Array 1 9538168-9537836 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCQN01000001.1 Streptomyces sp. OK228, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9538167 29 100.0 32 ............................. GACGCGGCCGGCGTGCAGGAGAAGTACACAGC 9538106 29 93.1 32 .................A...A....... CGGATGCCGCCGCCCGCGAGGCGGACGAAGTA 9538045 29 100.0 30 ............................. ATCGGCGGCTGACGTGGCGTCCGGCGGTAT 9537986 29 93.1 32 C......G..................... TTTCCGCTCCACAGCGTCGTGTTGATGCGGCT 9537925 29 100.0 32 ............................. TCCTGCGGGGACTGCGCGAGCCCGTTGAACGT 9537864 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GTGCTCTCCGCGCCAGCGGAGGTGGGTCG # Left flank : TGGACGCCCTCAAACCCGGCCTCACCATCCGCTACCGCTGCACCGCAAGCCCCGTCCGCAAACCCGGCGCCACCACCCGCGCCCTCTACAGCCTCCCCGCCGTCGTCCCCCTCAACGGCCCCGCCGCCGACGAATGGTGGACCCGCCAAGCCGACGCCGCCGGACTCAAACCCCTCACCCTCCACCCCCACCCCCTCGACGCCGCCCAAGGCGTACGAACCAACAACGGCAGCAGCGAGAAACAGCGCATCCGGCACAACCGCACCCGCTTCGACGGCTCCGCCGCCATCACCGACCCCGACCTGCTCCGCCAGAAAATCACCGAAGGCATCGGCCGCGGCAAGGCATACGGCTGCGGCCTCCTCAGCATCGCCCCCACGCGCGAGGCCCCGTGAACACTGCAGCCACATCAGCAACGCAGCTGAACCACGCTCACGCGCGGCGCAAACTCGCCTCCCCCACCGTCGCCATGCTGCCGCGCATCGCCGATTCGCTGTCCT # Right flank : TTGTCGGCACATGGACCGGCCGAACAGCGTGCGTGCGCTAGCGGTGGGGAGGCTCCTGAGGTGGCGGCGCCCACCCGTGTCTCGACTGGTCCGCCTACTCGCTAGAGGCACAGTTCCGACACGGATATTCCACAATCCCTACCTCAACAGGGATGATTCATTGCTCAACCATGCAAGTCCTTGGGGGGACTATGAGCTACGACGTCACGCCGCCGACCATGCCGGCCTACCCGCCGCCACCGCCACCGCCACCGAAGAAGAGCCGCACCAACCTGGTCATAATCGGATCCGCCGCCGCCGTCATCGTGGCCGTAGTCGCCACCGGCGTCACGGTCAACAGCAGCGGCAACAACGAAGCGAAGCCGGGGCCCACGGTCACCGTCACCGAAACCGCGACCGCCGACGACACCGCTGCCGCAGCCGACGACGGCACCGAACCGGCCGCCGAAGACACCAGCGACGGCGTCTACGCCCTCGACGACACGGTGACCTACCAGAAC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCCAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9546622-9547931 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCQN01000001.1 Streptomyces sp. OK228, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 9546622 30 90.0 31 ..........T.....T............T CCTGCGGGCTCTCGGCGACGCCGTTCCACGT 9546683 30 93.3 31 ................T............T CCGCTCAGGGCTTGGTCAAGGGCTTGCAGTC 9546744 30 96.7 31 ................T............. CCTGCGACGCACTGGCATATGCCGCAGGGCT 9546805 30 90.0 31 ................T...A........A TGAGCAGCTGGTACTGGCCGCCCTGTCGGCG 9546866 30 93.3 31 ................T............A CGACCCCGGTTGTACCCCCACGTATCGGTGT 9546927 30 90.0 31 ................T....T.......T AGGTGTCGACGCTCTCGACGATGAAGTCCAT 9546988 30 96.7 31 ................T............. CTTGGCGGGTGACCTGTGACCGCGGGCGGGC 9547049 30 93.3 31 ................T............G CATCCTGCCCCTACCCGTACCGAAGCGGCGG 9547110 30 90.0 31 ............T...T......A...... AGATGCTGCAGCTCGGCATGCGCAACCCGCA 9547171 30 96.7 31 ................T............. TGCCGCCCGAGACCCGCAAGGCGGCGGCCGC 9547232 30 86.7 31 ............AG...A...........G GCGCTCAGGCGTCGTCGCAGGGCGCGTCGAA 9547293 30 90.0 31 ..........T.AG................ ACTAGGTGACCCCCCACATGCACCAGCCCCC 9547354 30 86.7 31 ..A..........G........C......G TATTTGCCGGTGAGCAGTCCCAGGCCTAGAG 9547415 30 93.3 31 ..G..........G................ TCCCCCTTCCCGGGCTCCGCACGCTGCGCGA 9547476 30 90.0 31 ..G..........G...............A AGCTCACCCTGTACAGCGAGATCCCCAACGA 9547537 30 90.0 31 ..G..........G...............T TGGAGGGATCGGCGAGATAGCCGACCTCTAC 9547598 30 100.0 30 .............................. CCCGGTCAGCGGGGCGCGGCGAGACTGGGG 9547658 30 100.0 31 .............................. TCGGTATGGGGATCATCGGAATAGGCATGGC 9547719 30 90.0 31 ..................A.....G....G CCGCGGGGTCTGCGGGGAAGACCACCGCGGA 9547780 30 100.0 31 .............................. GTGAGAGTTGCATATATGTGAGCGACCTGTG 9547841 30 96.7 31 .............................G TGGGGAACGACAGCGCGTCCACCATGACGTC 9547902 30 83.3 0 ..G.........TG...........G...G | ========== ====== ====== ====== ============================== =============================== ================== 22 30 92.6 31 GTCCTCTCCGCGCAAGCGGAGGTGAACCGC # Left flank : TCGCTCCCTACGGCCGCGAACGCCCCCGGAACCTGGGCCTGGAACGGAGGAGTGATCTTCCCCAGATCGTGCAACCCCGCCCAGAAAGACAGCACCCGCCGGGCCTCGGCGACGGTCAGCCCCAGCGCCCCGGCGACCTTCTCACGCACCTGATCACTCAGCAGCACATCCCACAGGGCACCGAACACCCCTGCGGTGTCCAGCAGATGGCAGAGCACCGGGTACGGACGCGGAAGACCGTGCTCCTTGCCCCAAAACCGGGCGTCGACCGGGACGTGTACCGGCGAGACGGACTCACGCTTCATCATGACGGCCATGCATAACAGGCCCCACTGACAATGCGTCCCCACGTGCGCGGAGACCAGAGCGGATCCGCAACAGGGCCGTAGAATCTAAGCCGTGGAATCTCAGCCGGAGCATGGGCAGGCCCATTCGGGACGAGTCCACTCGGATAACGCAAAGAATTCGCAAACCACCTGAAGATGGCCGGGTCAGGAAGT # Right flank : GCTGATCGGATGTGTCGGACGTGATTGGAAGAGGAGCCTCTGCGCGCTGGAAAGGCACTCCCGCTGCCCTGCTGTTTGGAGTGGAGTCAGCGAATAGCGGTGACCAGCGCCCTTGTGCGAGGGCGAGCGGCATAGCCATCCAATTGCCTTATGAGGGTCCCCCTAGTGGCCTGTAGGGGGCCCGGACGGGGCCTGGGTGCCTGCAAGGGGCCGGAACGACCGGGAGAGATCAGGAAGGGCCTGAGTGTCGCCGTATAAAGACATGACCCTGACGCGTAAATAGGTGCACGTCAGGTTGGGTGTGGGCAGCGCTGGGTGCCCGGTGGCCGTGGGGTCACCGGGTGTCTGGGCTGCCGGTCAGGCTGCGTCTGCGTCGTCCCTGGGGTTGAGGGTGACGGTGTAGCCGAGCTGGTTGAGCTGGTTGATGGCGCGTCGGGTGGCGCGTTCGGGGTCGCGCTGGGTGAAGTAGGTGCCGCCGAGCTCGTGGTAGGGGACGTTGT # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCAAGCGGAGGTGAACCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //