Array 1 23544-23909 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAEX01000049.1 Campylobacter coli strain MON348 1011600050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23544 36 97.2 30 T................................... GAAAGGTTAAAGATGAAAGTAGAATTAATT 23610 36 100.0 30 .................................... ATAATATCGGTTTTAAACCTTAAAAATATA 23676 36 100.0 30 .................................... AAAATCATTATAGGTTTTTCGCTTGTATTG 23742 36 100.0 30 .................................... TTCAATGAAACCACAGGAAAATTAGAATAC 23808 36 100.0 30 .................................... GATGGCATAGATTTTGATTTTTATATAAGA 23874 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 99.5 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Left flank : GAAGATTATTTTGCTAGGGTTGCTATAAACTGCGTAGCATTGTTTATTTTTATTTATGCTGCGGTAAACATTTCGATGACTATAGGATTTGCGCCTGTTGTTGGTATCCCGCTGCCTTTTTTTAGCTATGGAGGAAGTTCTTTTACGATTTTTATGATTTTCTTTGGAATTTTGCAGCATTTGATTACTTTTAGATATTTTTGGATAGATAGTAAAAATAAAATAAAATAATTTTAAGCAAAAATAAGATATAATTTTATCTTTAAAAATTAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCATTACTTTAAATATCTAATCTTAAATATGCATTAAACTATTCAAACTTTAAATAATATTTAAATCATTTGCTGTCACCATAAGACAAAATAGAAATTAATATTTTTTAAGTAAAATCTTTTATATATAGTGCTTTAGTTGATGATGAT # Right flank : GATGGCATAGATTTTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //