Array 1 71535-66316 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOFV01000013.1 Oerskovia turbata strain NRRL B-8019 contig13.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 71534 29 100.0 32 ............................. TGCACCTGGTCGAGGAGATCGACTACGAGTAC 71473 29 100.0 32 ............................. ATGCTGAAGTCGCCCGCGCATTACAAGCACTC 71412 29 96.6 32 ............................G GTCAAGACCCGAAAGTCCAACGGCTCCTCGAA 71351 29 100.0 32 ............................. TCCCACGGGTCGGCCTCGGATGCCTCGAGCGC 71290 29 100.0 32 ............................. GTCAAGACCCAGGCCAAGGACACCGGCAAGGC 71229 29 96.6 32 ............................G ACCCAGCGCGTAGCGGCGAGAGCCAGGTCCTG 71168 29 100.0 32 ............................. CCGTGGCTGAGTACACACCCAGCACCGAGCAG 71107 29 100.0 32 ............................. CTCAGACCGAGGAATTCGACTGTTCGGCCACA 71046 29 96.6 32 ............................G TGGGTGAGCGCGGGGCGCTCGTCGGGGCCGGG 70985 29 96.6 32 ............................G TCGCCCGGGACTCGACTCCCGAGGTCGACAGA 70924 29 100.0 32 ............................. TTCAGGACGCACGTCCCGGTGGCGACGACCTC 70863 29 100.0 32 ............................. GACGGGTCGTGGACGGGCGCAGACCGAACGCG 70802 29 100.0 33 ............................. GGTGGCCACCGCGACACCAAGGCCACCGCCTGC 70740 29 100.0 32 ............................. GCCCCGGCTGCTCCCCCTGCCTGCCGGGGCGT 70679 29 96.6 32 ............................G CTGTCCCTGCCCCCTCGACGCCGTGCGAACAC 70618 29 96.6 32 ............................G AGATCCCCGCCGGCACCCGCATCTGACCATCG 70557 29 96.6 32 ............................G GAGGACCGGTGGCCCGTGCGGGCCTGGTACGT 70496 29 100.0 32 ............................. ACCCGGTCACGAGCGCGACGCAGCACCCGGAT 70435 29 100.0 32 ............................. CGGCTGTCACGGGGGGCCTGGTGTGGGTTGGG 70374 29 96.6 32 ............................T GGCTTGATTTCAAGGGAGTTGCCGTAGGGGCG 70313 29 96.6 32 ............................G GCCGAGCACAGCGCGGCGACCGTGGCCACGAC 70252 29 96.6 32 ............................T CGGCCGGATTCGCAGCCCGGCGCGTTCTGGTG 70191 29 100.0 32 ............................. GGGAAACCGTCAGCAACCGTGAGGTTGAGCCA 70130 29 100.0 32 ............................. CCCTACCTCGGGTCTAACCTGCTCGTGCCGAC 70069 29 100.0 32 ............................. CGCTCGTCGTGGCCGGGACCGTTCGGGCACGC 70008 29 96.6 32 ............................G CTCCCGGCCGGCGCGCAGGTCTCTCCCCTCGC 69947 29 93.1 32 ..A.........................A GGCTCGCAGGCCGCCGGCGCGCTCTCGGGCCT 69886 29 96.6 32 ............................G GAAGCCATGTCGCTCGGCATCGACTCCTACTC 69825 29 96.6 32 ............................G TCCGGCGTCAAGCAGGTGTTCATCGACCACAA 69764 29 96.6 32 ............................G GTCTCCACGCTGTGGATCGACACCACGAGCGG 69703 29 96.6 32 ............................G CGCGGCTTCGACGCCGCGGACGAGACCGACAC 69642 29 96.6 32 ............................G TCGTCGCCGGCGGTGCCGATGATGAGCTCGAC 69581 29 96.6 32 ............................G GTCGTCCCGGAGCAGCTGCGCCTGAGCGCGGG 69520 29 96.6 33 ............................A GCTCGTGCTGTAGAGCCATGCCGGGACGTCGTC 69458 29 96.6 32 ............................G ACGTGGATCGCCGACGGACGCTCGGCCTCCGA 69397 29 100.0 32 ............................. GTCGCCTCGAGGCCGCGCGAGGTCTCGACGAT 69336 29 100.0 33 ............................. GCCCTCACTGCCGACGACGTCTTCGGTGCCGAC 69274 29 96.6 32 ............................G ACCACCGGCGACGACGCCCGCACGCTCGGCGA 69213 29 100.0 32 ............................. AACGTGCACAGCGCCGGCCTCCGATTCCTGGC 69152 29 100.0 32 ............................. CGAGGGGATGATGCGGAACCCGCCGGCGCTGC 69091 29 100.0 32 ............................. CCATCGGGCAGAAGGGCGTCGCTCACGCCGTC 69030 29 96.6 32 ............................G GTCGGCTACGACGTCGCCCGCGAGACCTCACA 68969 29 100.0 33 ............................. CACTCGCGCTGGGGCTCGGGCACCAGGGCGTAG 68907 29 100.0 32 ............................. TGGACGTTCGTCCAACTGTTGTCCACGTGCAT 68846 29 96.6 32 ............................G TAGTCCACGACCGCGCCGTTGGCCTGTATGAG 68785 29 100.0 32 ............................. GTCCGGGTCTCCATGGACCCCTCGTCCTACAT 68724 29 100.0 32 ............................. GGCGCGTCGGCGGGAGCAGTGGCGGGAGCGTC 68663 29 100.0 32 ............................. TGGAAGAGCAACGGCCACCACAAGCGCTCCGC 68602 29 100.0 32 ............................. GCGGCTACAAGCTGTACGCCTTTGCGCCAGTC 68541 29 96.6 33 ............................G ACCCACGCGTTTGGTGCCTTGCCCGCCGTGTGC 68479 29 100.0 32 ............................. TCGTCGGGGGTGACCGAGACCAGGGATGCGGG 68418 29 100.0 32 ............................. CATCAGCGTTACCGGGTCTACAACCTCCTTAA 68357 29 100.0 33 ............................. GACGGCGGCCTGCACCTCGGCGATGGCGCGGGA 68295 29 93.1 33 ...T........................G GGGCGCCACCTTGTCACGTTCGGAACGAGTCGG 68233 29 100.0 32 ............................. CTCTTCACGAGGAATGCGCCCTTCCCACTCCT 68172 29 96.6 32 ............................G TACGACGCGGCATGGGCCGCTGCGGACGAGGT 68111 29 96.6 32 ............................G CCGGGTAGGGGTCAGCCGTCGAGCCGTCGAAG 68050 29 100.0 32 ............................. GCCGGGTCTGGCACCTGGCGCAGCCCCTGTCC 67989 29 100.0 32 ............................. CCGCCGCGGACGTGAATCCCTTGGACCCCTGG 67928 29 96.6 32 ............................G CCCGGCTCGAAGCGCTGACCGCCCCGGTGTCC 67867 29 96.6 32 ............................G CCCGGCTCGAAGCGCTGACCGCCCCGGTGTCC 67806 29 96.6 33 ............................G TGCCGCGACCTGCCCGAGTCGTTCCTCGCCGAC 67744 29 96.6 32 ............................G TAGTCGCGGAACTCGTCGGACGCGAACCGCAT 67683 29 96.6 33 ............................G TCACGGGGCATGACCTCCTCGACGGCCGCGGCC 67621 29 100.0 32 ............................. AGGCGCCACCCGGTCAACGTCGGGAAGATACC 67560 29 100.0 33 ............................. CTCGTCGGCGCGACCTGCGCCGCCGAAGACTGT 67498 29 100.0 29 ............................. CTTAGCGATTCCGCCACCGATGCTGTTCC 67440 29 96.6 32 ............................G AACCGGGTCGGCACGGCGACCGTCCCGTACTC 67379 29 100.0 32 ............................. GCGGGAGAGCTCGGCGCGGTTCTGGACCCGGA 67318 29 100.0 32 ............................. TCGCATGCTCTGGGCTCCTCAGAAGATCTGGA 67257 29 96.6 33 ............................G GACCAGGACGCCCAGCTGCGCGAACTGCGCGGC 67195 29 100.0 32 ............................. GAGCCGGTCGGGCGCATCGCCGCCCAGCGCGA 67134 29 96.6 32 ............................G CACGCGAGCACCGCGGCGCTGACGGTATCGCC 67073 29 100.0 32 ............................. GTCACGCGGGTCTCATCCGGCGGGGTGAGCTC G [67056] 67011 29 96.6 32 ............................G GACCTCAAGACCGCGATCCGCAAGGAACAGCG 66950 29 96.6 32 ............................G TTCAGGACTGCCTTCCCACTGGGCGTGAACTT 66889 29 96.6 32 ....G........................ AGCCCGACCAGGCCGATAACGACCGGAAGAAT 66828 29 100.0 32 ............................. CACAACCCCGGCAGCGTGACCTCAGGGGGCTG 66767 29 93.1 32 ...............A............G TGCGACGCCTCCACGACCTCGCGGGCGTACCC 66706 29 96.6 32 ............................G GTAGGTGTCAAGCGCTGCAACACAGTCAAACT 66645 29 96.6 32 ............................G GTAGGTGTCAAGCGCTGCAACACGGTCAAACT 66584 29 100.0 32 ............................. CACCCCGAGACGGACCACCTGCAGGCCGACAT 66523 29 96.6 32 ............................G GCGGACCTTGTCGACGGCGGTGGGGTAGTCCG 66462 28 89.7 32 .C...................C-...... TCTGGCCGTTCGGTGGTGGCGGTCTGGGGTCG 66402 28 79.3 30 ...........A..G...T...-..G..G GGCCCGATGGTGTCGTCGCGCACCGCTTCT 66344 29 72.4 0 CC.......T.A......CA.....C..G | ========== ====== ====== ====== ============================= ================================= ================== 86 29 97.5 32 GTGCTCCCCGCGTGAGCGGGGGTGATCCC # Left flank : CGTGGCCAGCGGGGGCGCCAGCTACCTGATCGAGGGCGGTTCCCGTGGTGGTGAACATGACGGGCGACGAGGGTTGGTTCGGGTACAAGTCGCTCGACTCGCTCGTGGGCGACGCCTGGACCCAGTTCACGGGGCTCCACGACCAGGACTACCACGAGGCGCGGGAGGCCCATCAGCCGCGGAACCGGACAGCGACAGCAGCCCGACGCCGGTCGGCGCCTCGACACTATCGGCTGGTGAGAGCGGGGACTTCGACGACGAGGACGAGAACCGCCGCCGACTCCCCCGGCTCAAGGCGCTCTTCTCCCTTTGAAGACCTGGACGACGATGCTCGTGCGGGACTGCCGCCGAGCGGGAGACCCGCGACGCATGTGCCATACATCAACGAGGGCGCCTCGTTCGTCAGTTCAGGAAATGTGAGCGGAGGCCCGTGCATGGTCGCCGCCGGAGAAGTGAAGGCAATACGCTGACAACGGCGGTAAAGTCGCAGGTCAAGAAGA # Right flank : AGTTCTCACCGCTTAGCCACCCGCGGCCGCCCCCAGGCCGCCACCGCCCCACGAGCGCACCTGGATTTCAGGCGTCCTCGGTGGACGCCGGGACCAGGCCTCCGAGGGCCGCTGCGGCGGCGCCCAGGACGAGTCCCACGCGCAGGTGCGGGGCGCGCACCCCGCGGGCACGCATGCGCTCGCCCCAGCGGTACGCGCCCTTCTCCCCGACGACGGCGAACGCGGTCGTCGCCCCGAGGACGACAGCCGTTCCGACGGCGATCGCGACCTTTCCGCCCGGGGTGATCTCGACCGGCGTGAGGGTGTACGGCGTGTTGTCCGGGACGTCTTCGTCGGACGTCTGCTCCCAGGGCGTCGTCGTGCCTGCGGCGACCTCGGAGCCCTCGGTGTCACGCAGGGCGTCGCGGACCTTGCGGACGCCGTCGATCGCCTGACGGCCCTCGCCGGTCCGGAGCAGCACCGCAGCGCCGGCGACCCCGCAGGCCGTCTTGAGGAGCGCC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.67, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [31-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //