 99.8 37 GTTGAAATTTCTCTTTCTCCCTATTAGGGATTGAAAC # Left flank : GTTAAGAGAAGATAGTGGTTTAGCGCTGATTTTGTTAGAAGATTTAGGCTTGCAGTTGCCAATGTTATTTAAACGTTCTGTGAAGTTGGGCGAACAGATGTTAGTGAAAGTCTTTCATGCTGATCCTCTTAGAGACGTCATTCAGTTTCAAGAAATTATTTATCAAGAAGCGCAACCTACGGCAAATTCAATGTAATTCCATGCTGTGCGCCTGCTGTTTTGGTAAAGATGGGTGGTCAATAACCTCGTGATAACATGATTTTCTTTGCCGATAGCGCGGATGGGTAGGTGTAGAAAAAAGGGTTAAGAAAAAAATGGTTGGATTGCTTACAGTACAAGGATTTTGGAGAATATTCGATGATAACCCATCCGCGCCCCTTGCCTAGACTGGATTTTAGCGATTTGCCTGTCAATCAATTTACTTTTTTCATGCTATCATTAGATCATCCGCGATTTAGAACCTTGAAAACTTTATATGGTGCAGTTTTCTGAGTACCTCC # Right flank : CGCCTAAAACGCGGTATAGGCGACCGAAGGAACCGAA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCTCTTTCTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //