Array 1 76296-76067 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHP010000012.1 Lachnoclostridium sp. 210928-DFI.6.3 JCHKAMBF_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 76295 32 100.0 33 ................................ ATGATTGGATGGTAGATAGAGATGAATTGTTGG 76230 32 100.0 36 ................................ TGAAGTGTCCCACAGTCACAATATAATGTGGGGCTT 76162 32 100.0 33 ................................ TAAAGAATAGAGTTGTAGCTTGACAGCATTCTC 76097 31 90.6 0 ..........................T.-..C | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 97.7 34 GAAACAACTCAGAAGAGTAAGCGGAGCAGAAG # Left flank : CAAGAAGTTGATAAGGAAGAGAAAACTTCTGCTGTATTGAAAAAGAAGATTAAAAAGCCACCTAGAAATATAGTATTTATAGATAATCCTGATATTGTAATTTGCTTTAGTAGGGAATTAACGAGAAATAATGATCCAAGATATGTTATTCTTAATAAGAAAACCAATGTTGTTATTGATGATGCTCAGGGGGTAGGATATAGGAGTATTTCAAAAGCAAGAAACTGTTTTAAAGCAAAAATAAAATGGTCACAAAAAATGACTAAGTAAATTGTATATATGATTATGATATGGTAGGAGGTCTGTCCCTACCAAGGAGCGCGAACATTAAGCACCCATAAAATTGCCGTGGGGTTCGCACTGCTGAATGAACATGTCAATATTATTCTATGCAGTAAAATTTGGCAATTTATGCAGGAATATGCCATGTAATAACTGTGCATTAATAAGAGTTGTGTTTTTTTCGCGAGTTGTACTTTGAAGAAATGTGCGGTTCTGCC # Right flank : AATTATCATAAAATTTTAACTATAATAATATAAAACCAGCCCGGCAATATACGTTGTCGGGCTGGCAGTGTATAAGCTATGCTGATATTACTCCTGAATCGTCATAACACGGCATTTTTTTCGGCAGAAGGAGATGCCATATTTTATTATTTTATTGAAACCTCGATTGCGAAGTTCCTGTGTATAGTTTTTATTTTTTATCTGATTTAAAGCTTCACGACAATCCAATTCAAGATCTCTTTCTTCAGAACTGTATTTGAGTTCAATCACAATTCCAAGTCCAATATTTGTATCGGTATCGTTTACTTCAATCATAATATCGCTAAAGCCATCACCGGACTCGCGGTTTGATAATACTTTCCAATCACGTCTATACCCCAGAATTCCAATCATAAGTCCGTGGTAGAAGTTTTCATGAAGCGATTTTGCAAAATTATCGCGCACACTAATGGTTTTTGACATATATTCTGTTAGAATTCGTTCAACAGCAGAGGCATTAC # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACAACTCAGAAGAGTAAGCGGAGCAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.20,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 122868-121360 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHP010000001.1 Lachnoclostridium sp. 210928-DFI.6.3 JCHKAMBF_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 122867 33 100.0 34 ................................. TTTTGGGATTTTTTTACCTTCGTCATCGGTATAA 122800 33 100.0 33 ................................. TCCGTCGTGTTTGGAAAAGTGATACAGGATGGT 122734 33 100.0 34 ................................. AATTAACTCAATTCCCTTTTCCTGCAAGACCTCC 122667 33 100.0 33 ................................. TGGAAATATCGGGCGGTCAGATCGGGAGCAGAC 122601 33 100.0 34 ................................. CCTTAGCGCTTCCGTATCTTCTTCATCTTCGCCA 122534 33 100.0 34 ................................. CACCCTGGATGTAATGACATAGCCGGTATTCTCC 122467 33 100.0 35 ................................. GCTACTGACATTAGCGGTGAAAATCTGGACAAAGT 122399 33 100.0 33 ................................. TCTAAGTCGTTTGCATATTCTGTATTGGTCTTC 122333 33 100.0 34 ................................. CCGCCTACAATTGCAGATATCCGCAAGCGGTGTG 122266 33 100.0 37 ................................. GTACAATCACGACAACGACGGTCAATACGGCCAGATC 122196 33 100.0 33 ................................. CACTTGCGCTTATTGCCATAGCCGACAACAAAA 122130 33 100.0 33 ................................. CTGGAAGCGTGATGCCAATCGTACCGGACGCAT 122064 33 100.0 34 ................................. AACTATCGTTAGAAGAAGAAAAGACGTTAAAATT 121997 33 100.0 34 ................................. AAAAACTTATCTCTTGTTTCTCGATCTTTTCTTG 121930 33 100.0 34 ................................. GTGACTCCATAGTACTTTCCCATCCCGGTATCAT 121863 33 100.0 33 ................................. TATGTATCTGTATCCATACTCATAGACTCCATG 121797 33 100.0 35 ................................. TCCTTTTTGTTTGCTTTCTTTTTTTGGTATTGCAA 121729 33 100.0 35 ................................. TTTTATAGCTCAGTTGAATATACAATTCGCCAAAC 121661 33 93.9 34 .........T....A.................. TCGGTATAGCTCTCCACACCGACATCCTGCTTCC 121594 33 97.0 35 .........T....................... ACGGCTAATGTGTAACGTGCAACTGCAAGCTTGTT 121526 33 97.0 33 .........T....................... CACCATTGCGCCGGCGCATCGGACAGATACTAC 121460 33 97.0 34 ...........T..................... TCCGTGGCCTGCTCCCTCGCCTGCTGCCACATGA 121393 33 93.9 0 ...........T....................G | C [121362] ========== ====== ====== ====== ================================= ===================================== ================== 23 33 99.1 34 GTCACCTTCCGCAAGGAAGGTGTGGATTGAAAT # Left flank : GAATTGATAGATGAAGAAAAAGATAGCTTGCGATTTTATTATCTTGGAAATAAGTATAAAACAAAGGTAGAGCACATTGGAATAGATAATGGTATAGCAGCAGATGAGGTATTAATTTTATAATGTGAGAATACAGAGACAAAATCATTCACTTTCGTGTAGTATATTCATTGAAACATTTTGTCTCTGTAAAAGAATTGAATATTGGCTATTTAGTAGTAATGGCAAAGATATTATTAAGGAAGTGAGCTTAGATTATTGACAAAATATTTCTGATATTTTAATTTTTTAGAGATGAAAAAGAAAGAATTAAAAATCAGGTGCGAATCGGAAGTGATATAAAAAAAGCTGGGAGATTCGCACCTGAAAATATTAAAAAATTAATTGAAAAATGCACAACTATGTGCTAGAGTGAAGAAAAGAAGCAAAATCTATAAGTAGGATAAAATATAATGCATAAAAATATGTATTATAAAAATTTAATTATAGATATTTTTGCA # Right flank : GTAAATGAGTATTTTGAGTATTGCGTCACATTCTGCAAATGGATCCAATTTCACAGATTTGATAAGGAAGCTCCGCCCCCATTTAGGGGCGATTTTGCGATGTAGCTTGAGATTATTTCGATCTTTCTTTCTGTATTTTGTTACAAAAATCAGATGAATCATCAATAGATTCTTATTGTGTCGTCTATGCTGATAAATAATTTTGAAGAAACAGATAAGTTACCAGTAGCGGTAGAAGAAGAGATGACTTATGGTAAAAAATAAAAGAGATGTTAGGTTCTATCCGTTTTTGACACTGAATGATAATACCAAAATTATACATTCGGAAGTACTAGAAAAAAATGGTGGCGAACAGGTTGAAGTTCGCATCAAAAAAGCAGTTAATGGAAAAATTCGTTCAGCATCTTGCTGGCTGCCTGATTATAGGTGGGAAAATATTGTTGGGTTTTCGGAAGTTGAAATTAAGTATTTTCAAGGATACCTAGAAACCATTGCTCACA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCCGCAAGGAAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 5591-5226 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHP010000045.1 Lachnoclostridium sp. 210928-DFI.6.3 JCHKAMBF_45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5590 32 100.0 34 ................................ GATTAAGCAGTTTAACATGGTAGGCTATACAGCA 5524 32 100.0 35 ................................ CCATGCATCTGTAGCAGAGTTGGTTAATGCGGTGT 5457 32 100.0 34 ................................ GTGATTGTGATATATCCATCTCTCTCCCAGGCAT 5391 32 100.0 35 ................................ CTTGATAGCTTGAATAAATTGTCTGCTTCCATCTG 5324 32 96.9 35 ...............C................ AGTGCACGTACATCTGGAAGGTTCAGACCTCCATC 5257 32 90.6 0 ...............CA..............T | ========== ====== ====== ====== ================================ =================================== ================== 6 32 97.9 35 GTAACAACTCAAGCCTGTGAGGGCATTGAAAC # Left flank : ACAGGCTCTGGAAACCGCATAAAACCTAGGTTTTTGAAGGGGTACCGTAGAAATGAGGTATAAGCCCGAGAGGGCATTGAAACCTTTCAAGCCGAGGGATATCGCATCAGAAATGTAATCCGGTAGAAATGAGGTATAAGCCCGAGAGGGCATTGACACCAGTTCGCATTCATCGCAATCGTATAAATATTCAGCGTAGAAATGAGGTATAAGCCCGAGAGGGCATTGACACACATTCATAGCTTCATCGCTAATTTCACCGGCAGCATTTGGTAGAAATGAGGTATAAGCCCGAGAGTAAGGTATTGGTGTTTGTTACCAGAAAAATGATGAAGGAGTGGTGCGAAAGGCAAGTTCCCAGAAAAGTACTAGGGGATTCGCACCTCAAAAACTTAGATAATTGGTTGAAAAAAATTGGAAGGTGTGCTAATATACACCTATAAATAGCAGGTATGAATAAAAAGTATCATGAAAAATTTAAAATATTGGACATTCTTGCC # Right flank : TGTTGAACACACTTTTTTCTCCTACAGTTTTACCAGATGAAAAGAAGAGAATTCTTAGCAAAAAATATAACATTGTGATGACGGTAGAATTGGAAAGTGAGGTGCAGCGTATGTGTAACTTGGGTACTGCTATTGTACAGAAAAAAAGTGCCTGTTCCCGGCAAAAAAATATACTGATATTAAGAGTAGAAAGTCGTTTTTTAGTGAGTAGAGCGGTGAAAGGGAAGGTGTTTATATGAAAAGAATATGGGTTATGACAGTAGGACTTTTACTGGGAAGTAGTTCTTCGGTATGGGCAGAGCAAACGAGCAGTACATCTGACTATTTAAAAAATATGAATCAATTGTATGAGTTTGCTTGGAGTTTACAATATACACAGGAAGGTCCATATGATATATGGCTTGTCCATGATGAACAAGGAATAACAAAGTCACAATCTAATTTTCCACAGTCTGTTTTGGGTTATCAGATAGAGGATTTTGATCAAGACAATCAAAAGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACTCAAGCCTGTGAGGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 6045-5793 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHP010000045.1 Lachnoclostridium sp. 210928-DFI.6.3 JCHKAMBF_45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================================== ================== 6044 26 100.0 50 .......................... GGCATTGAAACCTTTCAAGCCGAGGGATATCGCATCAGAAATGTAATCCG 5968 26 100.0 47 .......................... GGCATTGACACCAGTTCGCATTCATCGCAATCGTATAAATATTCAGC 5895 26 100.0 51 .......................... GGCATTGACACACATTCATAGCTTCATCGCTAATTTCACCGGCAGCATTTG 5818 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== =================================================== ================== 4 26 100.0 50 GTAGAAATGAGGTATAAGCCCGAGAG # Left flank : ACAGCAAAGGGTGTACAATCCGACAGGCAACTTGCGATTACTACAACCGTTCAAAAACCTCTATTTATAATCAAAAAGAGTCACTGACATTCGTGTCGGTGGCTCTTTTGCGGTAAGCGACGAATAACACCCCGGATTCCATGTTCTCCTCAACTGTGCCATAATTAGGAAAAAAAAGTGCCTGTCCCCGGCAAAAAAGTATAAACTTTATAAAAGTTCTATAAACAAAAGTATACATTTTGTGCAGAGGAGTCTGAGCAGCAGCACGAGAGGGTAGCGTGTTACTGCTCAGCTCAACTTATCAAGAGAGTGAAAAAATAGGATGACAACGGTTGTAATTAGTGCTATACTTAATTCAGTGTCAAGGGTAAGTACACCTCATTAAATATGTCCAAAATGTTAACATGCACGAAAAACGGCTGTTGTCAGAATATTCTGATAAATACCTGCAAAAACAGGCTCTGGAAACCGCATAAAACCTAGGTTTTTGAAGGGGTACC # Right flank : TAAGGTATTGGTGTTTGTTACCAGAAAAATGATGAAGGAGTGGTGCGAAAGGCAAGTTCCCAGAAAAGTACTAGGGGATTCGCACCTCAAAAACTTAGATAATTGGTTGAAAAAAATTGGAAGGTGTGCTAATATACACCTATAAATAGCAGGTATGAATAAAAAGTATCATGAAAAATTTAAAATATTGGACATTCTTGCCGTAACAACTCAAGCCTGTGAGGGCATTGAAACGATTAAGCAGTTTAACATGGTAGGCTATACAGCAGTAACAACTCAAGCCTGTGAGGGCATTGAAACCCATGCATCTGTAGCAGAGTTGGTTAATGCGGTGTGTAACAACTCAAGCCTGTGAGGGCATTGAAACGTGATTGTGATATATCCATCTCTCTCCCAGGCATGTAACAACTCAAGCCTGTGAGGGCATTGAAACCTTGATAGCTTGAATAAATTGTCTGCTTCCATCTGGTAACAACTCAAGCCCGTGAGGGCATTGAAAC # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.25, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGAGGTATAAGCCCGAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //