Array 1 20145-20776 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 20145 36 97.2 30 ..................................T. CTCAACTTCTTTCTTGTTTATAGACTTCTT 20211 36 97.2 30 .G.................................. TAAAAAATAAAGGGACTTTGTCCCTATTTT 20277 36 97.2 30 ...........................A........ TTTTACAATCTCAATGTCTCAAAATGCTGA 20343 36 100.0 30 .................................... TTTTACAATCTCAACGTCTCAAAATGCTGA 20409 36 100.0 31 .................................... TTTAAAAATTTGGCTTCCATGTTTTGTTTTA 20476 36 100.0 31 .................................... TTTAAAAATTTTGCTTCCATGTTTTGTTTTA 20543 36 97.2 30 ............................C....... AAACCTCTCATCATACTTTTTACTTCTAAT 20609 36 100.0 30 .................................... AAAAATTGTGGAAATTAAATTGGTTTGCTC 20675 36 97.2 30 ............................C....... AAACCTCTCATTATAGTTTTTACTTCTAAT 20741 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 98.6 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : TTGTGTTGTACAATTTCTTACTAGAGTAAAACAATTTATTTAATTCTGTTGGCGAACTGTTGGTTTTTGTGCTGTACAATTTCTTACTAGAGTAACACAATTTATTTAATTCTGTTAGCGAACTGTTGGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTAAAAAGCGAACATCTTGCACCTGAATATTGTTTTTGTGCTGTACAATTTCTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTTCTTTCTTGTTTATAGACTTCTT # Right flank : CAAACCTCTCATTATACTTTTTACTTCTAATGTTTTTGTGCTGTACAATTTCTTACTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : GTTTTTGTGCTGTACAATTTCTTACTAGCGTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 22320-22686 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 22320 36 97.2 31 ..............................G..... TAATTATTTGCCCTAATTGGGCCAAACTTGT 22387 36 100.0 30 .................................... ACCTTATATTTTTAATAATCAGTATTATAT 22453 36 97.2 30 ..............................G..... ACCTTATATTTTTAATAATCAGTATTATAT 22519 36 100.0 30 .................................... GCGGACTTCCACCTTTTTTAAACGTGTGCA 22585 36 100.0 30 .................................... GCGGACTTCCACCTTTTTTAAACGTGTGCA 22651 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 99.1 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTGCCCTAATTGTGCCAAACTTGT # Right flank : CTTGTAAAAAATAAAAATATGGTATAATATAGTTTTTGTGCTGTACAATTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTTGTTTGTCCATATTTTTCCTGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTAAAAGGTCTAAATTCCAGTCCAACAGTTCGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTAAAAGGTCTAAATTCCAGTCCAACAGTTCGTTTTTGTGCTGTACAATTTCTTACTAGCGTAAAACCTCTCCTTTGGTTTGTCCCATATTTTGCCTGTTTTCGTGCTGTACAATTTCTTACTAGAGTAAAACCTCTCCTTTGTTTTGTCCCATATTTTGCCTGTTTTTGTGCTGTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGGAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 3 23865-24230 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23865 36 100.0 30 .................................... GGTTTTTCTTAAAAAAATGCTCAATTACAT 23931 36 100.0 30 .................................... GGTTTTTCTTAAAAAAATGCTCAATTACAT 23997 36 97.2 30 ..................................C. AAGTGGGTAGTGTCCTACCCACGAACCCGC 24063 36 100.0 30 .................................... AAGTGGGTAGTGTCCTACCCACGAACCCGC 24129 36 100.0 30 .................................... CCTCTGTCTCCTTTTTCGCCTTTAAGTTGT 24195 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 99.5 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTTTTTTTGTAAAATAAATATACC # Right flank : CCCTCTGTCTCCTTTTTCGCCTTTAAGTTGTGTTTTTGTGCTGTACAATTTCTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 4 25042-25409 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25042 36 100.0 31 .................................... GTATTATTACTAAAACCGAATATGCAGCCTT 25109 36 100.0 29 .................................... TTTATCTTGGTATAATAAACAAAATAGTC 25174 36 97.2 31 .................................C.. TCAATTAGTGATTCTGCGAATTTCATTTCTC 25241 36 100.0 31 .................................... TCAATTAGTGATTCTGCTAATTTCATTTCTC 25308 36 97.2 30 ..............................G..... ACCGAAGGTGAAGCAAAAACATTATCTAAG 25374 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 99.1 31 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTACTAAAACCGAATATGCAGCCTT # Right flank : CACCGAAGGTGAAGCAAAAACATTATCTAAGGTTTTTGTGCTGTACAATTTCTTACTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 5 26210-26511 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 26210 36 100.0 31 .................................... ATTTGCTGAACTCTTAGTTTTTTTAAATCCA 26277 36 100.0 30 .................................... ACGCGAGCGAATGGTAAGGCGGCAGACCAC 26343 36 100.0 30 .................................... TCCTGAGTCAAAAAAACCAAAAAATAATTA 26409 36 100.0 31 .................................... ATTTGCTGAACTCTTAGTTTTTTTAAATCCA 26476 36 80.6 0 .............................NNNNNNN | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 96.1 31 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATAGCAGGCGGCACAGCACC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [15.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 6 27414-27911 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27414 36 100.0 30 .................................... TTCATAGTAAATTCTTTTTGCTTTAATTTT 27480 36 100.0 30 .................................... TTGAGAATTAAAAAAATTATTTGCCCAATA 27546 36 97.2 30 ..............................G..... TTCATAGTAAATTCTTTTTGCTTTAATTTT 27612 36 100.0 30 .................................... TTCATAGTAAATTCTTTTTGCTTTAATTTT 27678 36 97.2 30 ..............................G..... TTCATAGTAAATTCTTTTTGCTTTAATTTT 27744 36 100.0 30 .................................... ATAAAAATTTTATTTTTATGGTATAATTAT 27810 36 100.0 30 .................................... GTACTTTTCCAAAATTATACTAGACAGCCT 27876 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.3 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGAAGACGACTCTCAATTTTCT # Right flank : CGTACTTTTCCAAAATTATACTAAACAGCCTGTTTTTGTGCTGTACAATTTCTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGACTTCCAAATCGGCGCCGACAAGTGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACCCCCACAAGAGAGGCATTTGCTCAAAGACTAGTTTTTGTGCTGTACAATTTCTAACTAGAGTAAAACCCCCACAAGAGAGGCATTTGCTCAAAGACTAGTTTTTGTGCTGTACAATTTCTT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : TGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACGTACTTTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.11%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 7 28254-28687 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 28254 36 100.0 31 .................................... CCCCACAAGAGAGGCATTTGCTCAAAGACTA 28321 36 97.2 31 ......................A............. CCCCACAAGAGAGGCATTTGCTCAAAGACTA 28388 36 100.0 30 .................................... TTCATTGTAGTCAAACTTGATGATCTTCAA 28454 36 97.2 30 ................................T... TTCATTGTAGTCAAACTTGATGATCTTCAA 28520 36 100.0 30 .................................... ATTGAATAGACTCTTGTTGTTTTTGGAAAT 28586 36 100.0 30 .................................... TAAAAATAACAAAAAATAATGTCTCTCGAG 28652 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 7 36 99.2 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : TGTACAATTTCTTACTAGAGTAAAACATAAAAATTTTATTTTTATGGTATAATTATGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACGTACTTTTCCAAAATTATACTAGACAGCCTGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACGTACTTTTCCAAAATTATACTAAACAGCCTGTTTTTGTGCTGTACAATTTCTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGACTTCCAAATCGGCGCCGACAAGT # Right flank : CAAACACGAGAGTGATATAAAAAATAATATAGTTTTTGTGCTGTACAATTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAAATAATGTCTCTCGAGGTTTTTGTGCTGTACAATTTCTTACTAGAGGAAAACTAAAAATAACAAAAAATAATGTCTCTCGAGGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTGTATTTTCGTCGTACCAATCGCGAGTTTCGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACGTCAAAAAAACAACCTCATAGTCATTAAATGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTATTTACAAAATAAAGTTGACCAAAACATAGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACGTCAAAAAAAACAACCTCATAGT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 8 28864-29230 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV766018.1 Mycoplasma ovipneumoniae strain TC5 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 28864 36 97.2 30 ..............................G..... TAAAAATAACAAAAAATAATGTCTCTCGAG 28930 36 100.0 30 .................................... TGTATTTTCGTCGTACCAATCGCGAGTTTC 28996 36 100.0 30 .................................... GTCAAAAAAACAACCTCATAGTCATTAAAT 29062 36 100.0 30 .................................... TATTTACAAAATAAAGTTGACCAAAACATA 29128 36 100.0 31 .................................... GTCAAAAAAAACAACCTCATAGTCATTAAAT 29195 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 99.5 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : AGAGAGGCATTTGCTCAAAGACTAGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTTCATTGTAGTCAAACTTGATGATCTTCAAGTTTTTGTGCTGTACAATTTCTTACTAGAGTATAACTTCATTGTAGTCAAACTTGATGATCTTCAAGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACATTGAATAGACTCTTGTTGTTTTTGGAAATGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTAAAAATAACAAAAAATAATGTCTCTCGAGGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACAAACACGAGAGTGATATAAAAAATAATATAGTTTTTGTGCTGTACAATTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAAATAATGTCTCTCGAG # Right flank : CGTCAAAAAAAACAACCTCATAGTCATTAAATGTTTTTGTGCTGTACAATTTCTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //